Mlit007630.1
Basic Information
- Insect
- Macaria liturata
- Gene Symbol
- clz9
- Assembly
- GCA_964023185.1
- Location
- OZ026810.1:13129820-13131739[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-07 0.00025 21.3 0.0 2 39 19 57 18 61 0.87
Sequence Information
- Coding Sequence
- ATGCCACGAGATTATAAAAGGCCTATTGGATGCAGGTCTTACAAAAATTATACAGacgacacattaaaaaaaattttagaagaAATTAAATCAGGTAAAATCTCAACGCGGGCCGCATCCGAAAAATATGGCATTCACAGAAACActttatcattaaaattaaaaaacaaaacaccatTAAAACACGGAGGTCCAACTGTTTTTAGTGAAGAAGAAGAACTCGCTTTGATATCACACATAACTGCATTGTCAGCGTTTGGATTTCCAATAACAACACTAGAGCTACATTGCATTGCTAAATGGTATTTGGAGAGACAAGGTAGAAAGGTGCCGAAATTTGCTAACAATTTGCCAGGCAAGGAGTGGGTTTATTCGTTTTTAAAGCGTCACAAGTCACTGTTGTCCAATCGAGTGGCTAGGAATATAACCCATGGTCGAGCAGAAATAAATGAAGATATTGTTAACGAGTTTTTCGATAACTACGAAAAAGAAACCGAAAATGTCCCTGACTCTAACATTTGGAATTACGACGAAACATGTTTAGTTGATGACCCAGGCTCAGTAAAAGTTCTGACTAGAAGAGGGACGAAGTATCCTGAGACCATTAAAAACTCTTCTAAGGCAGCAACGTCGATAATGCTCTGCGGAAACGCAGCTGGCGAATTAGCCCCAGTATACGTAGTATATAAAGCTGAGAATATGTGGGGGACGTGGGCAGAAAATGGTCCTCCACAAGCAAGATACAATCGTACAAAATCCGGTTGGTTTGACGCACGTTGTTTTGAGGATTGGTTTGAATACACGATGCTGCCTATACTTAAAAAACAAACCGGTAAAAAAGTTTTGATTGGAGACAATCTCAGCTCGCACATAAGCCCGCACGTTATCTCTTTATGTGAAGCCAACAATATTGCGTTTATTGCTCTGCCTCCAAATGCTACGCACTTACTTCAACCACTAGACGTAGCATATTTTCGCCCTATGAAAATAGCATGGAGAAAGATATTAAACGAATGGAAAAATAATACACGTAATAGTAAAAGCTCCAGTGTCCCGAAAGACCAGTTCTCATTGCTCTTAAAACAAATGTTCCAAGAAATGGAAGCCAACACTCCGCAAAATTTAAAATCTGGTTTCAGAAAGTGTGGTTTGTTCCCCTTAAACCGAGATCCTGTATTGCAAAGAATGCCAAATCAGCAGCTGGAGGCTTCTGTCCCAGTTCGTGAATTATTAGGGGAGAGCTTTCTGGAGAATTTAAGATCTACAAGAGTGCAAGTCACTGAAACAAGGGCTTATCGAAGAAGGAGACGCGTAAACGTTCCACCGGGTAAAAGTATTACAGCTGCTGATTTAGTAGAGGAAGAAACAACAGGCCGAGATATAATTTTGTCTCCGCTTTCGGATTCTGATCAATCTTCAGAATTTGTTATGGAGGCATCGGAAACATCAAGAAACATCGAAAATGTAGATTCCAACCAGGAAACAGAAATAGTAGCCCCTACTATCTCCCCATCATCTACACAACgcaaaaaagaaagtataactGGGACTATCCTCTCATGTTCAATCCAAACGGATCAATCAATGGCAGATACAACACATGGGGAGCAATCTCATGGCACTTTGACAGCAGAAAGAAACATCGAGCCGCAACCAGGTACATCTTTTGGGGGACCACGAAAACGTAAACCTAAGAAATCTCTGCCGAGAGTCAAAAAATCAGCAAAAGGACCTGCTAAATTAAAAGGCAAACATGTCGTTAACtcgaaaaaaaagaaaatatatgtagttTCAGACGATGACAGTACAAGTGCGTCGTCAAATATATCATTCCAAGAAAGTGATTGCATTGCAGTACTAACTGGTGCGATGACGAAGAGGTACAGGGAGAAaatgagaaagaaaataatagcAGCATAG
- Protein Sequence
- MPRDYKRPIGCRSYKNYTDDTLKKILEEIKSGKISTRAASEKYGIHRNTLSLKLKNKTPLKHGGPTVFSEEEELALISHITALSAFGFPITTLELHCIAKWYLERQGRKVPKFANNLPGKEWVYSFLKRHKSLLSNRVARNITHGRAEINEDIVNEFFDNYEKETENVPDSNIWNYDETCLVDDPGSVKVLTRRGTKYPETIKNSSKAATSIMLCGNAAGELAPVYVVYKAENMWGTWAENGPPQARYNRTKSGWFDARCFEDWFEYTMLPILKKQTGKKVLIGDNLSSHISPHVISLCEANNIAFIALPPNATHLLQPLDVAYFRPMKIAWRKILNEWKNNTRNSKSSSVPKDQFSLLLKQMFQEMEANTPQNLKSGFRKCGLFPLNRDPVLQRMPNQQLEASVPVRELLGESFLENLRSTRVQVTETRAYRRRRRVNVPPGKSITAADLVEEETTGRDIILSPLSDSDQSSEFVMEASETSRNIENVDSNQETEIVAPTISPSSTQRKKESITGTILSCSIQTDQSMADTTHGEQSHGTLTAERNIEPQPGTSFGGPRKRKPKKSLPRVKKSAKGPAKLKGKHVVNSKKKKIYVVSDDDSTSASSNISFQESDCIAVLTGAMTKRYREKMRKKIIAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01171408;
- 90% Identity
- iTF_00213383;
- 80% Identity
- -