Bcon008314.1
Basic Information
- Insect
- Bombus confusus
- Gene Symbol
- tfip11
- Assembly
- GCA_014737475.1
- Location
- JACXIV010000052.1:1879981-1883341[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-104 2.8e-100 335.3 16.0 1 275 393 661 393 661 0.98 2 2 0.0052 41 3.4 0.1 244 272 675 703 666 706 0.87
Sequence Information
- Coding Sequence
- ATGTCGGAAGACGAAGTAGAAAGCTTTGAAATCACGGATTACGACCTTGAAAATGAATTCAATATTAATCGTCCTAGGCGTAAATTATCAAAAAAACAACAAATGCTTGGTATTTGGGCAGATGATAGCGAAGATGAATTGTCTGCTAGACCATCGTTTAAAACATTTGATAAAGGACCAAAGAATTATACTACTCCTGTAAATTTCGTAGCAGGAGGTATTCAACAAGCTGGAAAGCCTAAAGAAGAGGCAGAAGACAAAGATGACAATGAAAGCGACAATGAGAGTACAAGTAAATCACAAAAAGAATTTCCAAATAGTTCGAGTTCTGAAGATGAGAAGCCGAGTTCTATGCATCAACGTACGTCGTTTTCGTTAAATACAGATGGGGATATTGCAGGTTTACGTAAAAAGAAGCATAAAGTAAATCCCTTATTGATGCAAAGTGGAATGGGGAGTTGGGAAGTGTATACAAAAGGTATTGGTGCCAAGTTGTTGCTACAGATGGGTTTTGAACCTGGGAAAGGTTTGGGTAAACAGTTACAAGGGATAAGCGCGCCAGTTGAAGCACATCTGAGGAAAGGCAGAGGTGCAATTGGTGCTTATGGACCAGAGAAAGGTCCTAAAGTTGCAGAAAAGAAAAAAGACGAAGAAATAGAAGAAGGAAAGGACCCCAAAGCTAAGTTATCACAGTGGAGAAAAGGAGATGGAAATACTGCTAAGAAAAAAGTAAATTATATATATCGAAGTGTTGATCAAGTTTTAGAAGATGGGAAATTGAAACCTAACAAAAAAGTAAGAATATCCAACGAGATGAGTAGGGTTAAAGTTATAGATATGACTGGACCGGAACAAAGAATTCTCAGTGGATATCATGCTATAGCTGGAGGTCAACAGCGACCCGACGAAAACGTCGTAGTTACCGATAAAAAGTCCAAAGTTAATTTTTCATTACCAGAACTTCAGCATAATTTAAATATACTTGTGGATATGTGTGAGCAAGATATTATACAAAACGATAGAAGGAAACGGCATCTAAGCGATAGAGTAGTTGCGCTAGAAGCAGAGAAGAGAAATTTGTCTAAAGTTATAGATCAACACAGTCAATTAATAGATACGTTAGAAAACGTTCTTGCAATCGTAGATAGATTGATGGATGAAACAAATCAATTAACGTTACAAGAAACTGCGGAAGCTTTCAAAGATTTACAAGATAAGTATTACGAGGAGTATAAAATGTACGAACTCGGTGAATTAGCTAGCAGTTTCGTTGGTCCAAAAATAAAAGATTGCTTAATTAGTTGGAATCCATTGATGCAACCAAAACAATGTATCAAATTATTCGATCAATGGAAAAGTATCTTAGAGAGTGGTACCACCACCACTCTTCAAACAAGAACTATGCACCCGTATGATCATCTTGTTTGGAATTCATGGATGCCATCAATCAGAGGTGCTATACAACAGTGGACATGTAGGCAGCCAGAACCAATAATTGAATTAATAGAATATTGGATGCCATTGCTTCCAAATTGGATATTAGAAAATATTTTAGATATGCTAGTTCTTCCAAAACTTACCTTGGAAGTAGAAGAATGGAATCCCCTTACTGATACAGTGCCTATTCACACATGGATTCATCCTTGGTTACCACTTTTACAAAATCGTTTAGATACTTTGATATATCCAATAATACGACGTAAATTAGGATCCGCGTTGGGTGGCTGGCACCCGTCCGACAGGTCTGCCAGATTAATGTTACAACCATGGTCTAATGTTTTTGCAAAAGGAGATATGGAAGCCTTCCTAGTGAAAAATATTATCCCAAAATTGCAAATAGCACTTTCGGAATTTGTTATAAATCCCCATCAGCAACATTTAGATCAATGGAATTGGGTATACGAATGGAAGGACTTACTTCCATCTCATATAATGGCAGGCCTATTGGATAAATTCTTTTTCCCTAAATGGTTACAAGTTTTGGCCTTATGGCTAAATCATTCTCCTAACTATGATCAAGTTACAAATTGGTATATAGGATGGAAAAGTATGTTGAGTGAAAAAATATTGGCCGAACCGTTGGTGAAAGAACATTTCAAAAAAGCATTAGAAATAATGAATAGAGCAGTTTCCGTGCCACAGAGTCATCAACCGGGTGCGATGGAACAAGTTTCCTATTTAACAAGCTTAGAAAGGAATCAACCTACTATGTCACAAATGCCTTCAACAGCTCAACCAAGAATGGAGAGACTTGCCGAAGCAGTTAGGACAGCATCACAAATACCTCATGGTTTCAAAGACCTTGTTCAAAAGAAGTGTGAGGAAAAAGGTATATTGTTTATGCCAATACCGAATCGGTATAGGGAAGCAAAACAAGTTTATAAAGTTGGTAATGTCCAAGCTTATATAGATGGAAATGTTTTATTTGTTTGTCACAATGGAATAAATTGGATGCCAACACACCTAAATGCTTTGCTAGATATGTCCGAACTTTAG
- Protein Sequence
- MSEDEVESFEITDYDLENEFNINRPRRKLSKKQQMLGIWADDSEDELSARPSFKTFDKGPKNYTTPVNFVAGGIQQAGKPKEEAEDKDDNESDNESTSKSQKEFPNSSSSEDEKPSSMHQRTSFSLNTDGDIAGLRKKKHKVNPLLMQSGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKGPKVAEKKKDEEIEEGKDPKAKLSQWRKGDGNTAKKKVNYIYRSVDQVLEDGKLKPNKKVRISNEMSRVKVIDMTGPEQRILSGYHAIAGGQQRPDENVVVTDKKSKVNFSLPELQHNLNILVDMCEQDIIQNDRRKRHLSDRVVALEAEKRNLSKVIDQHSQLIDTLENVLAIVDRLMDETNQLTLQETAEAFKDLQDKYYEEYKMYELGELASSFVGPKIKDCLISWNPLMQPKQCIKLFDQWKSILESGTTTTLQTRTMHPYDHLVWNSWMPSIRGAIQQWTCRQPEPIIELIEYWMPLLPNWILENILDMLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLQNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSNVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKDLLPSHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYIGWKSMLSEKILAEPLVKEHFKKALEIMNRAVSVPQSHQPGAMEQVSYLTSLERNQPTMSQMPSTAQPRMERLAEAVRTASQIPHGFKDLVQKKCEEKGILFMPIPNRYREAKQVYKVGNVQAYIDGNVLFVCHNGINWMPTHLNALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_00118005;
- 80% Identity
- -