Bpol011631.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus polaris
Gene Symbol
Hr39
Assembly
GCA_014737335.1
Location
JACXIO010000153.1:4286308-4295652[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.5 1.1e+04 -4.3 4.1 118 155 36 73 19 100 0.49
2 4 0.58 4.2e+03 -2.9 6.0 53 163 289 398 275 419 0.58
3 4 3 2.2e+04 -10.2 16.0 59 151 407 514 379 539 0.49
4 4 1.8e-73 1.3e-69 235.9 1.8 1 408 606 983 606 983 0.79

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCTGGACCGGGCCCAGGGCCGGGTCCTGGTTGGTGGCCAGCCTCACAGTCCTGGAAGACGAACTCCTGCACCGCTGCCTCCTCGTCCACTTGTTCAACCGTTCCAGACAACTCCGCCTCCGTCTCTGCCTCTTGCACCACCTCTGCGTCCTCCCTGGCGACCACCACATCGGCCACCTCATCGACCAGCTGCTGTTCCTCCACCCCTGGCGGTGGACCGTCCTGCACGATCACCGCGGCCCGCTCCTCCGAAACGGGAAAGAACGTCTCTGTCACGACGATCAATGTACCCCCTAATCAGGACATGCACGATGGCAAGGGTATATGCAAGTATCTTGGCGGCCAGAATGGCGTGACAGTATCGGTAGTGTCAAGCTGTGGCTCAATACTGGGATGTGGAAGCGCGAATGTTGTGTCTACCACGGGGATAGGCAGTAGCACCGGCACACAGAGTATTGGCATCGGAGTGAACATCCTTGACCAGAGCACGGCGGATGATGACGCGGAGGATAGCGACGTTGAGATAAGCAAAATCGACTTCCGAGGGGTGAATTTGCGTACGAAGAAGAAGCGAGACGTGTCTGGTAGTCAGAGTCAAAGCGGGGAGAAAATCGGCGATGGAGAGGTGGAGGATGGAAACGGTTGTTACGATGGAAGCGATGCGTCTCAGCAACAACCGGAGAGGCCCATGTCATGGGAGGGAGAACTATCCGATCAAGAAATGTCTTCCAATACGATTACAAATCAAGATACACACGAGGACACGTCAATGGAGGGTGTTCAAGTATGTGGCGCGAGTCCCGGGCCAGTGGAACAAAAATTTCCCATAAAACCAGAGCCAGATTTTCAGTCCAACCCAGGTTTCACATTTGCCTCTTTTCACGACACCGGATTACCTCTGAATCACGGCCAGCAAATACAACAACAGCAACAACAGCGCAACATTGAGAATCTTGAACAGACACAACAAAACGATTTGCCTCTTCTCGTAGGAAAATTACTTGGTGGTTACAATAGTTCGACTCCGAATCACAGCCCAGTGTTGAATCCTAGACACCATTTAACAAAGCATAGCCACACGAGATCGCAGGTGCCGTCACCGGACTCGGCCATTCATTCCGCATACAGCGTATTCAGCTCCCCGACGCAAAGTCCTCACGCAACTCGCCACTCCCCCCTGGGCGCGGCAAGTCCAGTTCCATCTTCGTCGCTATCCTTGTCGCGACACAGTTTCAACAATTCCACTTCCTCGTTGTCGCTCTCGTTGTCACACTCCCTCTCGAGAAACAATTCGGACGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTCAGCCCACCCACACACTCGCCCGTCCAGCAACCGAGACATCCGCAGCATCACCAGCATCAAGTTGCTCAAGGAAGCCCACTTCATCTGCCAGCAACCGCTTCTCCCGCCATTACTCATCACTACACTTCCTCTGCACCGGGTTCTGAACTATCTCCAGAAGGACACGCTGCTACAGACGATCAGGAAGACTGTAGAATACCCTCGGCACCGTCTGGTATATCCACAAGGCAGCAACTAATTAATACCCCGTGTCCAATTTGCGGGGATAAGATCAGTGGTTTTCATTATGGAATATTCTCGTGCGAGTCGTGCAAGGGATTTTTCAAACGCACCGTCCAGAATCGAAAGAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCAGTCACCGTTGTTACCAGGAAAAAATGCCCCGCCTGCAGATTCGAGAAGTGCCTCAGTATGGGTATGAAGCTCGAGGCGATTAGGGAGGATCGCACCAGGGGTGGCAGAAGTACCTATCAGTGTACGTATACTTTTCCACCAAATTTTGTCGGTAGTCCTGCAAGTAACATGTCCAGCGACAAATTAGCTACCGGAGGAAATTGTAGTCCAGCTCCAGCTGGTAACGAACATCACTATCCGGCAAGGCACCATTCGAATCACTCCCATAAGATGCAAGTGGTACCGCAACTTCTACAGGATATCATGGACGTAGAGCACTTGTGGCATTACAATGATAACGATCGTATGACCGGGATTCAAAACGCAGGAACGAATCTTACTAGAAACAACGATTCAATGTTATTGAGTGTTAGAAGCAACGGAGGATCTGGAATAGAGAACGACACAGGTTCAGGTATTGAGTGTTCCTCCAGTAGAACTGCAGGAAATGGTAATCCTAGTAATAGAAGAGATAACAGATCATGCTCCAATGTTTCTAATGTTGGTAACGAACAACACGCTGCATCCGTTGGTAACAGTTCTCAAATCAACAGTACGAATTGTAATCCAACTCAACATCCTGATTTTCTGTCGAACCTCTGCAATATCGCTGATCATCGACTCTACAAAATAGTGAAGTGGTGCAAGAGTTTGCCGTTATTTAAAAACATTTCGATCGATGATCAGATCTGTCTGTTGATTAATTCTTGGTGCGAGCTACTGCTTTTCTCATGCTGCTTTCGCAGTATGAGCACTCCCGGTGAAATAAGAGTGTCTCTCGGTAAGTCGATTACACTGGAACAAGCTAGGCAGCTTGGCTTAGCGACCTGCATCGAGAGGATGCTTGCATTTACTAACAATTTGAGAAGGCTCCGAGTAGATCAGTACGAATACGTGGCGATGAAGGTAATAGTACTGTTGACCTCTGATACGAGTGAACTGAAAGAACCTGAAAAAGTTAGAGCATCTCAGGAAAAGGCTTTACAAGCATTGCAACAATATACTATCGCAAGGTACCCAGAAATGCCCGCTAAGTTTGGCGAATTATTATTGAGAATTCCAGATTTACAAAGAACATGCCAAGCAGGAAAGGAATTATTAAGTGCTAAACGTGCTGAAGGAGAAGGCAGCTCGTTTAATCTGTTGATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGPGPGWWPASQSWKTNSCTAASSSTCSTVPDNSASVSASCTTSASSLATTTSATSSTSCCSSTPGGGPSCTITAARSSETGKNVSVTTINVPPNQDMHDGKGICKYLGGQNGVTVSVVSSCGSILGCGSANVVSTTGIGSSTGTQSIGIGVNILDQSTADDDAEDSDVEISKIDFRGVNLRTKKKRDVSGSQSQSGEKIGDGEVEDGNGCYDGSDASQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGASPGPVEQKFPIKPEPDFQSNPGFTFASFHDTGLPLNHGQQIQQQQQQRNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHATRHSPLGAASPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPATASPAITHHYTSSAPGSELSPEGHAATDDQEDCRIPSAPSGISTRQQLINTPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVVTRKKCPACRFEKCLSMGMKLEAIREDRTRGGRSTYQCTYTFPPNFVGSPASNMSSDKLATGGNCSPAPAGNEHHYPARHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMTGIQNAGTNLTRNNDSMLLSVRSNGGSGIENDTGSGIECSSSRTAGNGNPSNRRDNRSCSNVSNVGNEQHAASVGNSSQINSTNCNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733987;
90% Identity
iTF_00228733;
80% Identity
iTF_00225975;