Bcam006069.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus campestris
Gene Symbol
Hr39
Assembly
GCA_905333015.1
Location
HG995128.1:141714-150633[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3 1.7e+04 -6.4 5.5 151 163 48 60 23 102 0.49
2 5 2 1.1e+04 -4.7 10.5 44 163 317 407 283 447 0.45
3 5 3 1.7e+04 -6.7 11.1 69 160 441 532 414 549 0.56
4 5 1.6e-07 0.00091 18.6 0.1 1 19 615 633 615 638 0.95
5 5 3.9e-71 2.2e-67 228.2 0.0 90 408 675 992 636 992 0.76

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCTGGACCGGGCCCAGGGCCGGGTCCTGGTTGGTGGCCAACCTCACAGTCCTGGAAAACGAACTCCTGCACCGCTGCCTCCTCTGCTTCGTCCACTTGTTCAACCATTTCAGACAACTCCGCCTCCGTCTCTGCCTCTTGCACCACCTCTACGTCCTCCCTGGCGACCACCGCATCGGCCACTTCATCGACCAGCTGCTGTTCCTCCACCCCTGGCGGTCCTGGTGGACCGTCTTGCACGATCACCGCGGCCCGCTCCTCCGAAACGGGAAAGAACGTCTCCGTCACGACGATCAATGTACCCCCTACTAATCAGGACATGCACGATGGCAAGGGTATATGCAAGTACCTTGGCGGCCAGAATGGCGTGACAGTATCGGTAGTGTCAAGCTGTGGTTCCATACTGGGATGTGGAAACGCGAATGTTGTGTCTACCACGGGGATAGGCAGTAGCACCGGCACACAGAGTATTGGCATCGGAGTGAACATCCTTGACCAGAGCACGGCGGACGACGACGCGGAGGATAGCGACGTTGAGATAAGCAAAATCGACTTCCGAGGGGTGAATTTGCGTACGAAGAAGAAACGGGACGTGTCTGGTAGTCAGAGTCAAAGCGGTGAGAAAATCGGCGATGGAGAGATCGAGGATGGGAACGGTTGTTACGATGGAAGCGACGCGTCTCAGCAACAACCGGAGAGGCCTATGTCATGGGAGGGAGAACTATCCGATCAAGAAATGTCTTCCAATACGATTACAAATCAAGATACACACGAGGACACGTCGATGGAGGGTGTTCAAGTATGTGGCACGAGTCCCGGGCCGATGGAACAAAAATTTCCCGTAAAACCAGAGCCAGATTTTCAGTCCAACCCAGGTTTCACGTTTGGCTCTTTTCACGACACCGGATTACCTCTGAATCACGGCCAGCAGATACAACAGCcgcagcaacaacagcaacaacagcgCAACATTGAGAATCTCGAACAGACACAACAAAACGATTTGCCTCTTCTCGTAGGAAAATTACTCGGTGGTTACAATAGTTCGACTCCGAATCACAGTCCAGTGTTGAATCCTAGACACCATCTAACGAAGCATAGCCACACGAGATCGCAGGTGCCGTCACCGGACTCGGCCATTCATTCCGCGTACAGCGTATTCAGCTCCCCGACGCAAAGTCCTCACGCAACTCGCCACTCCCCCCTGGGCGCGGCAAGTCCAGTTCCATCTTCGTCGCTATCCTTGTCGCGACACAGTTTCAACAATTCCACTTCCTCGTTGTCGCTCTCGTTGTCGCACTCCCTCTCGAGAAACAATTCCGACGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTCAGCCCACCCACGCACTCGCCCGTCCAGCAACCGAGACATCCGCAGCATCACCAGCATCAAGTTGCTCAAGGAAGCCCGCTTCATCTGCCGGCAACCGCTTCTCCCGCCATTACTCATCACTACGCTTCGTCTGCACCGGGTTCCGAGCTATCTCCGGAAGGGCACGTTACCACGGAAGATCAGGAAGACTGTAGAATACCCTCGGCACCGTCCGGTATATCCACAAGGCAGCAACTAATTAATACCCCGTGTCCAATTTGCGGGGATAAGATCAGTGGTTTTCATTATGGAATATTCTCGTGCGAGTCGTGCAAGGGATTTTTCAAACGCACCGTCCAGAACCGAAAGAATTACGTGTGCCTTAGAGGCGCGGGCTGTCCAGTCACCGTTGTTACCAGGAAAAAATGCCCCGCCTGCAGATTCGAGAAGTGCCTCAATATGGGTATGAAGCTCGAGGCGATTAGGGAGGATCGCACCAGGGGTGGCAGAAGTACCTATCAGTGTACGTATACTTTTCCACCAAATTTTGTCGGTAGTTCCGCGGGTAACATGTCCAGCGACAAATTAGCTACCGGAGGAAATTGTAGTCCAGCTCCAGCTGGTAACGAACATCACTATGCGGCAAGGCACCATTCGAATCACTCCCATAAGATACAAGTGGTACCGCAACTTCTACAGGATATCATGGACGTGGAGCACTTGTGGCATTACAATGATAACGATCGTATGACCGGGATTCAAAACGCAGGAACGAATTTTACTAGAAACAACGATTCAATGTTATCGAGCGTTAGAAGCAACGGAGGATCTGGAATAGAGAACGACACAGGTTCGGGCATCGAGTGTTCCTCCACTAGAACTACAGGAAATGGTAATCCTAGTAATAGAAGAGATAACAGATCATGCTCCAATGTTTCTAACGTTGGTAACGAGCAACATGCTGCACCGGTTGGTAACAGTTCTCAAATCAACAATACGAATTGTAATCCGACTCAACATCCTGATTTTCTCTCCAACCTCTGCAATATCGCTGATCATCGACTCTACAAAATAGTGAAGTGGTGCAAGAGTTTGCcgttatttaaaaacatttcgaTCGATGATCAGATCTGTCTGTTGATTAATTCTTGGTGCGAGCTACTGCTCTTCTCATGCTGCTTTCGCAGTATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGTAAGTCGATTACACTGGAACAAGCTAGGCAGCTTGGCTTAGCGACCTGCATCGAGAGGATGCTTGCGTTTACTAACAATTTGAGAAGGCTCCGAGTAGATCAGTACGAATACGTGGCGATGAAGgtAATAGTACTGTTAACCTCTGATACAAGTGAACTGAAAGAACCTGAAAAAGTTAGAGCATCTCAGGAAAAGGCCTTACAAGCGTTGCAACAATATACTATCGCGAGGTACCCAGAAATGCCTGCTAAGTTTGGTGAATTATTATTGAGAATTCCGGATTTACAAAGAACGTGCCAAGCGGGAAAGGAATTATTAAGTGCTAAACGTGCCGAAGGAGAAGGCAGCTCGTTTAATCTGTTGATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGPGPGWWPTSQSWKTNSCTAASSASSTCSTISDNSASVSASCTTSTSSLATTASATSSTSCCSSTPGGPGGPSCTITAARSSETGKNVSVTTINVPPTNQDMHDGKGICKYLGGQNGVTVSVVSSCGSILGCGNANVVSTTGIGSSTGTQSIGIGVNILDQSTADDDAEDSDVEISKIDFRGVNLRTKKKRDVSGSQSQSGEKIGDGEIEDGNGCYDGSDASQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGTSPGPMEQKFPVKPEPDFQSNPGFTFGSFHDTGLPLNHGQQIQQPQQQQQQQRNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHATRHSPLGAASPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPATASPAITHHYASSAPGSELSPEGHVTTEDQEDCRIPSAPSGISTRQQLINTPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVVTRKKCPACRFEKCLNMGMKLEAIREDRTRGGRSTYQCTYTFPPNFVGSSAGNMSSDKLATGGNCSPAPAGNEHHYAARHHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRMTGIQNAGTNFTRNNDSMLSSVRSNGGSGIENDTGSGIECSSTRTTGNGNPSNRRDNRSCSNVSNVGNEQHAAPVGNSSQINNTNCNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733987;
90% Identity
iTF_00228733;
80% Identity
iTF_00215733; iTF_00215767; iTF_00215743;