Basic Information

Insect: Bombus confusus
Gene Symbol: -
Assembly: GCA_014737475.1
Location: JACXIV010000040.1:3835314-3840828[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 3.1 6e+03 -2.8 0.1 14 22 9 17 5 18 0.77

2 16 1.8 3.4e+03 -2.0 5.7 6 43 233 265 231 266 0.76

3 16 4 7.7e+03 -3.2 0.5 15 24 384 393 381 408 0.67

4 16 0.13 2.5e+02 1.6 0.5 18 33 466 478 461 484 0.80

5 16 7.3 1.4e+04 -4.0 0.0 14 26 593 605 590 608 0.73

6 16 4 7.8e+03 -3.2 0.1 15 28 622 635 616 638 0.76

7 16 5.6e-06 0.011 15.6 1.8 14 44 685 712 680 712 0.92

8 16 0.083 1.6e+02 2.2 5.2 11 29 712 730 709 742 0.78

9 16 3.2 6.3e+03 -2.9 0.1 19 25 782 788 781 793 0.87

10 16 0.0082 16 5.4 0.0 12 43 852 880 843 881 0.83

11 16 0.012 24 4.9 0.3 8 29 924 943 918 954 0.81

12 16 2.6 5.1e+03 -2.6 0.1 19 28 978 987 974 994 0.79

13 16 0.73 1.4e+03 -0.8 0.2 14 28 1047 1061 1041 1082 0.76

14 16 1.5e-06 0.0028 17.4 0.1 11 44 1096 1126 1093 1126 0.89

15 16 5.7 1.1e+04 -3.7 0.9 18 39 1162 1180 1152 1185 0.55

16 16 1.3 2.6e+03 -1.7 0.2 17 26 1213 1222 1212 1229 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	3.1	6e+03	-2.8	0.1	14	22	9	17	5	18	0.77
2	16	1.8	3.4e+03	-2.0	5.7	6	43	233	265	231	266	0.76
3	16	4	7.7e+03	-3.2	0.5	15	24	384	393	381	408	0.67
4	16	0.13	2.5e+02	1.6	0.5	18	33	466	478	461	484	0.80
5	16	7.3	1.4e+04	-4.0	0.0	14	26	593	605	590	608	0.73
6	16	4	7.8e+03	-3.2	0.1	15	28	622	635	616	638	0.76
7	16	5.6e-06	0.011	15.6	1.8	14	44	685	712	680	712	0.92
8	16	0.083	1.6e+02	2.2	5.2	11	29	712	730	709	742	0.78
9	16	3.2	6.3e+03	-2.9	0.1	19	25	782	788	781	793	0.87
10	16	0.0082	16	5.4	0.0	12	43	852	880	843	881	0.83
11	16	0.012	24	4.9	0.3	8	29	924	943	918	954	0.81
12	16	2.6	5.1e+03	-2.6	0.1	19	28	978	987	974	994	0.79
13	16	0.73	1.4e+03	-0.8	0.2	14	28	1047	1061	1041	1082	0.76
14	16	1.5e-06	0.0028	17.4	0.1	11	44	1096	1126	1093	1126	0.89
15	16	5.7	1.1e+04	-3.7	0.9	18	39	1162	1180	1152	1185	0.55
16	16	1.3	2.6e+03	-1.7	0.2	17	26	1213	1222	1212	1229	0.84

Sequence Information

Coding Sequence: ATGGACGAGGTGGCAGAGTTGCAGAATTTGGAAAATGTGTGTAGGCTCTGCCTGTCCACCGATGAGCCAAAATTGTCGGTGTTCGAAACGGGAGACTCTTTAGTGTCCATGGTCAGCAAGATACAAGCTTGTCTATCGATTCAGATTTTAATAACGGATAAATTACCAACAAAAATATGTGCGCAATGTATTAAAAATATAAATGAGTGGCATAATTACAAGGAAAAATGTTTGTATTCACAAGATAAGTTGAATCAGTGGTTGGAACAACACCTGCAACCAAATCCGATGGTTGTAACTATCAAGGATGAACCTGTTGATTTGGACTTGTGTGAGGACAATGTCGAGGTTATTTTGGAATCTACTAATGATTCGGACTTGGAAGCCGCTAATCTTGAGGAAAATATAAATACTTTAGAAAATAATGATCAAGGTCAGCAATTACTTGATGATGAAATGGCTTTAGACAGAGATCAACCAGCTTTAACGAAAGACATGGTTATTTGTATAAAATCTGAACCACAAGATGATTGTGACACAGATTGTACTATAGAAATTGAATCTGTTACTGGTAATGAACTTGTTTTGAATCCCCTTTCAAGCTCAGAGGATAGGATTATGGAAGCTGATTCTACTCAGAAATCCAATGCATCCATATTAGCAAGCAAGAAAAAACCCAGAAGAGGCCCACACACCCATTTTAGGGGTGCACGTGTTTTTAAACAGAAGTGTGTATATTGTCAAATTAATTTGCATTCTAAGCATTCTTATGCGAAACACATGGAAAGATTTCATAGTGACAAACAGAATGGTAGTGTTAATCAATTGGAATTGGAAGATGATGAAGAGCTTATTGAAGATTTGGAAGATGAATTAATGAGCATGGAGAAGGATGCTCCATTGACACAAGTGCAGCAAAATATTATAAGTCAATTGAAGACATATTCGTGTTACTCTTGTGAACAAAGCTTTAGTGATCGTAGAAGTACTCTTTTCCATATTCGTCAGCACATGCCTGATCTAAGACCACACACGTGTATTGCGTGTTTAACAGAGTTTCCTGATCGATCAATGTATAAACTACATTGTAGAGCATCGTTCGAGTGTGCAATGAAGATCGCTCTCGTTATACCAAAACAAGGCGAGGAGAAATGCTTCACTTGTAATATGTGTTTACGTCCTATGCAGGACAGAAAGCAGCTGCTTACTCATCTATCAAAACATTCAGATAAACAGTATGAGGAACTGGTATCTCCAACACGATCTCCTCCTAAATTAAAGCCAGTAACTCCTCTGCCATCTTTGAGACAGGAGTCTTCGAAAAAATTGTTCAAAGGAAATTGTACTGCGGACATACCCAGCCCTTACAATAATGGCGATCCTGCACACAATCATAAATGCGATCTGTGTGGTATGATTTACAAATACAAGCCAAACATGCTGAAACATAGAGACCTGTGTCAACGTTTATCATCTGACGCCAGAATATCCTACAGGTGTGTTGATTGTGGCATGACATATTTGGTGTTCAAAAAGTTTCATACTCATATAATGGTGGACCACAACAAGAATGATTTCATATGTTCTGAATGCGGCAGCAAATTCAAATCTCCTAGTGATTATTTGGAGCATCACAAAGAGCACTTTAATAACGTTAATAAACAAGGAACTTCTGTACCGAAAAGCGATACAATAAGGGTTACGCACAACATTTCAAAGTCTATCAAGGATTGGGATACGTTTGAAGCTGAAGTGAATGCTGGTAAACTATCAGACAGTAATCAGTATAGCTGTGCTCTCTGTAATTTGGAATTTACTACTAGAGCTGAACTAATGGAACACAGGAATCTTCATCTGAAAGTGAAGATTTATTCTTGTGTCATCTGTCGTAGTATGTTTAGCAGTGCAGGTGCTTTGGAAATCCACATGAAAGATCATGGTATAGAAGATCCGAATGAAAGAAATGCAAATATCTCCTGCATGGAGTATGGTACAGTAGAAGATTCACAGGACTCAAATTCATTAAATGTCAGCGCCACCTCGGATCCTGGTGATAAGAAGAACGAGTGCTATGTGTGTGCCAAGGTATTCTCGAATACTGCTAATCTTAAAAGGCATATGAGAAATATTCACAATGCTAAGAAAAACCACATCAACTGCTCCTACTGTCGGCGAACGTTCAAGAGTAAAGAAATGCATGAGCGACATGTTGCAACTGATCACCAAAAAATTACGAAGGGCATATATCAGTGTTCTGAATGTCCAAAGAGTTTCTTCTTTCAAGCTAACCTAAATCTTCACTTCCAAACTACCCATCAGATGCAATCAGTAGGTGGTCACGGATGCGATATTTGCGGTAAGATGTTCATAGAAGAATCATCTCTAAAGATACACAGGAGCTGGCACAATCGAGCAAACTCTAGATTCAGTTTAAGATTTATGAAGAAAGAGCTCCCAAAGCCATTGATTCAGACCAAACAAGAGGAATCTTCCAATTCCAGTATGACCCGACAGGCTAGAGCACGAAAATCTTATCCAAATTTACCTCCAGAAAAGCCGAATGGTAATTTACAGTGCCAAGTTTGCAGTGACAAGTTCAACGATGTAACAGAATTGAGGACACACTTATGGGATGTGCACTGTGCTCGCAATAAAACTGAGAAGAGCTTTTCAGGCGACGAATTTCAATGTGAGGTTTGTACAAATGTTTTCCCTGACAAGGAGACATTAGACATGCATATGCAATGGCACAAAGCTAAACCCATTTTTGATATTATAAAGAAATCTAATTACCCTTGTGACATTTGTGGGAAACGGTATAGCTCCGAAAAAATACTGGCGAGACATAAGAAGCTTCACAAATCCACAGCCGTAGCTGCTGCAAAACTACAGTCATCAGCTGGCAAACACGCAGCAAGTAATCCACTTTTATGCACCATCTGTTACAAGATGTTCAGTAGTGTTCGGTCGCTTCAGCGTCACAAGGTCAACATACATGCTAGCATATTCGATGAACAACCACAGCAAGTATACAACAATGCGAGAAAACTGTCTCTAGAAGAGCCAAGATCTAAGAAAATAAAATTAGAAGAAGAGGATAAGAAAGCACCTATTGCCATGGATGCCATGAGCGCGGGAAAGAAGTCGGTTATGTGCCACGTCTGTAGGAAATTCTTTGCGAACATGAGTGTGTTGTACAAGCACAAACAATTGGTGCACAATAAGAATCACACAAATCTGATACAGAATCTAGCCAAGTTATATAATATGGAATGTGTACCATTACCCAGCAATGATGGTAAAGTCCTTTGCAACATTTGCTACAAAAAGTTTACTGGTGTGTCGAATCTGCGCCAGCATTTTACTATAAAACATAAAAATGTTCTGCCCAAGTATGCTTGTTCTATAGACGGCTGCAAGCTTACGTTCCCAACGCCGATGATTTTAAAGAACCACGAATTGTCACACACCAGCATTATCTACAGTTGCACCATATGCGACAGACACGTGTTCAGCAAGGCAGCAATGTCAGATCATATGTTGACGACACACAACACTGTCTACAACGCTGAGAACAGCAAGAACTTCCACAGAGAGATGGATTTGACCAAATATGTGGTGGAAGGTGCAGTAGACGCGACTTGTCCTCACTGCAAGATCAAATATCCCAACAATAGGGCCATGAAGATTCACTACTTCAAGTTCCACGAGGGTACAAACCAGTAG
Protein Sequence: MDEVAELQNLENVCRLCLSTDEPKLSVFETGDSLVSMVSKIQACLSIQILITDKLPTKICAQCIKNINEWHNYKEKCLYSQDKLNQWLEQHLQPNPMVVTIKDEPVDLDLCEDNVEVILESTNDSDLEAANLEENINTLENNDQGQQLLDDEMALDRDQPALTKDMVICIKSEPQDDCDTDCTIEIESVTGNELVLNPLSSSEDRIMEADSTQKSNASILASKKKPRRGPHTHFRGARVFKQKCVYCQINLHSKHSYAKHMERFHSDKQNGSVNQLELEDDEELIEDLEDELMSMEKDAPLTQVQQNIISQLKTYSCYSCEQSFSDRRSTLFHIRQHMPDLRPHTCIACLTEFPDRSMYKLHCRASFECAMKIALVIPKQGEEKCFTCNMCLRPMQDRKQLLTHLSKHSDKQYEELVSPTRSPPKLKPVTPLPSLRQESSKKLFKGNCTADIPSPYNNGDPAHNHKCDLCGMIYKYKPNMLKHRDLCQRLSSDARISYRCVDCGMTYLVFKKFHTHIMVDHNKNDFICSECGSKFKSPSDYLEHHKEHFNNVNKQGTSVPKSDTIRVTHNISKSIKDWDTFEAEVNAGKLSDSNQYSCALCNLEFTTRAELMEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPNERNANISCMEYGTVEDSQDSNSLNVSATSDPGDKKNECYVCAKVFSNTANLKRHMRNIHNAKKNHINCSYCRRTFKSKEMHERHVATDHQKITKGIYQCSECPKSFFFQANLNLHFQTTHQMQSVGGHGCDICGKMFIEESSLKIHRSWHNRANSRFSLRFMKKELPKPLIQTKQEESSNSSMTRQARARKSYPNLPPEKPNGNLQCQVCSDKFNDVTELRTHLWDVHCARNKTEKSFSGDEFQCEVCTNVFPDKETLDMHMQWHKAKPIFDIIKKSNYPCDICGKRYSSEKILARHKKLHKSTAVAAAKLQSSAGKHAASNPLLCTICYKMFSSVRSLQRHKVNIHASIFDEQPQQVYNNARKLSLEEPRSKKIKLEEEDKKAPIAMDAMSAGKKSVMCHVCRKFFANMSVLYKHKQLVHNKNHTNLIQNLAKLYNMECVPLPSNDGKVLCNICYKKFTGVSNLRQHFTIKHKNVLPKYACSIDGCKLTFPTPMILKNHELSHTSIIYSCTICDRHVFSKAAMSDHMLTTHNTVYNAENSKNFHREMDLTKYVVEGAVDATCPHCKIKYPNNRAMKIHYFKFHEGTNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00226094;
90% Identity: iTF_00216565;
80% Identity: iTF_00216565;