Btur013471.1
Basic Information
- Insect
- Bombus turneri
- Gene Symbol
- pnr
- Assembly
- GCA_014825825.1
- Location
- CM026116.1:6388135-6390383[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-18 9.8e-15 53.9 3.2 1 34 184 216 184 218 0.97 2 2 4.7e-19 1.5e-15 56.6 6.2 1 35 238 271 238 272 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGGGGCGGAAGCAGCGGTTACGGCGCGAGTTCCGACTACCAACAGCAATCTCAACAACAACAACAACAGCAGCAACAACACGGCCAGCAGCTTCAGGCGCCCGTCTACGTACCATCTTCTAGGCCGACGATCCCGTCGGCGGCGACAGCCGCGGCAGCCGCTGCGGCGGCGGCTCAGTACCACTCGTTCCCCGGTTCTGGCTCGCCAGCTTGGGAGAAGACCGCGGCCTCGTGGCAGCATGGCGTGGAGACGTACGCCGCGCACCACGCGCTCGCTGGCCACGCGAGCGGATCCGCGGCCGCGGCTGCGGCTGCCGCCGCCGCCATGGGTCCGCATTCTGGCCACGCGCATCCTCATCCGCATCCGCACGCGGCTCATCCGCACACCGGACACCCTCACTCGAGCCTCGCCGCGGCCGCCCCCTTTTACGCTCAAAACGTCGCCATGATGTCCTCCTGGCGAGCCTACGATGGAGCTGGATTTCAACGGGCCTCTCCCTACGACACCGCGATGGATTTTCAATTCGGCGAGGGTCGCGAGTGCGTTAATTGCGGAGCTATATCGACGCCGCTTTGGAGGAGGGACGGCACCGGGCATTATCTGTGCAACGCGTGCGGACTCTATCACAAGATGAACGGAATGAACAGACCGTTGATAAAGCCGTCCAAACGTCTGACAGCCACCAGGCGATTGGGTTTGTGCTGCACGAATTGCGGTACCCGCACCACCACTCTCTGGAGGCGCAACAACGAAGGCGAACCTGTTTGCAACGCTTGCGGTCTCTACTTTAAGCTGCACGGCGTCAACAGACCTCTCGCGATGCGAAAAGACGGTATTCAGACGCGAAAACGAAAACCGAAGAAAACACCCGAGTCGAACGCCAGATCGTCCACGGTGGATCACGAAACTACCGCCGTCTCGGCCGCTTCTTCTCCGTCCACGGGTAAGCACGGAATCCACTGTCCTTGCGATCCTTTCCGCCATTCTTCGTCGGACAGGCCGGTCTACCTCGGACATACGTCACTATTGGCGACCGGAAGCGTAGCTACCGTGAAAACCGAACCGCGAAGTTGCGACGGCATTGTCGGTCAGCCGTACTCCTCGTACTACCAGCATCCTCATCAACTGGGGGTGGCGACCAGCGAGCATCAACAGCAAACGTACTACGGGAGCCAGGAAGCGCCCTATCATCATCAACATCACGTTACCGCGGCTGCCAAATTATTAGCCTCCACGTAA
- Protein Sequence
- MFHGGGSSGYGASSDYQQQSQQQQQQQQQHGQQLQAPVYVPSSRPTIPSAATAAAAAAAAAQYHSFPGSGSPAWEKTAASWQHGVETYAAHHALAGHASGSAAAAAAAAAAMGPHSGHAHPHPHPHAAHPHTGHPHSSLAAAAPFYAQNVAMMSSWRAYDGAGFQRASPYDTAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKTPESNARSSTVDHETTAVSAASSPSTGKHGIHCPCDPFRHSSSDRPVYLGHTSLLATGSVATVKTEPRSCDGIVGQPYSSYYQHPHQLGVATSEHQQQTYYGSQEAPYHHQHHVTAAAKLLAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00227630;
- 90% Identity
- iTF_00219476;
- 80% Identity
- -