Bign018757.1
Basic Information
- Insect
- Bombus ignitus
- Gene Symbol
- SUB1
- Assembly
- GCA_014825875.1
- Location
- CM026146.1:1873440-1874050[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.27 5.9e+03 -2.8 0.1 29 36 15 22 8 23 0.60 2 2 5.5e-26 1.2e-21 76.2 0.2 1 51 51 102 51 103 0.96
Sequence Information
- Coding Sequence
- ATGCCGAAGTCAAAAGAGTTTGTATACACGGATGACAGTTCTGATGAGGAAATAAAACCGAAGAAGCAAAAGAAAGAAATTGAGGACAAAAAAGGAAAAGTATCAAAAAAGATCCCAGAGAGAGAATCTAATAAAGATGAAGATACTGTATGGGATTTGGGAAATAATCGCCAAATTAGTATAAGAGACTTTAAAGGAAAATTATATGTTGACATCAGAGAAATGTATTACGATAAAGAAGCAAATTTAAAGCCTGGGAAGAAAGGTATTTGCTTAAGCATATCTCAATGGCAAAAATTACTATCTGTTGTGGATGATGTCGACAAAGCAGTAAAGTCTAAATCCTGA
- Protein Sequence
- MPKSKEFVYTDDSSDEEIKPKKQKKEIEDKKGKVSKKIPERESNKDEDTVWDLGNNRQISIRDFKGKLYVDIREMYYDKEANLKPGKKGICLSISQWQKLLSVVDDVDKAVKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00218433;
- 90% Identity
- iTF_00218433;
- 80% Identity
- -