Bhyb019494.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- -
- Assembly
- GCA_027564075.1
- Location
- JANSTU010020374.1:1-5044[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.32 5.7e+02 0.8 0.1 19 29 313 323 311 334 0.85 2 17 0.037 67 3.8 0.2 14 33 336 357 321 361 0.74 3 17 0.023 41 4.4 1.2 13 41 363 388 357 391 0.86 4 17 0.065 1.2e+02 3.0 3.5 7 38 386 417 384 418 0.72 5 17 0.00031 0.56 10.4 2.4 5 30 412 437 410 446 0.80 6 17 0.03 54 4.1 3.1 5 30 440 465 437 473 0.83 7 17 0.089 1.6e+02 2.5 4.0 17 38 479 501 468 503 0.82 8 17 0.0051 9.2 6.5 2.9 6 32 497 523 496 530 0.75 9 17 0.0082 15 5.9 2.5 6 33 521 552 519 559 0.72 10 17 0.0018 3.3 8.0 3.1 4 38 551 585 548 586 0.84 11 17 0.00066 1.2 9.4 0.8 5 38 580 613 578 620 0.84 12 17 0.013 23 5.2 7.0 13 38 615 641 608 642 0.77 13 17 0.0075 13 6.0 2.7 6 30 637 662 636 670 0.71 14 17 0.00029 0.51 10.5 2.7 18 38 676 697 672 697 0.96 15 17 0.0065 12 6.2 2.9 18 43 704 726 700 727 0.93 16 17 1.2 2.2e+03 -1.1 0.2 14 30 761 778 751 787 0.74 17 17 0.0046 8.2 6.7 1.2 18 44 793 816 781 816 0.92
Sequence Information
- Coding Sequence
- GATGGTGATGGTAACAGGGCTGTGGAAATCGTCACCTCGTCTGGTGACATGCGAGTGGATTCATCAACTATAGCAAGTGTAGCTCAGCTTGGTAAATACTGGGTACTGACGAATCTCTTTCAGGCGCCCGGTGTCTACAATGCACAGTCTAAACCTGAAAAAACAGACCAACAAAATTCAATGTCTAACGGAAACTCACAGCTTCTATTAGGCGCTCCCGAACGGGCTTCACTAAGTGCAGCCCATCCTGGTATGTCGATTCCGTTGTCGGTGATAGAATCTCAGCAGCATCTTATACAAAATATAAACGGTGGTCTCGGAATCCATGTTCCACCAGCTCATGTGCCGATGTTACACATGAGCAACGGTGATATTACTTCTAAAATACAGAAACTCTCACAAGACGTAGCCTATCAGAATCTTCGTGGTTTACATCAAACACTTCAGCAACAGCAACATCAAGCAAGTGAAGCGATTAAATTAGAACAACAACATCGGTATTCTCAGGAAGAGGCTCATAAGCTAGCCTCTATGCCACCGTTTTCCAATGACGGTAGACTAACGGGTGGTACGCAACAGATAATTGACGTTCGAAGTGCCGATGGACAGATTATACAGGTGAACATCGAGGATATCAGTCAGTTTCTCACCTACCATGAGGTATTCGGTAAACTCTCAACGGATACAAGTGCCAATACTTCTGAGACAACAACGTCAAGCACAGCACCGTCACTAACAACTACATTATCTGGCTCCAATCACCAGCACACAACAACTTCGTCTTCCTCTGGTCCGCAAACCAACTCAAACATGGTTACACCAAAATTAGAGCAAACGCCGTCAACTTCATCGGTTCCTACTTCATCGGATTCCCTGCCCATTGATGCAATGCATAATGTTGATTGCAATGGAACAGGATTGGCAGCAACGCATGCATGTGATATATGCGGCAAAATGTTTGTGTACAAATACCAGCTGATTGTTCATCGGCGTTACCACAGTGAACGTAAACCATTTGTGTGTCAGGTGTGCGGTCAAGCCTTTAGCAATACTTTAGAGTTAACAACACATGGTAAAACGCACGAAAACAACAGCATGCTAACGTGCAATGTTTGCTTTCATGTTTTTGCCAGTGACTctagtctagagcgacacatgaagcgtcattcgaccgataaaccatttgggtgcagcatctgccaaaagacattcgcacggaaggaacatttagagaatcattttcgtagccatacgggtgaaacaccgttccgttgtcaatattgtgccaaaacatttacacgcaaagaacatatgcaaaatcatgtacgaaaacataccggagacacgccacatcgttgtgatatatgtaaaaaatctttcacacgaaaggaacactacgtaaaccactatatgtggcatacaggtgaaacaccacatcaatgtactgtttgctttaaaaagtatacccgcaaagagcacctagccaatcacatgcgatcacacaccaatgacacaccattccgttgcgagatatgcggcaaatcgtttactcgaaaagaacactttacaaaccacattctatggcacactggtgagacaccacaccgttgtgatttttgttcaaaaacctttacacgcaaagaacacctgttaaatcatgtacgtcagcacacgaatgagtctccacatcgttgtgagttttgcatgaagtcgtttacgcgcaaagaacacttagtaaaccacgttcggcagcatactggcgagacaccttttaaatgtgagtactgtcctaaagcattcacacgtaaagatcatctggtcaatcatgtacgtcaacataccggagaatcaccgcacaagtgtacatactgcacaaaaacatttacgcgcaaggaacatctaacgaatcacgttcgaaaacacacaggtgattcaccgcacaaatgccaatactgtcaaaaggtgtttacccggcgcgagcacctaaacaaccacgtgatgatccatacgggtgtatcaccgcacaagtgtgaattttgtgcaaagacttttacgcgaaaagagcacctaactaatcatctgaaacatcattccggtgataatccacacgtttgtacagtatgcaacaaaccttttacacgaaaggaacacttgatcaatcatatgGCAAGGTGTCATATAGGTGATCGACCGTTTGCGTGCGAAGAGTGTGGCAAATCATTTCCACTGAAAGGCAATTTGTTGTTTCACCAACGTAGTCATAATAAAGGTGTCAAAGCTGAACGTAATTTTGTTTGTGACTTGTGTCCAAAAGATTTTATTTCAAAGGGTCACCTTGTTTCCCATCGACGTACCCACTCTGGTGATCGTCCATTTGTCTGTCTGACATGCGGCAAATCGTTTATGGGAAAAGCTAACTGGTTACGTCACATGAAACGAACTCATCCGGATATCGCAAATCCGCAATTCCGTAAGTTTTGA
- Protein Sequence
- DGDGNRAVEIVTSSGDMRVDSSTIASVAQLGKYWVLTNLFQAPGVYNAQSKPEKTDQQNSMSNGNSQLLLGAPERASLSAAHPGMSIPLSVIESQQHLIQNINGGLGIHVPPAHVPMLHMSNGDITSKIQKLSQDVAYQNLRGLHQTLQQQQHQASEAIKLEQQHRYSQEEAHKLASMPPFSNDGRLTGGTQQIIDVRSADGQIIQVNIEDISQFLTYHEVFGKLSTDTSANTSETTTSSTAPSLTTTLSGSNHQHTTTSSSSGPQTNSNMVTPKLEQTPSTSSVPTSSDSLPIDAMHNVDCNGTGLAATHACDICGKMFVYKYQLIVHRRYHSERKPFVCQVCGQAFSNTLELTTHGKTHENNSMLTCNVCFHVFASDSSLERHMKRHSTDKPFGCSICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMQNHVRKHTGDTPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCTVCFKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTNESPHRCEFCMKSFTRKEHLVNHVRQHTGETPFKCEYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRKHTGDSPHKCQYCQKVFTRREHLNNHVMIHTGVSPHKCEFCAKTFTRKEHLTNHLKHHSGDNPHVCTVCNKPFTRKEHLINHMARCHIGDRPFACEECGKSFPLKGNLLFHQRSHNKGVKAERNFVCDLCPKDFISKGHLVSHRRTHSGDRPFVCLTCGKSFMGKANWLRHMKRTHPDIANPQFRKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00211780; iTF_00210970;
- 90% Identity
- iTF_00211780;
- 80% Identity
- iTF_00211780;