Bsel022590.1
Basic Information
- Insect
- Boloria selene
- Gene Symbol
- clz9
- Assembly
- GCA_905231865.2
- Location
- HG993159.1:281758-283248[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-07 0.00014 22.1 0.0 1 38 18 56 18 61 0.86 2 2 1.2 6.7e+02 0.7 0.0 24 38 84 99 82 105 0.83
Sequence Information
- Coding Sequence
- ATGCCACGAGATTATAAAAGGCCTATTGGATGCAGGTCTTACAAAAACTATACAGAAGAAACATTAAAAAAAGTTTTAGACGAAATTAAATCAGGTAAAATCTCAACGCGGGCCGCATCCGAAAAATATGGCATTCACAGAAACACTTTATCATCAAAATTAAAAAACAAAGCACCACTAAAACACGGAGGTCAAACTGTATTTAATGAAGAAGAAGAACTTGCTTTGATATCACACATTACTGCATTGTCAGCCTTTGGATTTCCAATAACAACACTAGAGCTGCGCTGCATTGCTAAATCGTATTTGGAGAAACAAGGTAAAAAGGTGCTGAAATTCGCTAACAATTTGCCAGGCAAGGAGTGGGTGCATTCGTTTTTAAAGCGTCACAAGTCACTGTTGTCCAATCGAGTGGCTAGGAATATAACCCATGGTCGAGCAGAAATAAACGAAGTTATTGTTAACGAGTTTTTCGATAACTACGAAAAAGAAATCGCAAATGTCCCAGACACTAACATTTGGAATTATGACGAAACATGCTTAGTTGATGACCCAGGCTCGGTAAAAATTCTGACTAGAAGAGGGACGAAGTATCCCGAGACCATTAAAAACTCTTCTAAGGCAGCAACGTCGATAATGCTCTGCGGCAACGCAGCTGGCGAATTAGCCCCAGTATACGTAGTGTATAAAGCTGAAAATATGTGGGGGACGTGGGCAGAAAATGGTCCTCCACAAGCACGATACAATCGTACCAAATCTGGATGGTTTGACGCACGTTGTTTTGAGGACTGGTTTGAATACTTAATGCTGCCTATACTTAAAAAACAATCTGGTAAAAAAGTTTTGATTGGAGACAATCTCAGCTCGCACATAAGCCCGCACGTTATCTCTTTATGTGAAGCCAACAATATTGCGTTTATTGCTCTGCCTCCAAATGCTACGCACTTACTCCAACCACTAGACGTAGCATATTTTCGTCCAATGAAAATAGCATGGAGGAAGATATTAAACGAATGGAAAAATAATACACGTAATAGTAGAAGCTCCAGTGTGCCGAAAGACCAGTTCCCGATGCTCTTAAAACAAATGTTCCAAGAAATGGAAGCAAACTCTTCACAAAATTTAAATTCTGGTTTCAGAAAGTGTGGTTTGTTCCCCTTGAACCGAGATCCTGTATTGCAAAGAATACCAAATCAGCAGCTGGAGGCTACTGTCCCAGTTCGTGAATTATTAGGAGAGAGCTTTCTGGAGAATTTAAGATCTACAAGAGTGCAAATCACTGAAACAAGAACTTATCGAAGAAGAAGACGCGTAAACGTTCCCCCAGGTAAAAGTATTACAGCTGCAGATTTAGTAGAGGAAGAAACAACAGGTCGAGCTATCATTTCGTCTCCGCTTCACTCGGATTCTGATCAATCTTCAGAATTTGTTATGGAGGCATTGGGAACATCAAGGAACATCGAGAACGTAGATTCCAACCAGGAGTCATAA
- Protein Sequence
- MPRDYKRPIGCRSYKNYTEETLKKVLDEIKSGKISTRAASEKYGIHRNTLSSKLKNKAPLKHGGQTVFNEEEELALISHITALSAFGFPITTLELRCIAKSYLEKQGKKVLKFANNLPGKEWVHSFLKRHKSLLSNRVARNITHGRAEINEVIVNEFFDNYEKEIANVPDTNIWNYDETCLVDDPGSVKILTRRGTKYPETIKNSSKAATSIMLCGNAAGELAPVYVVYKAENMWGTWAENGPPQARYNRTKSGWFDARCFEDWFEYLMLPILKKQSGKKVLIGDNLSSHISPHVISLCEANNIAFIALPPNATHLLQPLDVAYFRPMKIAWRKILNEWKNNTRNSRSSSVPKDQFPMLLKQMFQEMEANSSQNLNSGFRKCGLFPLNRDPVLQRIPNQQLEATVPVRELLGESFLENLRSTRVQITETRTYRRRRRVNVPPGKSITAADLVEEETTGRAIISSPLHSDSDQSSEFVMEALGTSRNIENVDSNQES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01171408;
- 90% Identity
- iTF_01171408; iTF_00119546; iTF_00935676;
- 80% Identity
- -