Basic Information

Insect: Boloria euphrosyne
Gene Symbol: -
Assembly: GCA_951802675.2
Location: OX637874.1:10945192-10953926[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0036 0.36 12.2 1.0 3 23 206 227 205 227 0.96

2 22 0.26 25 6.4 0.3 1 22 614 635 614 635 0.95

3 22 1.7 1.7e+02 3.7 0.5 1 22 677 698 677 700 0.83

4 22 0.063 6.2 8.3 1.4 3 21 711 729 710 730 0.93

5 22 0.1 10 7.6 1.1 3 21 780 798 778 801 0.93

6 22 0.026 2.6 9.5 4.3 1 23 807 830 807 830 0.95

7 22 0.24 24 6.5 0.0 1 23 856 879 856 879 0.90

8 22 0.014 1.4 10.3 3.4 1 23 884 906 884 906 0.97

9 22 0.0088 0.87 11.0 0.2 1 23 912 935 912 935 0.95

10 22 0.00012 0.012 16.8 1.3 1 23 947 969 947 969 0.97

11 22 0.0011 0.11 13.8 4.0 1 23 1012 1035 1012 1035 0.96

12 22 0.0063 0.62 11.4 1.1 1 23 1094 1117 1094 1117 0.96

13 22 0.00076 0.075 14.3 2.1 2 23 1142 1164 1141 1164 0.95

14 22 0.065 6.4 8.2 0.1 2 23 1170 1192 1169 1192 0.93

15 22 0.0065 0.64 11.4 0.2 1 21 1236 1256 1236 1257 0.95

16 22 0.00092 0.091 14.1 0.6 1 23 1267 1289 1267 1289 0.93

17 22 0.0002 0.02 16.1 0.4 2 23 1378 1400 1378 1400 0.93

18 22 1.3e-07 1.3e-05 26.1 1.1 3 23 1407 1427 1406 1427 0.98

19 22 0.0066 0.65 11.4 0.6 1 23 1444 1467 1444 1467 0.95

20 22 0.11 11 7.6 0.0 1 23 1486 1508 1486 1508 0.98

21 22 0.021 2 9.8 0.6 1 23 1514 1537 1514 1537 0.95

22 22 0.00026 0.026 15.8 0.8 1 23 1545 1568 1545 1568 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0036	0.36	12.2	1.0	3	23	206	227	205	227	0.96
2	22	0.26	25	6.4	0.3	1	22	614	635	614	635	0.95
3	22	1.7	1.7e+02	3.7	0.5	1	22	677	698	677	700	0.83
4	22	0.063	6.2	8.3	1.4	3	21	711	729	710	730	0.93
5	22	0.1	10	7.6	1.1	3	21	780	798	778	801	0.93
6	22	0.026	2.6	9.5	4.3	1	23	807	830	807	830	0.95
7	22	0.24	24	6.5	0.0	1	23	856	879	856	879	0.90
8	22	0.014	1.4	10.3	3.4	1	23	884	906	884	906	0.97
9	22	0.0088	0.87	11.0	0.2	1	23	912	935	912	935	0.95
10	22	0.00012	0.012	16.8	1.3	1	23	947	969	947	969	0.97
11	22	0.0011	0.11	13.8	4.0	1	23	1012	1035	1012	1035	0.96
12	22	0.0063	0.62	11.4	1.1	1	23	1094	1117	1094	1117	0.96
13	22	0.00076	0.075	14.3	2.1	2	23	1142	1164	1141	1164	0.95
14	22	0.065	6.4	8.2	0.1	2	23	1170	1192	1169	1192	0.93
15	22	0.0065	0.64	11.4	0.2	1	21	1236	1256	1236	1257	0.95
16	22	0.00092	0.091	14.1	0.6	1	23	1267	1289	1267	1289	0.93
17	22	0.0002	0.02	16.1	0.4	2	23	1378	1400	1378	1400	0.93
18	22	1.3e-07	1.3e-05	26.1	1.1	3	23	1407	1427	1406	1427	0.98
19	22	0.0066	0.65	11.4	0.6	1	23	1444	1467	1444	1467	0.95
20	22	0.11	11	7.6	0.0	1	23	1486	1508	1486	1508	0.98
21	22	0.021	2	9.8	0.6	1	23	1514	1537	1514	1537	0.95
22	22	0.00026	0.026	15.8	0.8	1	23	1545	1568	1545	1568	0.96

Sequence Information

Coding Sequence: atgaatGTGAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGTTGCGAATTACTACCGATATTtcctaccaccagttcggatgACTCTGAACCTCCTGTCCTAGCTTCGAAAATCAAAGATTGCGTGTCAGTGCAGATAAGCGAAAATGACGACCTGCCAACTAATGTCTGCAGGAAATGCATGGACAATGTAAATAACTGgcacatttttaaaacaatatgtgAAAGAACACAAAACAAGCTACAGTCTCTGATTAATAAGGAGAGCAACCTACTAGAAGAGgtgaaaataaaaaatgaaccaTTATCAGATGAAGCTTATGATGATGGAGTGATTATTGATGGATCATACCCTGACATTGAGAACAATGAGTCACTTAAAGTTCAGCCCGAAGGTCCACCAATATTGGCTTCGTTGGGACTCACACCGAGGAGTGATAAGGGCATGGAAAGCGAGAAAGATGAAGATTATGAAGATGAAGAGGAACAAGAACTCCTAGAGCCTCACTCATATGTTCCAAATATGCCGGAAGTTTCCATTACCGTGATGCGTCCGTCTGGAGAAACCCTTCACGCACGCCAGGGCATACAACAACTTGCCTCCAAGGACTGTCTAGTATGTGGTAGATCTTACAGATATTCTCATAATGCAAGAAGACATGAACTTACAGCTCACGGCTTCGATAGATACACAAATAagattacaaatttaaaatctcGTGCCCACATGCAACCTAAGTTTAGACCTAACCCGTTCAATCCGAAAGCACGCCTCATGCCAAATCCGATTAGCCACAAAATGCAATATCATCATTCCAAGTCAATGCAAAATAAAATGATTCCACACAAAGTTATTGCACAACCAAAACCTATACCGATTAAAACCCCAAAAATTCCCCAGAATAATTTACCCTATCCGCTTAGGATTAAAGCTTTAAAAGACTTGCAAGTAAAGAAAAAAGAACCTCAAATTTTGAAGACTCTTCTTACGACTAAGCCAGAGGTTTTGGTTTCCGAACCTGAGATAATGAATTCGGGTCCTGAAAGTCCGGAAACGTTGATATCTGAACCCGAAATAGCATCTTTCCAAGTAGAGACTATTCTGTCGGAGCCAGATACTTTTGTCAATACTAATCAGGAAGATGATGAGTATGAAAACAATCATGGGCAAAACTATGATACTGTAGATATGGATTCTgaaaatgaaatagaaatagCTCGTCAGCGAGAGAATGATGGCGAAGCTGAGGAAAATCCAGCAGAAGTTGATGGAGAAGATAATACTCAAGATGAAAACAATATAGAAGAAAATCATGATGAAgataatgaaaaacaaaatcacGAAGACAATGGGGAGAGTCAAGATGTCGATATGGAAAACAATATAGATGGAGACGCTGATGATGATAACGCCAAAGAAAATGATTATGATAATcatgaaaaagaaaatgaaattatgaaTCATGAAGAAAATGAAGAAGATGATGACTTACCTCCTATGACAATTGCCCCTGTCGTCGAGATAAACGAGGACATGCAAACTAATTCGTATAATAGTGACGGTAACGTGGAAGAATTAGACGAAACTGTTGATCCCAATGATACAGTCGATGGTGACGGTGATGGTGAAGAAGGTGAAGGCGAAGGTGAAGATGAAAAGGATCTTGATCCTGACAAAGTATACGTCACTAAAACACAGCGAGACTTTATATTAAAGTATCGTGATATCATCgaacaaataaacacaaaacgTTGCTTATGTTGTCACAAAGAACATCCTCGCAGAAAGGCCGTCATTCAACACTTGCAAAAGAACGGCCATAAAGTTCCTAAACACACGTGTTATAACTGCGTGGTCACGTTTGGTCACATCGGAGCCTTGCTCAGCCACATGAGATCTAATACTTGCACAGATCTGTGGAAAATTATTTACAACGAAAATGGAATTACAGATGATATAGTATTGGAAGATGAACCCAAAGATTCCAAAGCTCAATATAAAGATATACTTAACGCTAGATCATATACATGCAAATTGTGCCCAGCCAAATTTCAACTAAAGCAATTCATTATGAAACATGTCCTCGACGTGCACGAGGATGGCCAATCTCGTGTTCCGAACTCTTGTGTGCACTGTGGACTACGCTTCAAAGATAAAAGCTTTGGGAAAAGGCATATTCGAAATGGAGATTGTACCGTGAATATCTCTTGCGATATATGTTATGAAAAGTTTTTGAGCTTACAAGACTTTAACGACCATGCAATAGCAGTACATGCGGGTAGCTTCGATCCCGAAAACCAGAATAAGTGTGTCGACGGCCGACCAACAGATTGTCCCATATGTGGAAAGAAGAACACTAGTTACCCGAATTTGGTGAAACATTTGAAATGTATACACAATGAGGAAAAGCCTCACCACTGCCAACATTGCGAAGCCAAATTCGAGCAAACTGCTGATCTTAACAAACACATTTACATGGAACATTCTGATAGGACGCTAGGTATGCAGTCTTCTGAGCCTGATATGTCGTTTGTGAAAGAAGAAGCTGAAGAGTACCATTATTCGTGTACGGAATGCAATTCTATTTTCGAGACTGTCGATGCGTGGACTGACCACCAGGTCGCTGAACATAATCAAGTGGCACACCATTGTGATCAGTGTGAAAAGAAATTCTTACGCCCATCAGAACTTGCAGAACATAAAAATACCCATTTAAGAGTTAAATTCTATCCGTGTAATGTATGTTCCAACTCATACAGCACGCCGCAAAAATTATCGGAACACGTTCAACAGGTCCACCCTGGCGCAGGGAAAGTCCCTGCTGAAACGGAGTTTTTCTGTGAAATTTGTGTAAGGTCGTTTAAGAGTCGCCAAGCTTATTCTAACCATATGCGTATACATGCAAAAGTGCCTACAACTAATAGAAAACCTGGAGAACCTAAGGGATTCGCGCCTCAAATTATAGGAAAACCGATCCGCCAGTTTTCAATGCAACCTGGATTTAGCCCATACGTTCCAAACGCACCTTATTGCTGCGATATTTGTGGTAAAGGTTTTATGCACAAGAAAAATATATGGAAGCACAAAAAAGTGCTACACGCTGACCTTCTTGCAGACAGAAATGACAGTGAGGAGAACACAATGCAGGCGTCTACTGAAGAAGACGATTATAATGTTGACGAAAATGGCGCTATCTTGTCAACTCCGCAATTCAACAGTTTTAATTTCACTAATTTATCGAATAGTATGCAACCTTCTCAAGATGCCTTACCATACTCTTGCGAACTGTGCTTGAAGCGATTCCCGTTAAGGACAAGCCTTTGGAAACACAAACGTGCCAAACACGGAATCATTAACGCCAGTGCTGGCAATAGCTCTGAAACCCAAACGCAACCACAAGGCGAAGGTACGAGATCCAGTTGTACCATATGTAAAATATCGTTCACGGACAAAAAATCATATTACCGTCACAGAAAGAATGTACACAAATCGTCTGTACAGATGTGTAAAATTTGTGGAAAACCACTTAACTCGACGTTAGAGCTTTACGAGCATCTTAAAGCAGCGCATGCTCGGGAACTTCTAGGTTATAATGCAAATCAAGGCTCGAGTAAATCTCAAGATGTAAGCCAAGATATGGACGCAGAGTACGACGGGGACCAAGACTCTGTAGACCCTAGCATCGACTACCAGGCGCGTTACCCTTGCGATAATTGTGGAAAACAATTTGTAGGACTACTAGCCTTGCAAAACCATCAATGTATCAACCAAATTCAAAGCCAACCTCAAACTTTTGATTGCGAAATATGCCACAAAAGCTACACATCTATTGCTGCTCTCAAGAGTCACCGCGGGTGGCATTTACGTTCGCCAGATGGCAAGGCCGCAGCAAACAACTCTGGTTTATGGATGCCTCAGAATAAAGTTACAAGCAAAGTTAGTAAGCACGAAGTAGTTGACATTGTTCCAAATACCCGCGCATCGTCTGCGTCGGCCAACTTGGCTAAAAGACGACTTCCACCCGAGGTAGAAGTAACTGTAGTAAATCCCAATAAGAAACTACGGTCAGACGATTCCATTGAAATGGACCACCAAAATAGTTTATCTGGTGGTGCCGAAGATAGGTACTGCAATCTCTGTGACAAAGAATTTACTAAGCGAGCGGCGTATCAGCGTCATATGGACGAGGTACATCAGCCGAATTCTGTGTTTTGCCCTGTTTGCGACAAGTCGTTTACACGAAAATCTACCTTAATTGTGCATATGAAGAAACATTACGAAGGCGGTGAAGGAAGTTCTGGAACCCAAGTTGATGATGATACGCATGCTTGTGATGTTTGTGGTGCGCAGTTTGATAGCCTGAAAGCTTTGAATTCCCACCATGCGACGGAGCATGGAGAAGACTCCGGGGAGTCGGAAGATGATGGTGCAATAGCACCACCAGGGGAGTTCACTTGCGCCCAGTGTGGAGATGGCGTAGCGACCCCTCGGGATCTTATAGCTCATCGAAGCATGCACGCGACCCCTACTAAATTCTTTTGTAACATTTGCAAGGTATACTTCGCGAGAGCACTCGATCTATCCTCCCACACTCGCGCAAGGCACTCTGATAACGAAAAAGTCTATTTCCCCTGTGCTATGTGCGACCggttttatatgaataaaaagagTTTACAAAGACACATCGAAATGTACCACTGA
Protein Sequence: MNVNYDRVCRLCLSSRCELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDDLPTNVCRKCMDNVNNWHIFKTICERTQNKLQSLINKESNLLEEVKIKNEPLSDEAYDDGVIIDGSYPDIENNESLKVQPEGPPILASLGLTPRSDKGMESEKDEDYEDEEEQELLEPHSYVPNMPEVSITVMRPSGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHGFDRYTNKITNLKSRAHMQPKFRPNPFNPKARLMPNPISHKMQYHHSKSMQNKMIPHKVIAQPKPIPIKTPKIPQNNLPYPLRIKALKDLQVKKKEPQILKTLLTTKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPDTFVNTNQEDDEYENNHGQNYDTVDMDSENEIEIARQRENDGEAEENPAEVDGEDNTQDENNIEENHDEDNEKQNHEDNGESQDVDMENNIDGDADDDNAKENDYDNHEKENEIMNHEENEEDDDLPPMTIAPVVEINEDMQTNSYNSDGNVEELDETVDPNDTVDGDGDGEEGEGEGEDEKDLDPDKVYVTKTQRDFILKYRDIIEQINTKRCLCCHKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDSKAQYKDILNARSYTCKLCPAKFQLKQFIMKHVLDVHEDGQSRVPNSCVHCGLRFKDKSFGKRHIRNGDCTVNISCDICYEKFLSLQDFNDHAIAVHAGSFDPENQNKCVDGRPTDCPICGKKNTSYPNLVKHLKCIHNEEKPHHCQHCEAKFEQTADLNKHIYMEHSDRTLGMQSSEPDMSFVKEEAEEYHYSCTECNSIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNVCSNSYSTPQKLSEHVQQVHPGAGKVPAETEFFCEICVRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIRQFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLADRNDSEENTMQASTEEDDYNVDENGAILSTPQFNSFNFTNLSNSMQPSQDALPYSCELCLKRFPLRTSLWKHKRAKHGIINASAGNSSETQTQPQGEGTRSSCTICKISFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQDVSQDMDAEYDGDQDSVDPSIDYQARYPCDNCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVVDIVPNTRASSASANLAKRRLPPEVEVTVVNPNKKLRSDDSIEMDHQNSLSGGAEDRYCNLCDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGTQVDDDTHACDVCGAQFDSLKALNSHHATEHGEDSGESEDDGAIAPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVYFPCAMCDRFYMNKKSLQRHIEMYH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00897124;
90% Identity: iTF_00213781;
80% Identity: -