Basic Information

Insect: Bombus haemorrhoidalis
Gene Symbol: PAXBP1
Assembly: GCA_014825975.1
Location: CM026162.1:1730827-1736834[-]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.3e-28 3.1e-24 86.1 1.6 3 272 546 754 544 756 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.3e-28	3.1e-24	86.1	1.6	3	272	546	754	544	756	0.92

Sequence Information

Coding Sequence: ATGTTAAGGACAATGTCATTATTTAATAAACCGAAGAGAAACATCCGCCGTCGACCTTTCAACGACGATGATGAAGATAATGAAAATAGGATGGAAGTGGAAGACACCCAGCCTGTAAAATCGAAAACAAAGAAGAAGGATAAACCAAAGCAGACGCTCCTCAGTTTTGGAGAGGAGCTGGAAGAAGCGGATGATGGAGAAGTCTTTAAAGTGAAGAAATCATCTAGGAGCAAAAAATTGATGAAACAGCTAGATCACGAAAGGAGAAAAAAGAAAGGTGAAGAGAAAATGCAAATGGACTCTGAGCAACCACACATGTCCGTTAAAGTGGAAAAAGAATTAGAAATAAAGACAGATGATCTAGTAGTAAAAATAAAAAACGCAGGACCTTTAATTCTGAATGGGCGAGCTGCATTGGCAGCTGGAAAGGATGATTACACATCTGATGAAGAGGAAGATGAACCACGTAGTCATAAATTTAGAAGAAATACAGATAAAGCTGACACAATGAAAATTCTTCTTGAAAGTGGTTGCATACCAGATGCTGCAATGATCCATGCAGCTAGGAAATGCAGACAAAAGGCAAGAGAGTTAGGAACTGATTATATTCCTATAGAAGAACAAAGCGATGATAAAGGTAAATCAAGACTTATTAGGGAAGAAGATCATGATAGAAGTGATGATGATGATTCACAAGACCGAATTGACATGACCGTTAACACTGAAGCGCGTGATAAAGAGAAAAGGAGAGAAGCCTTCCTTGCTTCACAAGTACCATTAAAACTTTCTGATGATGAAAGTGAACACGAAAATGAAGAAGAAGAGTGGGAAGCTCAACAAATTAGGAAAGGAGTGACTGGTGCACAGATTGCAGCAGCGCAACAAGACTCCATGATGCAACAACAATATTCAATGGGTATGAACGTAAATTCAATGATGGGAAGTGGAATATCTCTGGAAATGGTAATGATGCCAGCTCCACCACCTCCTCCAGTGATTCAACCCCCAGATCCTACAAAAATAGTACCAATCACTCCTCAAGAGGTTGTGAATAAAATGCGTGCAAGATTGGATAGTTTAAAAGAAGTGCATCGACGTCATCAATTAGATCAGGATCGTTTAGAGCAAGAGTTAGGACAAACTGTGAAAGAACTGGATGATGCTGAAATTCGTGCACCGCAGCTTGCGCAGCGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGTTGCCGCTGGTCATTGGATTGGAGCAGCGCTGGTTAAACCTTTATAATGAACGTGCAATAGAACTAATGGAAAGAAGACGACAAGATACAAGGGATCAAGCAGAAGAGATTACAACAGCTGCAAGAGGACAACCTATACGTAGAGGGCCAGAAGTTGAAGCTCGTATCCGTCGAGCTACAGAGAGAGAAGGAAGAAGAGCTCGACGAAGAAGAGCTAGAGAATTAGCTCCTACATTACCAAAACATATTGATGGAATGTCTAGTGATGATGAAGTTACTGAGCAGCAAAATCTCGCGTTTAAACAAACAAAAGATGAAATTGATAGTGACAGTAAAGAAATATTTTCTGACGTCATGGACGAATATTGCACAATAAGAGGAATACTTTCAAAATTAGAGTCTTGGAGAGAAACTGATAGAGATGCTTATATGGAAGCTTATGTATCTTTATGTATACCTAAAATTATTTCTCCAATTATTAGATTACTATTATTGACATGGAATCCTATTATGGAAAGTGCAGATATAGAGAGAACAAAATGGTATAACACTTTACTTTTGTATGCATTAAATAATAAAGAAACAGAAGAGTCACTTAAAAGAGATCCAGATGTCAGATTAGTACCATTTACAATAGAAAAAATTGTTATACCTAAATTAACATCTATAGTTGAGAGAATATGGGATCCAATGTCTACATCACAAACATTACGACTTGTAGGCACAGTAAATCGTCTTATTAGGGAATATCCAAATTTAAATGATACAAGCAAACCATTAGAAACATTATTTAATGCCATATTGGAGAAAATTAAATCAGCAGTTGAAAATGATGTTTTTATACCAATTTTTCCAAAACAAGTCTTAGATACTAAACATCAATTTTTTCAAAGGCAGTTTGCAATGGCTGTGAAACTTTTAAGAAATTTATTGAGCTGGCAAGGTCTTCTTGGAGACACACAATTAAAAAATTTAGCTCTTGGTTCATTATTAAATAGATATCTTTTAGCGGGTTTAAGAGTATCTGTTCCGACTGATGCATTATTTAAAGCAAATATGGTAATGAGTACACTCCCTCGTGCGTGGTTGCAGGGTGAAACAATAGAACATCTCAAAATGTTTGCTACACTTATCCAACAACTCAGTGAACAATTAGATCAAGCAAATCCAGCGCATAACGAAGCCTGGGAATATTCGAAGTCCATCTTAAAAATAATCAAACCTTTGTAA
Protein Sequence: MLRTMSLFNKPKRNIRRRPFNDDDEDNENRMEVEDTQPVKSKTKKKDKPKQTLLSFGEELEEADDGEVFKVKKSSRSKKLMKQLDHERRKKKGEEKMQMDSEQPHMSVKVEKELEIKTDDLVVKIKNAGPLILNGRAALAAGKDDYTSDEEEDEPRSHKFRRNTDKADTMKILLESGCIPDAAMIHAARKCRQKARELGTDYIPIEEQSDDKGKSRLIREEDHDRSDDDDSQDRIDMTVNTEARDKEKRREAFLASQVPLKLSDDESEHENEEEEWEAQQIRKGVTGAQIAAAQQDSMMQQQYSMGMNVNSMMGSGISLEMVMMPAPPPPPVIQPPDPTKIVPITPQEVVNKMRARLDSLKEVHRRHQLDQDRLEQELGQTVKELDDAEIRAPQLAQRFRYYQELRGYVTDLVECLDEKLPLVIGLEQRWLNLYNERAIELMERRRQDTRDQAEEITTAARGQPIRRGPEVEARIRRATEREGRRARRRRARELAPTLPKHIDGMSSDDEVTEQQNLAFKQTKDEIDSDSKEIFSDVMDEYCTIRGILSKLESWRETDRDAYMEAYVSLCIPKIISPIIRLLLLTWNPIMESADIERTKWYNTLLLYALNNKETEESLKRDPDVRLVPFTIEKIVIPKLTSIVERIWDPMSTSQTLRLVGTVNRLIREYPNLNDTSKPLETLFNAILEKIKSAVENDVFIPIFPKQVLDTKHQFFQRQFAMAVKLLRNLLSWQGLLGDTQLKNLALGSLLNRYLLAGLRVSVPTDALFKANMVMSTLPRAWLQGETIEHLKMFATLIQQLSEQLDQANPAHNEAWEYSKSILKIIKPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01123058;
90% Identity: iTF_00861872;
80% Identity: iTF_00219109;