Bhor009022.1
Basic Information
- Insect
- Bombus hortorum
- Gene Symbol
- pnr
- Assembly
- GCA_905332935.1
- Location
- HG995190.1:17392172-17394433[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-18 1.3e-14 53.7 3.2 1 34 184 216 184 218 0.97 2 2 5.5e-19 2e-15 56.3 6.2 1 35 238 271 238 272 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGCAGCGGTTACGGCGCGAGTTCCGACTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCCCGTCTACGTACCATCTTCCAGGCCGACGATCCCGTCGGCGGCGACAGCCGCGGCAGCCGCTGCGGCGGCCGCTCAGTATCACTCGTTCCCCGGTTCTGGCTCGCCGGCTTGGGAGAAGACCGCGGCCTCGTGGCAGCATGGCGTGGAGACGTACGCGGCTCACCACGCGCTCGCTGGCCACGCGAGCGGATCCGCGGCCGCGGCTGCGGCTGCCGCCGCCGCCATGGGCCCGCATTCCGGCCACGCGCACCCTCATCCGCATCCGCACGCGGCCCATCCGCACACCGGACACCCTCACTCGAGCCTCGCCGCGGCCGCCCCCTTTTACGCCCAAAACGTCGCCATGATGTCCTCCTGGCGAGCCTACGATGGAGCTGGATTTCAACGGGCCTCTCCTTACGACACCGCGATGGATTTTCAATTCGGCGAGGGTCGCGAGTGCGTTAATTGCGGAGCTATATCGACGCCGCTTTGGAGGAGGGACGGCACCGGGCATTATCTGTGCAACGCGTGCGGACTCTATCACAAGATGAACGGAATGAACAGACCGTTGATAAAACCGTCCAAACGTCTGACAGCCACCAGGCGATTGGGTTTGTGCTGCACGAATTGCGGTACCCGCACCACCACTCTCTGGAGGCGCAACAACGAAGGCGAACCTGTTTGCAACGCTTGCGGTCTCTACTTTAAACTGCACGGCGTCAACAGACCACTCGCGATGCGAAAAGACGGTATTCAGACGCGAAAACGAAAACCCAAGAAGACGCCCGAATCGAACGCCAGATCGTCCACGGTGGATCACGAAACTACCGCCGTCTCGGCCGCTTCTTCCCCGTCCACGGGTAAGCACGGAATCCACACTCTCCTCGCCATCCTTTCCGCCATTCGTTCGATTTTCCACGCGGCGATCTTTCTGTCGTCCACAGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGCGTCCAGTTCGTCGGACAGGCCGGTTTATCTCGGGCATACGTCCCTATTGACGACCGGAAGCGTAGCTACCGTGAAAACCGAACCGCGAAGTTGCGACGGCATTGTCGGTCAGCCGTACACCTCGTATTACCAGCATCCTCATCAACTGGGGGTGGCGACCAGCGAGCATCAACAACAAACGTACTACGGGAGCCAGGAAGCTCCCTATCACCATCAACATCACGTTACCGCGGCTGCCAAATTGTTAGCCTCCACGTAA
- Protein Sequence
- MFHGGGSSGYGASSDYXXXXXXXXXXXXXXXXXXXAPVYVPSSRPTIPSAATAAAAAAAAAQYHSFPGSGSPAWEKTAASWQHGVETYAAHHALAGHASGSAAAAAAAAAAMGPHSGHAHPHPHPHAAHPHTGHPHSSLAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPESNARSSTVDHETTAVSAASSPSTGKHGIHTLLAILSAIRSIFHAAIFLSSTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASSSSDRPVYLGHTSLLTTGSVATVKTEPRSCDGIVGQPYTSYYQHPHQLGVATSEHQQQTYYGSQEAPYHHQHHVTAAAKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227630;
- 90% Identity
- iTF_00224915;
- 80% Identity
- -