Bsib008018.1
Basic Information
- Insect
- Bombus sibiricus
- Gene Symbol
- pnr
- Assembly
- GCA_014737505.1
- Location
- JACXIM010000050.1:1676792-1696469[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-18 1.4e-14 53.7 3.2 1 34 184 216 184 218 0.97 2 2 6.5e-19 2.2e-15 56.3 6.2 1 35 238 271 238 272 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGCAGCGGTTACGGCGCGAGTTCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCCCGTCTACGTACCATCCTCGAGGCCGACGATCCCGTCGGCGGCGACAGCCGCGGCAGCCGCTGCGGCGGCGGCTCAGTATCACTCGTTCCCCGGTTCTGGCTCGCCAGCTTGGGAGAAGACCGCGGCCTCGTGGCAGCATGGCGTGGAGACGTACGCCGCGCACCACGCGCTCGCTGGCCATGCGAGCGGATCCGCGGCCGCGGCTGCGGCTGCCGCCGCCGCCATGGGTCCGCATTCTGGCCACGCGCACCCTCATCCGCATCCGCACGCGGCCCATCCGCACACCGGACACCCTCATTCGAGCCTCGCCGCGGCCGCCCCCTTTTACGCCCAAAACGTCGCCATGATGTCCTCCTGGCGAGCCTACGATGGAGCTGGATTTCAACGGGCCTCTCCTTACGACACCGCGATGGATTTTCAATTCGGCGAAGGTCGCGAGTGCGTTAACTGCGGAGCTATATCGACGCCTCTTTGGAGGAGGGACGGCACCGGACATTATCTGTGCAACGCGTGCGGACTCTATCACAAGATGAACGGAATGAACAGACCTCTGATAAAGCCGTCCAAACGGCTGACAGCAACCAGGCGTTTGGGTTTGTGCTGCACGAATTGCGGTACCCGCACCACCACTCTCTGGAGGCGCAACAACGAAGGCGAACCTGTTTGCAACGCTTGCGGTCTCTACTTTAAGCTGCACGGCGTCAACAGACCTCTCGCGATGCGGAAAGACGGTATTCAGACGCGAAAACGAAAACCGAAGAAGACGCCCGAGTCGAACGCCAGATCGTCCACGGTGGATCACGAAACTACCGCCGTCTCGGCCGCTTCTTCTCCGTCCACGGGTAAGCACGGAATCCACTCCGCTGGCGATCCTTTCCGCCATTCGTTCGTTTTCCACACGGCGATCTTTCTGTCATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTCGGACAGGCCGGTCTATCTCGGGCATACGTCTCTATTGGCGACCGGAAGCGTGGCTACCGTGAAAACCGAACCGCGAAGTTGCGACGGCATTGTCGGTCAGCCGTACGCCTCGTATTACCAGCATCCTCATCAACTGGGGGTGGCGACCAGCGAGCATCAACAGCAAACGTACTACGGGAGCCAGGAAGCGCCCTATCATCATCAACATCACGTTACCGCGGCTGCCAAGTTGTTAGCCTCCACGTAA
- Protein Sequence
- MFHGGGSSGYGASSXXXXXXXXXXXXXXXXXXXXXAPVYVPSSRPTIPSAATAAAAAAAAAQYHSFPGSGSPAWEKTAASWQHGVETYAAHHALAGHASGSAAAAAAAAAAMGPHSGHAHPHPHPHAAHPHTGHPHSSLAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPESNARSSTVDHETTAVSAASSPSTGKHGIHSAGDPFRHSFVFHTAIFLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDRPVYLGHTSLLATGSVATVKTEPRSCDGIVGQPYASYYQHPHQLGVATSEHQQQTYYGSQEAPYHHQHHVTAAAKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00224915; iTF_00220154; iTF_00226272; iTF_00220932; iTF_00229704; iTF_00216750; iTF_00218094; iTF_00233584; iTF_00228337; iTF_00221618; iTF_00219476; iTF_00225588; iTF_00226953; iTF_00231675;
- 90% Identity
- iTF_00224915;
- 80% Identity
- -