Basic Information

Insect: Bombus dahlbomii
Gene Symbol: HIVEP1
Assembly: GCA_037178635.1
Location: CM074112.1:12292939-12309326[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00011 0.011 16.5 0.5 1 23 105 127 105 127 0.98

2 8 0.016 1.4 9.8 2.1 1 21 133 153 133 157 0.86

3 8 0.063 5.9 7.9 0.1 1 21 355 375 355 376 0.94

4 8 1.1e-06 0.00011 22.8 1.6 1 23 906 928 906 928 0.99

5 8 1.3e-05 0.0012 19.5 4.3 1 23 934 958 934 958 0.92

6 8 1.6e-06 0.00015 22.4 0.1 2 23 1367 1388 1366 1388 0.97

7 8 0.00061 0.057 14.2 1.8 1 23 1394 1418 1394 1418 0.92

8 8 0.0011 0.098 13.5 3.3 1 23 1439 1463 1439 1463 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00011	0.011	16.5	0.5	1	23	105	127	105	127	0.98
2	8	0.016	1.4	9.8	2.1	1	21	133	153	133	157	0.86
3	8	0.063	5.9	7.9	0.1	1	21	355	375	355	376	0.94
4	8	1.1e-06	0.00011	22.8	1.6	1	23	906	928	906	928	0.99
5	8	1.3e-05	0.0012	19.5	4.3	1	23	934	958	934	958	0.92
6	8	1.6e-06	0.00015	22.4	0.1	2	23	1367	1388	1366	1388	0.97
7	8	0.00061	0.057	14.2	1.8	1	23	1394	1418	1394	1418	0.92
8	8	0.0011	0.098	13.5	3.3	1	23	1439	1463	1439	1463	0.93

Sequence Information

Coding Sequence: ATGACAGACCCACAGTTAgcaaacaacaacaacaataacaacaccaacaacaacaacaacaacaacaacaacaacaacaacaacgatGGCGAGCCGAAATACTTGCACAAGAAGTTCAAGAAGATGGCGACGACCGAGGTTACGCCGCAAGTGGAGCCCAAGGAGGACGCCGTGGTCAGCAACGGTTCTCCAGAGACAACTAAAAGGAAGGAGTCGGCCAAGGACTCCAGAGAGTCGTCGAAAGACCCGATCAAGATCGAGATCTCTGCAGAACCCGCGGACGGAGAACCGACCGAATCGAGGAAAAACGGCTACGTGTGTCCTTATTGCAGGCTGTCGTGTGCGAAACCGAGCGTTCTGCAAAAACACATCCGAGCTCACACCAACGAGAGACCGTATCCTTGCGTTCCTTGCGGATTCGCGTTCAAGACCAAGTCAAATCTCTACAAGCACTGCAGATCCCGTGCTCACGCCCTTAAGATGGAGGGTGGTGATGCCAGCAAGGTATCGGAGGACTCGGACATAAGCTTGTCCGACAGTGCGAGCAACGGAACCGGCACACCACCACCCCCTCCGTCATCGACGCCCACGACGACTTCATTTAGTGTAAAAACGATTAAAACGGGGAAAATCTACAAGCCAAAATTTCACACGGCCCTCCAGTGTGTCAACAACGATATCGAAACGTCTTCCCTTTCCTCCATTTCTTCCACGAACAGTTCTTCCTCGACAGCCGCTACCACCACGCCAAAACCAAACCCGGAACAAGTACAGGaacatattgataaaattattacggACAACCAAGCGATCGTCGATGCGGTGGATCCGCGACTGCACAAACTGATTCAAAGACAGCAAAGTCTCGTGGAAACGAAACAGTCTACCGATCAGCCGTTGAATCTCTCATCCGCGGAGGAATCATCGAGAAAACGATGTTACAGTGAGAGCTTTGTGCAAGAAAACAAAGATTATCCGAATGGTCCGGAAAGTTCGATAATCAAGGATCTCctattgaaaaatcaaaactCGAGTCAAGAGGGAACAACGGAATACGAGAGCTATTTCTGCCCTTCCTGCAATATTCCTTACTCAAGTATCGATAATCTCGATGTTCATCGTAAGTACTACTGCAAAGGCAACGTGAGTCCTCGAAGAGATTATCAGTTGGAAATGGAGAAAAGAGAGTCGGATTTTGATTCCAAGTCTTCCGAATATTATAGCACCTTGCAACCCCTTCCCTCTCCCGGGCCTCTGTTGGGCAATACGAGGCTCGTCGACGCGTACGCTCCACCCATGAAGAAACAGAGATCGGACCCCGTACCAACCACGTTACGATCTCTCGAGGAGCTAAGCAAGTATCCACGACCAAACTCGTTGCAAATGTTCGGCGGGGAAGTCAGGATATTGGACAATACCGGTGAAACGAAGACGATGAGAATCGAGCCGCGACAAACCAACTCTCCTACGAGCGAGCAGATCGTGAGCAGCAAGTGTGTTACTTCGGAGACCGCTTCGATCGTGGTTAGATCGGGTCTTCACTCGGGAGGCACGATGGTACACAAACCGCCGCGTACGGCGGTCAGCACGCCTAGTTCCTCCATATCTTTGCCCAACACTCCGAAAATGTTGGCGCCGATCATACCGAACATATCAACCTCGAATATAGCACCCAACATGTCGTGCTACAGTTATCTAGAGCCGAACTTAAATCCTCTGACCAATATCACTGCCTATAACCCGCTGACTTTGCCTCAACCAGGGATCACGAATATCCTTCACGGTggtaaagttataccttatgttCCTGGCATGCCTGGACCACACACTCTGACGCCAGCCATAGACATATCCACGAGTTTAGCCACCGATGAAGCCGGATACAAGGTGATACCAGGATTGCCTGGCCTCCATATAGCTCCTCAACCCTTAGATCTCGCCAGTCCGGTAAAAATACAAACGCCAAGTACAAATACCAACGCCACCAAGATACAAACGCCAATAGCTGGAATTCCAGAGCCGATGTCCAATGGACACGTTTCGATGATAGGCCAGCCATTGGATCTCGCTAGCCCGGCAAAGGACCCCAAGCTCGGCTTCAAAACTCCTGGCAACGACGTCTTGAAGATCGGGTTAACAAGCCCAAAAGTTCCTAGCGTTAACGAGACCTCGACGAGACTTCGCCTCAAGTTCTTGAGGCCGACTTCGTTGCCACTAAAGCCAGGCACGTTCACGCCCAAGAAGCATCATGGTATCACTCCTACGGCAAACACGCTTCCGCTCATAAGCCCAGAAACCCCTCGGCCGAAGAAATCCTACGGGCAGCTTTATTTGAACGGTCACGCGTATACATATCTTGGTCTGAAATGTTCGACCAGAGTATTTTACTGTACACTGAATAGACCACAGCCGATGTATGTGACACAGCAACACGGCTTATCTATGTACTCGAATTGGAAGATATGCAAAGAAGTACCATCTGACGTTGATATGGCGCATTATGATTCGAGGCACAGACCGCTTAATTATACGACCGCCTGGAAAAAACAGGAGGACATTTTGACGCATTCCTCGGAAAGACCGACCACCCCAACTAGTTCCGATAGCGGTTTGGATAGCGATATGCAAGAAAAAGCGAAAAGGGTTAAGATATTCGACGGAGGATTTGAAAGCAACGAGGACTATACATATGTCAGGGGCAGAGGTCGAGGCCGATACGTTTGCGAGGAATGCGGCATTCGTTGTAAAAAGCCATCCATGTTAAAGAAACATATCAGAACGCACACGGACGTAAGGCCGTACACGTGTAAACATTGCGCTTTTAGCTTTAAAACCAAAGGCAACCTGACGAAACATATGAAGTCGAAAGCTCATTACAAGAAGTGCGTCGAGCTCGGCGTTGTTCCGGTGCCTACGACAGTCTGTgacgaaaatatcgataaagaaGCTATCGCCCGGTTGGCTGCAGGTGGAAATACCGAGGAATCCTCGGAAGAAGAGGACGAAAGCGATGGAGAGGAGAGTGAAGAATCCGGAAGCGAGGAGCAAGAAGCTGCACAGAGTTTGCTAAGTCTGTCGCAACGTAATACAAACAGATTTCCAGGGCTTCTACCGTCTGGAAGACCGACAACTTACCCGTACACTCTAACTTTTCCAACGACCTCCAGGTCGGCGAACGTATCATCTACCGCGATAAGCAGCAACGTCTGCTTGAGCAGCCAAACTGTCACCACGCAAGAAACTACTCTCGTTCGAAACGAACTGTCCCATCGATACTATTTCCCCTCGAGCCGAACCGCTCCGGAAGAATCGAGGACGACCGTGATTCAATcatcgaaaaaagaaagttccGACATCGAGGTGAACGGAGTCGATACCGACTCGCGAAATACTTTGGCACAGCCCATGGATCTCACTACGAAACCAGCCCTACAACCGTTGCCCTCTTCCATACCGCAAAGAGCCAAGCCAGCAGATATTTTAACTCCCGTTTCGGAACCGGTACTGTTACAAACGATCGTTCAAACGATGGAAAGACTACCGATACAAGGAAGAGAGTGGAAACCGGATGCCGAGGGGCATATGTTGCAAGCATATCTCACTGAACGACACGTTATGGatagtaaaattaaacaacaatACCGAGTAGGAAATACGAAGATGGAAAAGCAACCGAGAGAGAGGGACATTTACCCGGAACAATCATCTCCGAAATCAAGAAACGCTGAATTAGAGATTAGTCCAGTAACGACTTACAACGATCCTAGCAAGATACAAATGACTATGATAGATTCCAGGATTAAGCACGTATCGAAGCATACCACTGAAGATATCAAAATGGAAATCAGAGAGAAAATTTATCAGAACAATATCGTCATAGATCGACGGTCGTTCGATATCGAATCGATtcacagagaaaaagaaatagcagAGAGCATGAAACATACGGTTGCGCGGAAAATGGTTGTCGGGGGACCCGGTTTTAGATCGCCCTCGCCTAACGCTGCAATCCCTAAACCACAAGCTGAGTTCTTGCAGCCCTCGAATGGACCTGCACCTAATTATGTCAGTTACAGTGTGACTGAAGATGGGAGAAGCGTCTGTGGAATTTGTAACAAGGTGTTCAGCAAACCTAGTCAGTTACGGTTGCATATCAACATTCATTACTTCGAGAGACCATTTAGATGCGAAAGTTGCGCGGTTTCTTTTCGAACCAAGGGTCATTTGACAAAGCACGAAAGATCTGTTTCTCATCACAATAAGGTTAGTATGACTTCCACGTTCGGAGCAGCGACCACCAGCAATCCAAGGCCATTTAAATGTACAGACTGCAAAATAGCATTCAGAATACATGGCCACTTGGCGAAGCATTTGCGTAGCAAAATGCACATTATGAAATTAGAATGTTTAGGAAAATTGCCCTTCGGAACGTACGCTGAGATGGAAAGATCTGGTGTCAATTTGAATGATATTGATACTACCGACTGTGATAATAGTCTTTCTAGTCTTCAGATGCTGGCTCAAAGACTTTGTGAAAAAGATCCTACAAAAATAGGTCAATGGGAGCCTGAAACAATTCCAAGTCAAGTGATCAGCGGTGGCGAGACTTCGTCCGACGAGGGTGAGCCTATTCTACAGCATGCGTGA
Protein Sequence: MTDPQLANNNNNNNTNNNNNNNNNNNNNDGEPKYLHKKFKKMATTEVTPQVEPKEDAVVSNGSPETTKRKESAKDSRESSKDPIKIEISAEPADGEPTESRKNGYVCPYCRLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDASKVSEDSDISLSDSASNGTGTPPPPPSSTPTTTSFSVKTIKTGKIYKPKFHTALQCVNNDIETSSLSSISSTNSSSSTAATTTPKPNPEQVQEHIDKIITDNQAIVDAVDPRLHKLIQRQQSLVETKQSTDQPLNLSSAEESSRKRCYSESFVQENKDYPNGPESSIIKDLLLKNQNSSQEGTTEYESYFCPSCNIPYSSIDNLDVHRKYYCKGNVSPRRDYQLEMEKRESDFDSKSSEYYSTLQPLPSPGPLLGNTRLVDAYAPPMKKQRSDPVPTTLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQTNSPTSEQIVSSKCVTSETASIVVRSGLHSGGTMVHKPPRTAVSTPSSSISLPNTPKMLAPIIPNISTSNIAPNMSCYSYLEPNLNPLTNITAYNPLTLPQPGITNILHGGKVIPYVPGMPGPHTLTPAIDISTSLATDEAGYKVIPGLPGLHIAPQPLDLASPVKIQTPSTNTNATKIQTPIAGIPEPMSNGHVSMIGQPLDLASPAKDPKLGFKTPGNDVLKIGLTSPKVPSVNETSTRLRLKFLRPTSLPLKPGTFTPKKHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVTQQHGLSMYSNWKICKEVPSDVDMAHYDSRHRPLNYTTAWKKQEDILTHSSERPTTPTSSDSGLDSDMQEKAKRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCAFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTTVCDENIDKEAIARLAAGGNTEESSEEEDESDGEESEESGSEEQEAAQSLLSLSQRNTNRFPGLLPSGRPTTYPYTLTFPTTSRSANVSSTAISSNVCLSSQTVTTQETTLVRNELSHRYYFPSSRTAPEESRTTVIQSSKKESSDIEVNGVDTDSRNTLAQPMDLTTKPALQPLPSSIPQRAKPADILTPVSEPVLLQTIVQTMERLPIQGREWKPDAEGHMLQAYLTERHVMDSKIKQQYRVGNTKMEKQPRERDIYPEQSSPKSRNAELEISPVTTYNDPSKIQMTMIDSRIKHVSKHTTEDIKMEIREKIYQNNIVIDRRSFDIESIHREKEIAESMKHTVARKMVVGGPGFRSPSPNAAIPKPQAEFLQPSNGPAPNYVSYSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLSSLQMLAQRLCEKDPTKIGQWEPETIPSQVISGGETSSDEGEPILQHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00230874;
90% Identity: iTF_00230874;
80% Identity: -