Bcin010753.1
Basic Information
- Insect
- Bolitophila cinerea
- Gene Symbol
- lrrfip2
- Assembly
- GCA_010015015.1
- Location
- JAAAKO010007556.1:17447749-17451812[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-109 9.2e-105 350.6 32.7 1 299 147 432 147 433 0.94 2 2 0.022 5.2e+02 0.1 2.3 7 35 465 495 444 507 0.56
Sequence Information
- Coding Sequence
- ATGGACAAGTCACAGATTAAAAGTGGTGGCACGGATAGTGAGAAAATAGACTGCAATGAGAATTCGGACGTAACAGACAATATGAATGTGTCAATGAACAGTGGCAGTGTTGCTTTGGATTTAAAGTGTGCTAGTGAAGATGAAGCCGGAGacgaagaatttaattttagttcaaGTGACTTGGAAGACTTGATTGGCAGCgacagtgatgaagaaaatccaTGTAAGAGCATTGTGGCTGATTTGAAAAGCGATCAAACGGTCACATTGGACAGTAAGGACTTTCAATTACCCGAAGATGCAGCAGCTGATAGCACATTTTCTACAACAAATCCATTGAACGGAACCTTTGAGACAAGTATAGTTTCTTGCGAAGATGATTTGTTAACCGATGAGGACAATGTGATTGTAAACTTTCTCGGGAAATCCAACGAAATAGCTGAGGCAAGACTTGCTCAGCGACGCCAAGCTCGTGCTGAGGCGCGCGAGATTCGGATGCGTGAGCTGGAACGACAACAAAAAGAACAGGAACAAAATGCTGACCGAGTATTTGATATGCAATCAGCAGCTGGCATAGACCCAATAGCAAGATCTCGCCTAGCCATTTCGTCAACGGGTATACCGATTCGCGGCAATTCAATGTCTTCCCGACGTAGCAGTGAGGACTCACTGGAGGAGGAAGGACGTAGCTTGCGTGACATACGTCATGAACTTAAggaTGTTGAAGAGAGATTTCGAAAGGCAATGATAGCGAATGCCCAGCTTGATAATGAACGTTCATCACAGTCTTATCAAATTCAACTACTTAAAGATAAATTAGAGGAGATGGAAGAGGCTCACGCTCAGCTGCAGCGCGAGCATAAGGACAAGTGTCGTGATCATGATGCTATCAAGCGCAATAACGATAAATTAGCTGAAGAACTGAAACTTGTACAAGGACAACTAATGGAAAGGGACACTCTGATCAAGGAGCAGGGATTGACGATAGTAATAGTAGAAAACTCGGAAGGAACAGATGCCAAGCGAGCTCTAGTCAGTGTTGAACACGTACAATTACTCGATTCTGTTCAAGGATCTCTAGACGTTAGACTACGAAAGTTTGCAGAAGAAAAGAATAGTTTACTAGCTGAAGTGCAGCAGTTACATCAACAGCTGGTTGATTCAAAGTCGCAGCGAAAATCTGGCTCTCAAAATGGTCCTTTAGGAGACGAAGATTTTGAAGATGTCCAACgaGAAGCCAACAAATTGATTATGGACTACAAATACAGACTCCAAAAGGCCGATCAAGAAATCGCTAGTCTTCAGGCTAGCTTAGCCCGTTCGGAAACCCAAGTAATCAGATACAAAAGTACAACTGATGCTGCTGAAAAAGCCGAGTGCGACTTGAAAACGGAACGACGAAAACTACAGAGAGAGaATCGAGATATTTCTGAGAGACTGGAGGAGCTGGAAACTGCCAACAATCATCTTATAAAACGTCTGGACAAGCTTAAAAACGCTAAGAGTGCTCTTCTGAAGGATCTCTGA
- Protein Sequence
- MDKSQIKSGGTDSEKIDCNENSDVTDNMNVSMNSGSVALDLKCASEDEAGDEEFNFSSSDLEDLIGSDSDEENPCKSIVADLKSDQTVTLDSKDFQLPEDAAADSTFSTTNPLNGTFETSIVSCEDDLLTDEDNVIVNFLGKSNEIAEARLAQRRQARAEAREIRMRELERQQKEQEQNADRVFDMQSAAGIDPIARSRLAISSTGIPIRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERSSQSYQIQLLKDKLEEMEEAHAQLQREHKDKCRDHDAIKRNNDKLAEELKLVQGQLMERDTLIKEQGLTIVIVENSEGTDAKRALVSVEHVQLLDSVQGSLDVRLRKFAEEKNSLLAEVQQLHQQLVDSKSQRKSGSQNGPLGDEDFEDVQREANKLIMDYKYRLQKADQEIASLQASLARSETQVIRYKSTTDAAEKAECDLKTERRKLQRENRDISERLEELETANNHLIKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00211625;
- 90% Identity
- -
- 80% Identity
- -