Bmus008215.1
Basic Information
- Insect
- Bombus muscorum
- Gene Symbol
- tfip11
- Assembly
- GCA_963971185.1
- Location
- OZ020131.1:2025908-2029037[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-102 2e-98 330.0 14.2 1 275 391 659 391 659 0.98 2 2 0.004 36 4.4 0.2 244 272 673 701 665 704 0.88
Sequence Information
- Coding Sequence
- ATGTCAGAAGACGAAGTAGAAAGCTTCGAAATCACGGATTACGATCTTGAGAATGAATTCAATATTAATCGTCCTAGGCgtaaattatcaaaaaaaCAACAAATGCTTGgTGTTTGGGGCGATGATAGCGACGAAGATGAATTATCCGCTAGACCATCGTTTAAGACATTTGATAAAGGACCAAAGAATTATACGACTCCTGTAAATTTTGTAGCAGGAGGTATTCAACAAGCTGGGAAGCCTAAAGACGAGACAGAGGACAAAGATGACGATGAAAGCGACAACGGGAGCAAATCACAAAAAGAATTTCCAAATAGTTCGAGTTCTGAAGATGAGAAACCGAGTTCTGTGCACCAACGTACGTCGTTTTCGTTAAATACGGATGGGGATATTGCAGGTTTACGTAAAAAGAAGCATAAAGTAAACCCCTTATTAATGCAAAGTGGGATGGGAAGTTGGGAAGTCTATACAAAAGGTATTGGTGCCAAGTTGTTGCTACAGATGGGCTTTGAACCTGGAAAAGGATTGGGTAAACAGTTACAAGGTATAAGCGCGCCAGTTGAAGCACATCTAAGGAAAGGTAGAGGTGCGATTGGTGCTTATGGACCAGAAAAAGGTCCTAAAGTtgcagaaaagaaaaaagacgaagaaataGGAGAAGGGAAAGATCCCAAAGCTAAATTATCACAGTGGAGGAAAGGAGATGGAAATACTGTTAAGAGaaaagtaaattatatatatcgaaGTGTTGATCAAGTTTTGGAAGATGGGAAATTGAAACCTAACAAAAAGGCAAGAATATCCAAGATGAGTAGGGTTAAAGTTATAGATATGACTGGCCCGGAACAAAGAATTCTCAGTGGATATCATGCTATAGCTAGAGGTCAAAAGCGACCCGACGAAAACGTCGTAGTTACCGATAAAAAGTCCAAAGTTAATTTTGCATTGCCAGAACTTcagcataatttaaatatacttgtGGATATGTGTGAGCAAGATATTATACAAAACGATAGAAGGACACGGCATCTAAGTGATAGAGTAATTGCACTAAAGGCAGAGAAGAGAAACTTGTCTAAAGTTATAGATCAACACGGTCAGGTAATAGATACGTTAGAAAACGTTCTTGCAATTGTAGACAGATTGATGGATGAAACAAATCAATTAACGTTACAAGAAACAGCGGACGCTTTTAAAGATTTACAAGATAAATATTACGAGGAATATAAAATGTACGAACTCGGTGAATTAGCTGGCAGTTTTGTTGGTCCAAAAATAAAGGATTGTTTAATTAGTTGGAATCCATTGATGCAACCAAAAcaatgtattaaattattcgatcAATGGAAAAGTATCTTAGAGAGTGGTACCACCAGCACTCTTCAACCAAGACCTATGCACCCGTATGATCATCTTGTTTGGAATTCGTGGATGCCATCGATCAGAGGTGCTATACAacAGTGGACATGTAGGCAGCCAGAACCACTAATTGAATTAATAGAACATTGGATCCCACTACTTCCAAATTggatattagaaaatattttagatatgcTGGTTCTCCCCAAACTCACTTTGGAAGTAGAAGAATGGAATCCCCTTACCGATACAGTGCCTATTCACACATGGATTCATCCTTGGTTACCACTTTTACgaAATCGTTTAGATACTTTAATATATCCAATAATACGACGTAAATTAGGATCCGCATTGGGTGGTTGGCACCCGTCTGACAGATCTGCCAGATTAATGTTACAACCATGGTCTAATGTTTTCGCAAAAGGAGATATGGAAGCCTTCCTAGTGAAAAATATCATCCCAAAATTGCAAATAGCTCTTTCGGAATTTGTTATAAATCCCCATCAACAACATTTAGATCAATGGAACTGGGTATACGAATGGAAGGACTTACTTCCATCTCATATAATGGCAGGCCTGTTggataaattctttttcccTAAATGGTTACAAGTTTTGGCCTTGTGGCTAAATCATTCTCCTAACTTTGATCAAGTTACAAATTGGTATATGGGATGGAAAAGTATGctgaatgaaaaaatattggcCGAACCGTTGGTGAAAGAGCATTTCAAAAAAGCGTTAGAAATAATGAATAGAGCAGTTTCCGTGCCACAGAGTCATCAACCGGGTGCAATGGAACAAGTTTCCTACTTAACGAGCTTAGAAAGAAGTCAACCTACTATGTCACAAATGCCTTCAACAGCTCAACCAAGAATGGagAGACTTGCCGAAGCAGTTAGGACAGTATCACAAATACCTCATGGTTTCAAAGACCTTGTACAAAAGAAGTGCGAGGAAAAAGGTATATTGTTTATGCCAATACCGAATCGGTACAGGGAAGCAAAGCAAGTTTATAAAGTTGGTAATGTCCAAGCTTATATAGATGGAAATGTTTTATTCGTTTGTCACAATGGCATGAATTGGATGCCAACACATCTAAATGCTTTACTAGACATGTCTGAACTTTAA
- Protein Sequence
- MSEDEVESFEITDYDLENEFNINRPRRKLSKKQQMLGVWGDDSDEDELSARPSFKTFDKGPKNYTTPVNFVAGGIQQAGKPKDETEDKDDDESDNGSKSQKEFPNSSSSEDEKPSSVHQRTSFSLNTDGDIAGLRKKKHKVNPLLMQSGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKGPKVAEKKKDEEIGEGKDPKAKLSQWRKGDGNTVKRKVNYIYRSVDQVLEDGKLKPNKKARISKMSRVKVIDMTGPEQRILSGYHAIARGQKRPDENVVVTDKKSKVNFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVIALKAEKRNLSKVIDQHGQVIDTLENVLAIVDRLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELAGSFVGPKIKDCLISWNPLMQPKQCIKLFDQWKSILESGTTSTLQPRPMHPYDHLVWNSWMPSIRGAIQQWTCRQPEPLIELIEHWIPLLPNWILENILDMLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSNVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKDLLPSHIMAGLLDKFFFPKWLQVLALWLNHSPNFDQVTNWYMGWKSMLNEKILAEPLVKEHFKKALEIMNRAVSVPQSHQPGAMEQVSYLTSLERSQPTMSQMPSTAQPRMERLAEAVRTVSQIPHGFKDLVQKKCEEKGILFMPIPNRYREAKQVYKVGNVQAYIDGNVLFVCHNGMNWMPTHLNALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_00118005;
- 80% Identity
- -