Basic Information

Insect: Boloria selene
Gene Symbol: -
Assembly: GCA_905231865.2
Location: HG993135.1:4630675-4639038[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0076 0.71 11.1 1.2 3 23 206 227 205 227 0.96

2 23 0.24 22 6.4 0.3 1 22 626 647 626 647 0.95

3 23 1.6 1.5e+02 3.7 0.5 1 22 689 710 689 712 0.83

4 23 0.059 5.5 8.3 1.4 3 21 723 741 722 742 0.93

5 23 3.9 3.7e+02 2.5 0.3 2 22 750 770 749 772 0.86

6 23 0.097 9.1 7.6 1.1 3 21 792 810 790 813 0.93

7 23 0.024 2.3 9.5 4.3 1 23 819 842 819 842 0.95

8 23 0.22 21 6.5 0.0 1 23 868 891 868 891 0.90

9 23 0.013 1.2 10.3 3.4 1 23 896 918 896 918 0.97

10 23 0.012 1.2 10.4 0.2 1 23 924 947 924 947 0.95

11 23 0.00011 0.011 16.8 1.3 1 23 959 981 959 981 0.97

12 23 0.001 0.095 13.8 4.0 1 23 1024 1047 1024 1047 0.96

13 23 0.0059 0.55 11.4 1.1 1 23 1107 1130 1107 1130 0.96

14 23 0.00072 0.067 14.3 2.1 2 23 1154 1176 1153 1176 0.95

15 23 0.061 5.7 8.2 0.1 2 23 1182 1204 1181 1204 0.93

16 23 0.0061 0.57 11.4 0.2 1 21 1248 1268 1248 1269 0.95

17 23 0.11 10 7.5 0.5 1 23 1279 1301 1279 1301 0.91

18 23 0.00019 0.017 16.1 0.4 2 23 1390 1412 1390 1412 0.93

19 23 1.3e-07 1.2e-05 26.1 1.1 3 23 1419 1439 1418 1439 0.98

20 23 0.0062 0.58 11.4 0.6 1 23 1456 1479 1456 1479 0.95

21 23 0.085 7.9 7.8 0.0 1 23 1499 1521 1499 1521 0.97

22 23 0.019 1.8 9.8 0.6 1 23 1527 1550 1527 1550 0.95

23 23 0.00025 0.023 15.8 0.8 1 23 1558 1581 1558 1581 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0076	0.71	11.1	1.2	3	23	206	227	205	227	0.96
2	23	0.24	22	6.4	0.3	1	22	626	647	626	647	0.95
3	23	1.6	1.5e+02	3.7	0.5	1	22	689	710	689	712	0.83
4	23	0.059	5.5	8.3	1.4	3	21	723	741	722	742	0.93
5	23	3.9	3.7e+02	2.5	0.3	2	22	750	770	749	772	0.86
6	23	0.097	9.1	7.6	1.1	3	21	792	810	790	813	0.93
7	23	0.024	2.3	9.5	4.3	1	23	819	842	819	842	0.95
8	23	0.22	21	6.5	0.0	1	23	868	891	868	891	0.90
9	23	0.013	1.2	10.3	3.4	1	23	896	918	896	918	0.97
10	23	0.012	1.2	10.4	0.2	1	23	924	947	924	947	0.95
11	23	0.00011	0.011	16.8	1.3	1	23	959	981	959	981	0.97
12	23	0.001	0.095	13.8	4.0	1	23	1024	1047	1024	1047	0.96
13	23	0.0059	0.55	11.4	1.1	1	23	1107	1130	1107	1130	0.96
14	23	0.00072	0.067	14.3	2.1	2	23	1154	1176	1153	1176	0.95
15	23	0.061	5.7	8.2	0.1	2	23	1182	1204	1181	1204	0.93
16	23	0.0061	0.57	11.4	0.2	1	21	1248	1268	1248	1269	0.95
17	23	0.11	10	7.5	0.5	1	23	1279	1301	1279	1301	0.91
18	23	0.00019	0.017	16.1	0.4	2	23	1390	1412	1390	1412	0.93
19	23	1.3e-07	1.2e-05	26.1	1.1	3	23	1419	1439	1418	1439	0.98
20	23	0.0062	0.58	11.4	0.6	1	23	1456	1479	1456	1479	0.95
21	23	0.085	7.9	7.8	0.0	1	23	1499	1521	1499	1521	0.97
22	23	0.019	1.8	9.8	0.6	1	23	1527	1550	1527	1550	0.95
23	23	0.00025	0.023	15.8	0.8	1	23	1558	1581	1558	1581	0.96

Sequence Information

Coding Sequence: ATGAATGTGAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGGTGCGAATTACTACCGATATTTCCTACCACCAGTTCGGATGACTCTGAACCTCCTGTCCTAGCTTCGAAAATCAAAGATTGCGTGGCAGTGCAGATAAGCGAAAATGACGACCTGCCAACTAATGTCTGCAGGAAATGCATGGACAATGTAAATAACTGGCACATTTTTAAAACAATATGTGAAAGAACACAAAACAAGCTACAGTCTCTGATTAATAAGGAGAGCAACCTACTAGAAGAGGTGAAAATAAAAAATGAACCATTATCAGATGAAGCTTATGATGATGGAGTGGTTATTGATGGATCATACCCTGACATTGAGAACAATGATTCACTTAAAGTTCAGCCCGAAGGTCCACCAATATTGGCTTCGTTGGGACTCACACCGAGGAGTGATAAGGGCATGGAAAGCGAGAAAGATGAAGATTATGAAGAGGAAGAGGAACAAGAACTCCTAGAGCCTCACTCATATGTTCCAAATATGCCGGAAGTTTCCATTACTGTGATGCGCCCGTCTGGAGAAACACTTCACGCCCGCCAGGGCATACAACAACTTGCTTCCAAGGACTGTCTAGTATGTGATAGATCTTACAGATATTCTCATAATGCAAGAAGACATGAACTCACAGCTCACGGCTTCGATAGATACACAAATAAGGTTACAAATTTAAAATCTCGCGCCCACATGCAACCTAAGTTTAGACCTAACCCGTTCAACCCGAAAGCACGCCTCATGCCAAATCCGATTAGCCACAAAATGCAATACCATCATTCCAAGTCAATGCCAAACAAAATGATTCCACATAAAGTTATTGCTCCATCAAAACCTATACCGATTAGAACCCCAAAAACTCCTCAGAATAATTTACCCTATCCTCTAAGGATTAAAGCTTTAAAAGACTTGCAAATAAAGAAAAAAGAACCTCAAATTTTGAAGACTCTACTTACGACTAAACCAGAGGTTTTGGTTTCCGAACCTGAGATCATGAATTCGGGTCCTGAAAGTCCGGAAACGTTGATATCTGAACCCGAAATAGCATCATTCCAAGTAGAGACTATTCTATCAGAGCCAGATACCTTTGTCAATACTAATCAGGAAGATGATGAGGATGAAAACAATCATGGGCAAAACTATGATACTGTAGATATGGATTCAGAAAATGAAATAGAAATAGCTCGTCAGCGGGAGAATGATGGTGAAGCTGAGGAGAATCTAGCAGAAGTTGATGGAGAAGATAATACTCAAGATGAAAACAATATAGAAGAAAATCATGATGAACATAATGAAAAACAAAATCACGAAGATAATGGGGAAAGTCAAGATGTCGATATGGAAAACAATATAGACAGAGAAGCTGATGATGAAAACGCCAAAGAAAATGATTATGAGAATCATGAAAAAGAAAATGATTATGAGAATCATGAAAAAGAAAATGAGATTATAAATCATGAAGAAAATGAAGACGATGATGACTTACCTATGACTATTGCCCCTGTCGTCGAGATAAACGAGGACTTGCATATTAACTCGTATAATAGCGATGGTAACGGAGAAGAATTAGATGAAACTGTTGATCCCAATGACACAGTCGATGGTGACGGTGATGTTGAAGAAGGTGAAGGTGAAGGAGAAGGCGATGGCGAAGAAGAAAAAGATCTTGATCCTAACAAAGTATACGTTACTAAAACACAACGAGACTTTATACTTAAGTATCGTGACATTATCGAACAAATAAACACAAAACGTTGTTTATGTTGTAATAAAGAACATCCGCGTAGAAAGGCCGTCATCCAACACTTGCAAAAGAACGGCCATAAAGTTCCTAAACACACGTGCTATAACTGCGTAGTCACGTTTGGACACATCGGAGCCTTGCTCAGCCACATGAGATCTAATACGTGCACAGATCTGTGGAAAATTATTTACAACGAAAATGGAATTACGGATGATATAGTATTGGAAGATGAACCCAAAGATTCCAAAGCTCAATATAAAGATATACTTAACGCTAGGTCATATACATGCAAATTGTGCCCAGCCAAGTTTCAACTAAAGCAATTTATTATGAAACATGTCCTTGACGTACACGAGGATGGCCAATCTCGTGTTCCCAATTCGTGTGTGCACTGCGGGTTACGCTTCAAAGATAAAAGTTTCGGAAAAAGGCATATTCGAAACGGAGATTGTACCGTGAATATCTCTTGCGATATATGTTATGAAAAGTTTTTGAACTTACAACACTTTAACGACCATGCAATAGCAGTACATGCTGGTAGCTTCGATCCCGAAAACCAGAATAAGTGTGTCGACGGCCGACCAACAGATTGTCCCATATGTGGAAAGAAGAACACCAGTTACCCGAATTTGGTCAAACATTTGAAATGTATTCACAATGAAGAAAAGCCTCACCACTGCCAACATTGCGAAGCCAAATTCGAGCAAACTGCTGATCTTAACAAACACATTTACATGGAACATTCTGATAGGACACTAGGTATGCAGTCTTCTGAGCCTGATATGTCGCTTGTAAAAGAAGAAGCTGAAGAGTACCATTATTCGTGTACTGAATGCAATTCAATTTTCGAGACTGTCGATGCGTGGACAGACCATCAGGTCGCCGAACATAATCAAGTGGCACACCATTGTGATCAGTGCGAAAAGAAATTCTTACGCCCATCAGAACTTGCAGAACATAAAAATACGCATTTGAGAGTTAAATTCTATCCGTGTAGTGTATGTTCGAACTCGTACAGTACGCCGCAAAAATTATCGGAACACGTTCAACAGGTTCATCCTGGTTCATCGAAAATACCCGGTGAGTCGGAGTTTTTCTGCGAAATTTGTGTAAGGTCGTTTAAGAGTCGCCAAGCTTATTCTAACCATATGCGTATACATGCAAAAGTGCCTACAACTAATAGAAAGCCTGGAGAAACTAAAGGATTTGCTCCTCAAATTATAGGGAAACCGATTCGCCAGTTTGCAATGCAACCTGGATTTAGCCCATATGTTCCCAACGCACCTTATTGTTGCGATATTTGCGGTAAAGGATTTATGCACAAGAAAAATATATGGAAGCACAAAAAAGTGCTACACGCTGACCTTCTTGCTGACAGAAATGACAGTGAGGAAAATACAATGCAGGCGTCTACTGAAGAAGACGATTATAATGTAGATGAAAATGGCGCTATCTTGTCAACTCCGCAATTTAACAGTTTTAATTTCACTACTTTATCGAATAGCATGCAGCAAACTTCCCAAGATGCCTTACCATACTCATGCGAATTGTGCTTAAAGAGATTCCCGTTAAGGACAAGCCTTTGGAAACACAAACGCGCCAAACACGGAATCATTAACGCCAGTGCTAATAGCTCTGAAACCCAAACGCAACCACAAAGCGAAGGCACGAGATCCAGTTGCACCATATGCAAAATATCCTTCACTGACAAAAAATCGTATTACCGTCACAGAAAGAATGTACACAAATCGTCTGTACAGATGTGTAAAATTTGTGGAAAACCACTGAACTCGACGTTAGAGCTATACGAGCATCTCAAAGCTGCGCATGCTCGGGAACTACTAGGTTATAATGCAACCCAAGGCTCGAGTAAATCTCAAGATGTTAGCCAAGATATGGACGCAGAATACGACGGGGACCAGGACTCTGTAGATCCCAGCATCGACTACCAAGCGCGATACCCTTGCGATAATTGTGGAAAGCAATTTGTAGGACTACTAGCCTTGCAAAACCATCAATGTATCAACCAAATTCAAAGCCAACCTCAAACTTTTGATTGCGAAATATGCCACAAGAGCTATTTAACTATTGCTGCTCTCAAGAGTCACCGTGGGTGGCACTTACGTTCGCCAGATGGCAAGGCCGCAGCGAACAACACTGGTCTATGGATGCCTCAGAATAAAGTTACGAGCAAAGTTAGTAAGCACGAAGTAGTTGACATTGCTCCAAATACCCGCGCATCGTCTACTCCGGCCAACTTGGCCAAAAGACGACTACCACCTGAGGTAGAAGTGACAGTTGTAAATCCTAATAAGAAACTACGATCAGACGATTCCATTGAAATGGACCATCAAAATAATTTATCAGGTGGTCCAGAAGACAGATACTGCAACCTCTGTGACAAGGAATTCACAAAGCGGGCGGCGTATCAGCGTCACATGGACGAGGTACATCAACCAAACTCTGTGTTTTGCCCAGTTTGCGACAAGTCGTTTACAAGAAAATCTACCTTAATTGTGCATATGAAGAAACATTACGAAGGCGGTGAAGGAAGTTCTGGGACCCAAGTCGATGATGATGCGCATGCTTGTGATGTTTGTGGTGCGCAGTTTGATAGTCTGAAAGCTTTGAATTCCCACCATGCGACGGAGCATGGAGAAGACTCCGGGGCTTCGGAAGACGATGGTGGTACGATAGCACCACCAGGGGAGTTCACTTGCGGCCAGTGTGGAGATGGCGTAGCGACCCCCCGGGATCTTATAGCTCATCGAACCATGCATGCGACTCCCACTAAATTCTTTTGTAACATTTGCAAGGTATACTTCGCGAGAGCACTCGATCTGTCCTCCCACACTCGCGCAAGGCACGCTGATAACGAAAAAGTCTATTTCCCCTGCGCTATGTGCGACCGGTTTTATATGAATAAGAAGAGTTTACAAAGACACATTGAAATGTACCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRCELLPIFPTTSSDDSEPPVLASKIKDCVAVQISENDDLPTNVCRKCMDNVNNWHIFKTICERTQNKLQSLINKESNLLEEVKIKNEPLSDEAYDDGVVIDGSYPDIENNDSLKVQPEGPPILASLGLTPRSDKGMESEKDEDYEEEEEQELLEPHSYVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCDRSYRYSHNARRHELTAHGFDRYTNKVTNLKSRAHMQPKFRPNPFNPKARLMPNPISHKMQYHHSKSMPNKMIPHKVIAPSKPIPIRTPKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTTKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPDTFVNTNQEDDEDENNHGQNYDTVDMDSENEIEIARQRENDGEAEENLAEVDGEDNTQDENNIEENHDEHNEKQNHEDNGESQDVDMENNIDREADDENAKENDYENHEKENDYENHEKENEIINHEENEDDDDLPMTIAPVVEINEDLHINSYNSDGNGEELDETVDPNDTVDGDGDVEEGEGEGEGDGEEEKDLDPNKVYVTKTQRDFILKYRDIIEQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDSKAQYKDILNARSYTCKLCPAKFQLKQFIMKHVLDVHEDGQSRVPNSCVHCGLRFKDKSFGKRHIRNGDCTVNISCDICYEKFLNLQHFNDHAIAVHAGSFDPENQNKCVDGRPTDCPICGKKNTSYPNLVKHLKCIHNEEKPHHCQHCEAKFEQTADLNKHIYMEHSDRTLGMQSSEPDMSLVKEEAEEYHYSCTECNSIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQVHPGSSKIPGESEFFCEICVRSFKSRQAYSNHMRIHAKVPTTNRKPGETKGFAPQIIGKPIRQFAMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLADRNDSEENTMQASTEEDDYNVDENGAILSTPQFNSFNFTTLSNSMQQTSQDALPYSCELCLKRFPLRTSLWKHKRAKHGIINASANSSETQTQPQSEGTRSSCTICKISFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNATQGSSKSQDVSQDMDAEYDGDQDSVDPSIDYQARYPCDNCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYLTIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTSKVSKHEVVDIAPNTRASSTPANLAKRRLPPEVEVTVVNPNKKLRSDDSIEMDHQNNLSGGPEDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGTQVDDDAHACDVCGAQFDSLKALNSHHATEHGEDSGASEDDGGTIAPPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVYFPCAMCDRFYMNKKSLQRHIEMYH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00897124;
90% Identity: iTF_00212795;
80% Identity: -