Basic Information

Insect: Bombus bifarius
Gene Symbol: HIVEP2
Assembly: GCA_011952205.1
Location: NW:595094-661780[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 7.7e-05 0.0049 16.5 0.5 1 23 114 136 114 136 0.98

2 8 0.011 0.68 9.8 2.1 1 21 142 162 142 166 0.86

3 8 0.043 2.8 7.9 0.1 1 21 364 384 364 385 0.94

4 8 7.8e-07 5e-05 22.8 1.6 1 23 915 937 915 937 0.99

5 8 8.6e-06 0.00055 19.5 4.3 1 23 943 967 943 967 0.92

6 8 1.1e-06 6.9e-05 22.4 0.1 2 23 1376 1397 1375 1397 0.97

7 8 0.00042 0.027 14.2 1.8 1 23 1403 1427 1403 1427 0.92

8 8 0.00072 0.046 13.5 3.3 1 23 1448 1472 1448 1472 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	7.7e-05	0.0049	16.5	0.5	1	23	114	136	114	136	0.98
2	8	0.011	0.68	9.8	2.1	1	21	142	162	142	166	0.86
3	8	0.043	2.8	7.9	0.1	1	21	364	384	364	385	0.94
4	8	7.8e-07	5e-05	22.8	1.6	1	23	915	937	915	937	0.99
5	8	8.6e-06	0.00055	19.5	4.3	1	23	943	967	943	967	0.92
6	8	1.1e-06	6.9e-05	22.4	0.1	2	23	1376	1397	1375	1397	0.97
7	8	0.00042	0.027	14.2	1.8	1	23	1403	1427	1403	1427	0.92
8	8	0.00072	0.046	13.5	3.3	1	23	1448	1472	1448	1472	0.93

Sequence Information

Coding Sequence: ATGACGACAGAGACTCACACTGTGGCGATGACAGACCCACAGTTAGcaaacaacaacaacaataacaacaccaacaacaacaacaacaacaacaacaacaataacaataacgaTGGCGAGCCGAAATACTTGCACAAGAAGTTCAAGAAGATGGCGACGACCGAGGTTACGCCGCAAGTGGAGCCCAAGGAGGACGCCGTGGTCAGCAACGGTTCTCCAGAGACAACTAAAAGGAAGGAGTCGGCCAAGGACTCCAGAGAGTCGCCGAAAGATCCGATCAAGATCGAGATCTCTGCGGAACCCGCGGACGGAGAACCGACCGAATCGAGGAAAAACGGCTACGTGTGTCCTTATTGCAGACTGTCGTGCGCGAAACCGAGCGTCCTGCAAAAACACATCCGAGCTCACACCAACGAGAGGCCGTATCCTTGCGTTCCTTGCGGATTCGCGTTCAAGACCAAGTCGAATCTCTACAAGCACTGCAGATCCCGTGCCCACGCCCTTAAGATGGAGGGTGGTGATGCCAGCAAAGTATCGGAGGACTCGGACATAAGCTTGTCGGACAGTGCGAGCAATGGAACCGGCACACCACCACCTCCTCCGTCATCGACGCCCACGACGACTTCAGTTAGTGTAAAAACGATTAAAACGGGGAAAATCTACAAGCCAAAATTTCACACGGCCCTCCAATGTGTCAACAACGATATCGAAACGTCTTCCCTTTCCTCCATTTCTTCCACGAACAGTTCTTCCTCGACAGCCGCTACAACCACGCCGAAACCAAACCCAGAGCAAGTACAGGAacatattgataaaattattaccgACAACCAAGCGATCGTCGATGCGGTAGATCCGCGACTGCACAAACTGATTCAAAGACAGCAAAGCCTCGTGGAAACGAAACAATCTACCGATCAGCCGTTGAATCTCTCATCCGCGGAGGAATCTTCGAGAAAACGATGTTACAGTGAGAGCTTTGTGCAAGAAAGTAAAGATTATCCGAACGGTCCGGAAAGTTCGATAATCAAGGATCTCCTATTGAAAAATCAAAACTCGAATCAAGAGGGAACGACGGAATACGAGAGCTATTTTTGCCCTTCCTGCAATATCCCTTACTCAAGTATCGATAATCTCGACGTTCATCGTAAGTACTACTGCAAAGGCAGCGTGAGTCCTCGAAGAGATTATCAGTTGGAAATGGAGAAAAGAGAGTCGGATTTTGATTCCAAGTCTTCCGAATATTACAGCACCTTGCAACCCCTTCCCTCTCCCGGGCCTCTGTTGGGCAATACGAGGCTCGTCGACGCGTACGCCCCACCCATGAAGAAACAGAGATCGGACCCCGTACCAACCACGTTACGATCTCTCGAGGAGCTAAGCAAGTATCCACGACCAAACTCGTTGCAAATGTTCGGCGGGGAAGTCAGGATATTGGACAATACCGGTGAAACGAAGACGATGAGAATCGAGCCGCGACAAACCAACTCTCCTACGAGCGAGCAGATCGTGAGCAGCAAGTGCGTTACTTCGGAGACCGCTTCGATCGTGGTTAGATCGGGTCTGCACTCGGGAGGCACGATGGTACACAAACCACCGCGTACGGCGGCCAGCACGCCTAGTTCCTCCATATCTTTGCCCAACACTCCGAAAATGTTGGCGCCGATCATACCGAACATATCAACCTCGAATATAGCACCCAACATGTCGTGCTACAGTTATCTAGAGCCGAACTTAAATCCTCTGACCAGTATCACTGCCTATAACCCGCTGACTTTGCCTCAACCGGGAATCACGAATATCCTTCACGGTGGTAAAGTTATACCTTATGTTCCTGGCATGCCTGGACCACACACCCTGACGCCAGCCATAGACATATCCACGAGTTTAGCCACCGATGAAGCCGGATACAAGGTGATACCAGGATTGCCTGGCCTCCACATAGTCCCTCAACCCTTAGATCTCGCCAGTCCGGTAAAAATACAAACGCCAAGTACAAATACCAACGCCACCAAGATACAAACGCCAATAGCTGGAATTCCAGAGCCGATGTCCAATGGACACGTCTCGATGATAGGCCAGCCATTGGACCTCGCCAGCCCGGCAAAGGACCCCAAGCTCGGCTTCAAAACTCCTGGCAACGATGTTTTGAAGATCGGATTAACGAGCCCAAAAGTTCCTAGCGTTACCGAGACCTCGACGAGACTTCGCCTCAAGTTCTTGAGGCCGACTTCGTTGCCACTAAAGCCAGGCACGTTCACGCCTAAGAAGCATCATGGTATCACTCCTACGGCAAACACGCTTCCGCTCATAAGCCCAGAAACCCCTCGGCCGAAGAAATCCTACGGGCAGCTTTATTTGAACGGTCACGCGTATACATATCTTGGCCTGAAATGTTCGACCAGAGTATTTTACTGCACTCTGAATAGACCACAGCCGATGTATGTGACACAGCAACACGGCTTATCTATGTACTCGAATTGGAAGATATGCAAAGAAGTACCATCTGACGTTGATATGGCGCATTACGATTCGAGGCACAGACCGCTTAATTATACGACCGCCTGGAAAAAACAGGAGGACATTTTGACGCATTCCTCGGAAAGACCGACCACCCCAACTAGTTCCGATAGCGGTTTGGATAGCGATATGCAAGAAAAAGCGAAAAGAGTTAAGATATTCGACGGAGGATTTGAAAGCAACGAGGACTATACATATGTCAGGGGCAGAGGTCGAGGCCGATACGTTTGCGAGGAATGCGGCATTCGTTGTAAAAAGCCATCCATGTTAAAGAAACATATCAGAACGCACACGGACGTAAGGCCGTACACGTGTAAACATTGCGCTTTTAGCTTTAAAACCAAAGGCAACCTGACGAAACATATGAAATCGAAAGCTCATTACAAGAAGTGCGTCGAGCTCGGCGTTGTTCCGGTACCTACGACGGTCTGTgatgaaaatatcgataaagaAGCTATCGCCCGGTTGGCTGCAGGTGGAAATACCGAGGAATCCTcggaagaggaggaagaaagcGATGGAGAGGAGAGTGAAGAATCCGGAAGCGAGGAGCAAGAAGCTGCACAGAGTTTGCTAAGTCTATCGCAACGTAATACAAACAGATTTCCAGGGCTTCTACCGTCTGGAAGACCGACAACTTACCCTTACACTCTAACTTTCCCAACGACCTCCAGGTCCGCGGACGTATCATCTACCGCGATAAGCAACAACGTCTGCTTGAGCAGTCAAACTGTCACCACGCAAGAAACTACTCTCGTTCGAAACGAATTGTCCCATCGATACTATTTCCCCTCGAGCCGAACCGCTCCGGAAGAATCGAGGACGACCGTGATTCAATcatcgaaaaaagaaagttcCGACATCGAGGTGAACGGAGTCGATACCGACTCGCGAAATACTTTGGCACAGCCTATGGATCTCACGACGAAACCAGCCCTACAGCCGTTGCCCTCTTCCATACCGCAAAGAGCCAAGCCAGCAGATATTTTAACTCCCGTTTCGGAACCGGTACTGTTACAAACGATCGTTCAAACGATGGAAAGACTACCGATACAAGGAAGAGAGTGGAAACCGGACGCCGAGGGGCATATGTTGCAAGCATATCTCACTGAACGACACGTTATGGatagtaaaattaaacaaCAATACCGAGTAGGAAATACGAAGATGGAAAAGCAACCGAGAGAGAGGGACATTTACCCGGAACAATCATCTCCGAAATCAAGAAACGCTGAATTAGAGACTAGTCCAGTAACGACTTATAACGATCCTAGCAAGATACAAATGACTATGATAGATTCCAGGATTAAGCACGTATCGAAGCATACCACTGAAGATATCAAGATGGAAATCAGAGAGAAAATTTATCAGAACAATATCGTCATAGATCGACGGTCGTTCGATATCGAATCGATTcatagagaaaaagaaatagcagAGAGCATGAAACATACGGTTGCGCGGAAAATGGTTGTCGGGGGACCCGGTTTTAGATCGCCCTCGCCTAACGCTGCAACCACTAAACCACAAGCTGAGTTCTTGCAGCCCTCGAATGGACCTGCACCTAATTATGTCAGTTACAGTGTGACTGAAGATGGGAGAAGCGTCTGTGGAATTTGTAACAAGGTGTTCAGCAAACCTAGTCAGTTACGGTTGCATATCAACATTCATTACTTCGAGAGACCATTTAGATGCGAAAGTTGCGCGGTTTCTTTTCGAACCAAGGGTCATTTGACAAAGCACGAAAGATCTGTTTCTCACCACAATAAGGTTAGTATGACTTCCACGTTCGGAGCAGCGACCACCAGCAATCCAAGGCCATTTAAATGTACAGACTGCAAAATAGCATTCAGAATACATGGTCACTTGGCGAAGCATTTGCGTAGCAAAATGCACATTATGAAATTAGAATGTTTAGGAAAATTGCCCTTTGGAACGTACGCTGAGATGGAAAGATCTGGTGTCAATTTGAATGATATTGATACTACCGACTGTGATAATAGTCTTTCTAGTCTTCAGATGCTGGCTCAAAGACTTTGTGAAAAAGATCCTACAAAAATAGGTCAATGGGAGTCTGAAACAATTCCAAGTCAAGTGATCAGCGGTGGTGAAACTTCGTCCGATGAGGGTGAGCCTATTCTACAGCATGCGTGA
Protein Sequence: MTTETHTVAMTDPQLANNNNNNNTNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVTPQVEPKEDAVVSNGSPETTKRKESAKDSRESPKDPIKIEISAEPADGEPTESRKNGYVCPYCRLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDASKVSEDSDISLSDSASNGTGTPPPPPSSTPTTTSVSVKTIKTGKIYKPKFHTALQCVNNDIETSSLSSISSTNSSSSTAATTTPKPNPEQVQEHIDKIITDNQAIVDAVDPRLHKLIQRQQSLVETKQSTDQPLNLSSAEESSRKRCYSESFVQESKDYPNGPESSIIKDLLLKNQNSNQEGTTEYESYFCPSCNIPYSSIDNLDVHRKYYCKGSVSPRRDYQLEMEKRESDFDSKSSEYYSTLQPLPSPGPLLGNTRLVDAYAPPMKKQRSDPVPTTLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQTNSPTSEQIVSSKCVTSETASIVVRSGLHSGGTMVHKPPRTAASTPSSSISLPNTPKMLAPIIPNISTSNIAPNMSCYSYLEPNLNPLTSITAYNPLTLPQPGITNILHGGKVIPYVPGMPGPHTLTPAIDISTSLATDEAGYKVIPGLPGLHIVPQPLDLASPVKIQTPSTNTNATKIQTPIAGIPEPMSNGHVSMIGQPLDLASPAKDPKLGFKTPGNDVLKIGLTSPKVPSVTETSTRLRLKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEVPSDVDMAHYDSRHRPLNYTTAWKKQEDILTHSSERPTTPTSSDSGLDSDMQEKAKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIARLAAGGNTEESSEEEEESDGEESEESGSEEQEAAQSLLSLSQRNTNRFPGLLPSGRPTTYPYTLTFPTTSRSADVSSTAISNNVCLSSQTVTTQETTLVRNELSHRYYFPSSRTAPEESRTTVIQSSKKESSDIEVNGVDTDSRNTLAQPMDLTTKPALQPLPSSIPQRAKPADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKMEKQPRERDIYPEQSSPKSRNAELETSPVTTYNDPSKIQMTMIDSRIKHVSKHTTEDIKMEIREKIYQNNIVIDRRSFDIESIHREKEIAESMKHTVARKMVVGGPGFRSPSPNAATTKPQAEFLQPSNGPAPNYVSYSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLSSLQMLAQRLCEKDPTKIGQWESETIPSQVISGGETSSDEGEPILQHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00230874;
90% Identity: iTF_00230874;
80% Identity: -