Bdah011616.1
Basic Information
- Insect
- Bombus dahlbomii
- Gene Symbol
- Sub1_1
- Assembly
- GCA_037178635.1
- Location
- CM074109.1:14933018-14933631[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-26 1.3e-21 76.1 0.2 1 51 52 103 52 104 0.96
Sequence Information
- Coding Sequence
- ATGCCGAAGTCAAAAGAGTTTGTATACTCGGATAATGACAGTAGTGATGAGgaaataaaaccAAAGaggcaaaagaaagaaattgatgacaaaaaaggaaaggtaTCGAAAAAGGTGCCGCAGAGAGAATCTAATAAAGATGAAGATACCGTATGGGATTTGGGAAATAATCGCCAAATTAGTATAAGAGACtttaaaggaaaattatatGTTGACATCAGAGAAATGTATTACGATAAAGAAGCAAATTTAAAGCCTGGAAAGAAAGGTATTTGCTTAAGCATAGCTCAATGGCAAAAGTTACTATCTGTTGTGGATGACGTCGACAAAGCAGTAAAGTCTAAATCCTga
- Protein Sequence
- MPKSKEFVYSDNDSSDEEIKPKRQKKEIDDKKGKVSKKVPQRESNKDEDTVWDLGNNRQISIRDFKGKLYVDIREMYYDKEANLKPGKKGICLSIAQWQKLLSVVDDVDKAVKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00214401; iTF_00215717; iTF_00225925; iTF_00232613; iTF_00222535; iTF_00227977; iTF_00228681; iTF_00230699; iTF_00223884; iTF_00220589; iTF_00226605; iTF_00219121; iTF_00224562; iTF_00229363; iTF_00216404; iTF_00227284; iTF_00221269; iTF_00230038; iTF_00233238; iTF_00215031; iTF_00231991; iTF_00217082; iTF_00217757; iTF_00225245; iTF_00221919; iTF_00231327; iTF_00223200;
- 90% Identity
- iTF_00215717; iTF_00225925; iTF_00222535; iTF_00227977; iTF_00228681; iTF_00220589; iTF_00226605; iTF_00219121; iTF_00229363; iTF_00216404; iTF_00227284; iTF_00217082; iTF_00225245; iTF_00231327; iTF_00214401; iTF_00232613; iTF_00231991; iTF_00221919; iTF_00230699; iTF_00233238; iTF_00223884; iTF_00224562; iTF_00221269; iTF_00230038; iTF_00217757; iTF_00223200; iTF_00215031;
- 80% Identity
- -