Ader001274.1
Basic Information
- Insect
- Anticlea derivata
- Gene Symbol
- clz9
- Assembly
- GCA_947579855.1
- Location
- OX388277.1:2269904-2271325[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-07 0.00036 20.3 0.0 2 39 19 57 18 61 0.83 2 2 0.52 5.1e+02 0.6 0.0 24 37 84 98 82 102 0.83
Sequence Information
- Coding Sequence
- ATGCCACGAGATTATAAAAGGCCTATTGGATGTAGGTCTTACAAAAACTATACAGAAGAAACATTTAATTTTTTTTTAGAAGAAATTAATTCAGGTAAAATCTCAACGCAGGCCGCATCCGAAAAATATGGCATTCACAAAAACACTTTATCATTAAAATTAAAAAACAAAACACCATTAAAACACGGACGCCAAACTGTATTTAGCGAAGAAGAAGAACTTGCTTTGATATCACACATAACTGCATTGTCAGCCTTTGGATTTCCAATAACAACACTAGAGCTACGCTGCATTGCTAAATCGTATTTGGAGAGACAAGGTAGAAAGGTGCCGAAATTTGCTAATAATTTGCCAGGCAAGGAGTGGATTTATTCGTTTTTAAAGCGTCACAAGTCACTGTTGTCCAATCGAGTGGCTAGGAATATAACCCATGGTCGAGCAGAAATAAACGAAGTTGTTGTTAACGAGTTTTTCGATAACTACGAAAAAGAAACCGAAAATGTCCCTGACACTAACATTTGGAATTATGACGAAACATGCTTAGTTGATGACCCAGGCTCAGTAATAGTTCTGACTAGAAGAGGGACGAAGTATCCCGAGACCATTAAAAACTCTTCTAAGGCAGCAACGTCGATAATGCTCTGCGGAAACGCAGCTGGCGAATTAGCCCCAGTATACGTAGTATATAAAGCTGAGAATATGTGGGGGACGTGGGCAGAAAATGGTCCTCCACAAGCAAGATACAATCGTACCAAATCTGGTTGGTTTGACGCACGTTGTTTTGAGGATTGGTTTGAATACACGATGCTGCCTATACTTAAAAAACAAACCGGTAAAAAAGTTTTGATTGGAGACAATCTCAGCTCGCACATAAGCCCGCACGTTATCTCTTTATGTGAAGCCAACAATATTGCGTTTATTGCTTTGCCTCCAAATGCTACGCACTTACTTCAACCACTAGACGTAGCATATTTTCGCCCTATGAAAATAGCATGGAGGAAGATATTAAACGAATGGAAAAATAATACACGTAATAGTAAAAGCTCCAGTGTGCCGAAAGACCAGTTCCCGATGCTCTTAAAACAAATGTTCCAAGAAATGGAAGCCAACACTCCGCAAAATTTAAAATCTTGTTTCAGAAAGTGTGGTTTGTTCCTCTTAAACCGAGATCCTGTATTGCAAAGAATGCCAAATCAGCAGCTGGAGGCTACTGTCCCAGTTCGTGAATTATTAGGGGAGAGCTTTCTGGAGAATTTAAGATCTACAAGAGTGCAAGTCACTGAAACAAGGACTTATCGAAGAAGGAGACGCGTAAACGTTCCACAGGGTAAAGGTATTACAGCTGCAGATTTAGTAGAGGAAGAAACATATATGGTTTTATTTATTAATAATGAAATACCTATGAAATCATGCAATCAATAA
- Protein Sequence
- MPRDYKRPIGCRSYKNYTEETFNFFLEEINSGKISTQAASEKYGIHKNTLSLKLKNKTPLKHGRQTVFSEEEELALISHITALSAFGFPITTLELRCIAKSYLERQGRKVPKFANNLPGKEWIYSFLKRHKSLLSNRVARNITHGRAEINEVVVNEFFDNYEKETENVPDTNIWNYDETCLVDDPGSVIVLTRRGTKYPETIKNSSKAATSIMLCGNAAGELAPVYVVYKAENMWGTWAENGPPQARYNRTKSGWFDARCFEDWFEYTMLPILKKQTGKKVLIGDNLSSHISPHVISLCEANNIAFIALPPNATHLLQPLDVAYFRPMKIAWRKILNEWKNNTRNSKSSSVPKDQFPMLLKQMFQEMEANTPQNLKSCFRKCGLFLLNRDPVLQRMPNQQLEATVPVRELLGESFLENLRSTRVQVTETRTYRRRRRVNVPQGKGITAADLVEEETYMVLFINNEIPMKSCNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01171408;
- 90% Identity
- iTF_00213383;
- 80% Identity
- -