Bhyb014670.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- lrrfip2
- Assembly
- GCA_027564075.1
- Location
- JANSTU010001799.1:2713-6247[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-108 1e-103 346.9 31.3 1 299 146 431 146 432 0.95 2 2 0.02 3.9e+02 0.2 2.3 230 254 463 487 439 506 0.54
Sequence Information
- Coding Sequence
- ATGGCTACGGCAAGTGAGATAAAAGACTGGAATCAAAATTCACATATAGCAGACAATATGAATTTATTGCAATCAAACGGCGGTACGGAAGATACGAAAAGTGATGAAGAAGAGGGCGATGAGGAATTTAATTTCAGTTCAAGTGATCTGGACGAGTTGAGCAGTAACAGTGATGAAGACAATGAAGCTTACAAAATTGAGCCTGATATACAAAATAACAATCAAACATCATGTAAACAGACTGAAGACCCGGTCTGTTCTACACATCTACTTAAGGATTCATTAGTCTCTGGTGGTCCGACCGGTGATAGCACAGTTTCCACAGACAACAAATTAAACGACACATTGGAAATTAGCAATGTTTCCTGCGAAGACGATCTGTTAAGTGATGAGGACAATGTGATTGTAAACTTTCTCGGAAAATCCAATGAAATAGCTGAGGCCAGACTCGCACAGCGACGTCAAGCTCGAGCTGAGGCACGCGAGATTCGGATGCGAGAGCTTGAACGACAACAAAAGGAACAAGAACAGAATGCTGACCGGGTGTTCGATATGCAATCTGCAGCAGGAATAGATCCAATTGCAAGATCTCGCCTTGTAATTTCCTCTACGGGTGTTCCAATTCGTGGTAATTCAATGTCTTCACGACGTAGCAGTGAGGATTCGTTGGAAGAGGAGGGGCGTAGTTTACGAGACATACGTCATGAACTTAAGGATGTAGAGGAACGATTTCGAAAAGCAATGATAGCGAATGCTCAGTTGGACAATGAACGTTCATCACAGTCTTATCAAATACAATTGCTTAAGGACAAATTGGAGGAGATGGAAGAGGCCCATGCTCAGCTCCAACGAGAGCATAAGGATAAGTGCCGTGACCATGATGCTATAAAACGTTGTAATGATAAATTCATCGAAGAACTGAAACTCGTGCAAGGCCAACTCACTGAAAGAGACACTCTAATAAAGGAGCAAGGATTGACGATAGTAATTGTTGAAAACTCGGAAGGAACAGATGCCAGGCGAGCTCTAGTCAGTGTTGAACACGTACAATTACTTGACTCAGTTCAAGGTTCTTTAGATGTTAGACTACGAAAGTTTTCCGAAGAAAAACAAGCATTATTAGCTGAAATACAACAATTGCACCAACAATTATTGGATTCGAAATCACAGAGAAAGACGGGCTCTCAAAATGGTCCATTAGGCGACGAAGACTATGAAGATGTTCAAAGAGAAGCAAACAAATTGATTATGGACTACAAATACAGACTGCAAAAGGCTGAACAAGAAATTGCCAGTTTACAGGCAAGTTTGGCGCGTTCAGAAACACAAGTGATCAGATACAAAAACACAACCGATGCTGCCGAAAAAGCCGAGTGCGACCTGAAAACAGAACGTCGAAAACTACAGAGAGAAAATCGAGATATTTCGGAAAAACTAGAAGAGCTGGAGACTGCCAATAATCATCTAGTAAAACGTTTGGACAAACTAAAGAACGCTAAGAGTGCCCTGCTGAAAGATCTCTGA
- Protein Sequence
- MATASEIKDWNQNSHIADNMNLLQSNGGTEDTKSDEEEGDEEFNFSSSDLDELSSNSDEDNEAYKIEPDIQNNNQTSCKQTEDPVCSTHLLKDSLVSGGPTGDSTVSTDNKLNDTLEISNVSCEDDLLSDEDNVIVNFLGKSNEIAEARLAQRRQARAEAREIRMRELERQQKEQEQNADRVFDMQSAAGIDPIARSRLVISSTGVPIRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERSSQSYQIQLLKDKLEEMEEAHAQLQREHKDKCRDHDAIKRCNDKFIEELKLVQGQLTERDTLIKEQGLTIVIVENSEGTDARRALVSVEHVQLLDSVQGSLDVRLRKFSEEKQALLAEIQQLHQQLLDSKSQRKTGSQNGPLGDEDYEDVQREANKLIMDYKYRLQKAEQEIASLQASLARSETQVIRYKNTTDAAEKAECDLKTERRKLQRENRDISEKLEELETANNHLVKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00210803;
- 90% Identity
- -
- 80% Identity
- -