Bcon003581.1
Basic Information
- Insect
- Bombus confusus
- Gene Symbol
- lilli
- Assembly
- GCA_014737475.1
- Location
- JACXIV010000035.1:3977609-3996176[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0019 29 3.5 10.8 44 130 19 111 16 121 0.61 2 2 2.1e-09 3.3e-05 23.1 0.3 327 381 185 240 172 256 0.79
Sequence Information
- Coding Sequence
- ATGGATCAGCCAAGGGATATACACGCTGGCATGGCCGTGAATCCAGACGCCCGAGACAGTACGACGCAGCAAATCCAATCGAAACTAGGCAACTATTCTCTGGTGAAGCATCTTCTGGACGAGCCGAAACGGCTGATCGGCATCGAGGGTGTACCGCCGAGTCCTGCTCCGCCCCCGGCCGCGTGCATTCGGCTGAGTTCCAGTTCGGTCGGCTCAAATTCCAGAAGCTCGCCTTCCTCCCAGGAATTCAAGAAACCCGGAGGACCGAGGACCGATGTTGGCGGTACGTCGTCGTCGATTTCGTCGTCGTCCTCGTCGTCGAGTCATCAACGCGGTGGTTTCGTGAAACCGGCCGATGGAAAGCCGCCGTACGGAGGCCGGGGTAGTTACCCCGGCCAGCCGGTGAAACACGGGGGTAACAGCAACGATCATCGGAGCCACGGTTTATTACCCGCCAAAGGGCCGCCCACGAATTCACCCGGGAACGGTACGCTCTTTGGCAATTCGAATATCGGGAATTCCAGCGGCAGCAGGCTTCACTCTGTCGGCAGCAGACTGTCCAGGTTACCTCTCGATAACGGAACGAGTTCAAGGCCCGGTCCAACCGAGAATTCCGCGGATGTAGAGAATATTTTAAAGGAAATGACCATGCCGCCCACGCCTCTGACGGCCATCGCCCAGACGCCGAGAAAGGAGCTGGAGTCGAAGTTCACGTTCAATCCTGTGCTGGCAAAGTTGACCGAGGTGACACCGCAGGAAGCCACGAAGCCTCGTAAGTAA
- Protein Sequence
- MDQPRDIHAGMAVNPDARDSTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPPSPAPPPAACIRLSSSSVGSNSRSSPSSQEFKKPGGPRTDVGGTSSSISSSSSSSSHQRGGFVKPADGKPPYGGRGSYPGQPVKHGGNSNDHRSHGLLPAKGPPTNSPGNGTLFGNSNIGNSSGSRLHSVGSRLSRLPLDNGTSSRPGPTENSADVENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVTPQEATKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00088814;
- 90% Identity
- iTF_00233220;
- 80% Identity
- -