Bsko017187.1
Basic Information
- Insect
- Bombus skorikovi
- Gene Symbol
- TFIP11
- Assembly
- GCA_014737355.1
- Location
- JACXIH010000100.1:1728840-1731948[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-104 7.8e-100 334.1 15.5 1 275 392 660 392 660 0.98 2 2 0.0014 14 5.3 0.1 244 272 674 702 665 705 0.88
Sequence Information
- Coding Sequence
- ATGTCAGAAGACGAAGTAGAAAGCTTTGAAATCACGGATTACGACCTTGAGAATGAATTTAATATTAATCGTCCTAGGCGTAAATTATCAAAAAAACAACAAATGCTTGGTATTTGGGGCGATGATAGCGACGAAGATGAATTATCTGCCAGACCATCGTTTAAGACATTTGATAAAGGACCGAAGAATTATACGACTCCTGTAAATTTTGTAGCAGGAGGTATTCAACAAGCTGGGAAGCCTAAAGAGGAGACAGAGGACAAAGATGACAATGAAAGCGACAACGAGAGCAAATCACAAAAAGAATTTCCAAATAGTTCGAGTTCAGAAGATGAGAAGCCAAGTTCTGTACATCAACGTACGTCGTTTTCGTTAAATACGGATGGGGATATTGCAGGTTTACGTAAAAAGAGGCACAAAGTAAACCCCTTATTAATGCAAAGTGGGATGGGGAGTTGGGAAGTCTATACAAAAGGTATTGGTGCCAAGTTGTTGCTACAGATGGGTTTTGAACCTGGAAAAGGATTAGGTAAACAGTTACAAGGTATAAGCGCACCGGTTGAAGCACATCTGAGGAAAGGTAGAGGTGCTATTGGTGCTTATGGACCAGAAAAAGGTCCTAAAGTTGCAGAAAAGAAGAAAGATGAAGAAATAGAAGATGGGAAAGATCCCAAAGCTAAGTTATCACAGTGGAGGAAAGGAGATGGAAATACTGCTAAGAAGAAAGTAAATTATATATATCGAAGTGTTGATCAAGTTTTGGAAGATGGGAAATTGAAACCTAACAAAAAGGTAAGAATATCCAACGAGATGAGTAGGGTTAAAGTTATAGATATGACTGGACCGGAACAAAGAATTCTTAGTGGATATCATGCTATAGCTGGGGGTCAACAGCGACCCGACGAAAACGTCGTAGTTACCGATAAAAAGTCCAAAGTTAATTTTGCATTGCCAGAACTTCAGCATAATTTAAATATACTTGTGGATATGTGTGAGCAAGATATTATACAAAACGATAGAAGGACACGGCATCTAAGCGATAGAGTAATTGCGCTAGAGGCAGAGAAAAGAAACTTGTCTAAAGTTATAGATCAACACGGTCAATTAATAGATACGTTAGAAAACGTTCTTGCAATCGTAGACAGATTGATGGATGAAACAAATCAATTAACGTTACAAGAAACTGCGGACGCTTTTAAAGATTTACAAGATAAATATTACGAGGAGTATAAAATGTACGAACTCGGTGAATTAGCTAGCAGTTTTGTTGGTCCAAAAATAAAAGATTGTTTAATTAGTTGGAATCCATTGATGCAACCAAAACAATGTATTAAATTATTCGATCAATGGAAAAGTATCTTAGAAAGTGGTACCACCACCACTCTTCAAACAAGAACTATGCACCCGTATGATCATCTCGTTTGGAATTCGTGGATGCCATCAATCAGAGGTGCTATACAACAGTGGACATGTAGGCAGCCAGAACCACTAATTGAATTAATAGAACATTGGATCCCACTACTTCCAAATTGGATATTAGAAAATATTTTAGATATGCTGGTTCTTCCTAAACTTACCTTGGAAGTAGAAGAATGGAATCCCCTTACTGATACAGTGCCTATTCACACATGGATTCATCCTTGGTTACCACTTTTACGAAATCGTTTAGATACTTTAATATATCCAATAATACGACGTAAATTAGGATCCGCATTAGGTGGTTGGCACCCGTCCGACAGGTCTGCCAGATTAATGTTACAACCATGGTCTAATGTTTTCGCAAAAGGAGATATGGAAGCCTTTTTAGTGAAAAATATCATCCCAAAATTGCAAATAGCACTTTCAGAATTTGTTATAAATCCCCATCAGCAACATTTAGATCAATGGAACTGGGTATATGAATGGAAGGACTTACTTCCATCTCATATAATGGCAGGCCTGTTGGATAAATTCTTTTTCCCTAAATGGTTACAAGTTTTGGCTTTGTGGCTAAATCATTCTCCTAACTATGATCAAGTTACAAACTGGTATATGGGATGGAAGAGTATGTTGAGTGAAAAAATATTGGCCGAACCGTTGGTAAAAGAACATTTCAAAAAAGCGTTAGAAATAATGAATAGAGCAGTTTCCGTGCCACAGAGTCATCAACCAGGTGCAATGGAACAAGTTTCCTATTTAACGAGCTTAGAAAGAAGTCAACCTACTATGTCACAAATGCCTTCAACAGCTCAACCAAGAATGGAGAGACTTGCCGAAGCAGTTAGGACAGCATCGCAAATACCTCACGGTTTCAAAGACCTTGTTCAAAAGAAGTGCGAGGAAAAAGGTATATTGTTTATGCCAATACCGAATCGGTACAGGGAAGCAAAACAAGTTTATAAAGTTGGTAATGTCCAAGCTTATATAGATGGAAATGTTTTATTCGTTTGTCACAATGGCATGAATTGGATGCCAACGCATCTAAATGCTTTACTAGACATGTCTGAACTTTAG
- Protein Sequence
- MSEDEVESFEITDYDLENEFNINRPRRKLSKKQQMLGIWGDDSDEDELSARPSFKTFDKGPKNYTTPVNFVAGGIQQAGKPKEETEDKDDNESDNESKSQKEFPNSSSSEDEKPSSVHQRTSFSLNTDGDIAGLRKKRHKVNPLLMQSGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKGPKVAEKKKDEEIEDGKDPKAKLSQWRKGDGNTAKKKVNYIYRSVDQVLEDGKLKPNKKVRISNEMSRVKVIDMTGPEQRILSGYHAIAGGQQRPDENVVVTDKKSKVNFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVIALEAEKRNLSKVIDQHGQLIDTLENVLAIVDRLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSFVGPKIKDCLISWNPLMQPKQCIKLFDQWKSILESGTTTTLQTRTMHPYDHLVWNSWMPSIRGAIQQWTCRQPEPLIELIEHWIPLLPNWILENILDMLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSNVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKDLLPSHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKSMLSEKILAEPLVKEHFKKALEIMNRAVSVPQSHQPGAMEQVSYLTSLERSQPTMSQMPSTAQPRMERLAEAVRTASQIPHGFKDLVQKKCEEKGILFMPIPNRYREAKQVYKVGNVQAYIDGNVLFVCHNGMNWMPTHLNALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00223870;
- 90% Identity
- iTF_00118005;
- 80% Identity
- -