Basic Information

Insect: Blattella germanica
Gene Symbol: -
Assembly: GCA_003018175.1
Location: PYGN01002481.1:1-26961[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0052 24 5.7 0.1 21 46 378 402 373 406 0.82

2 9 0.23 1.1e+03 0.5 0.0 26 44 438 456 433 461 0.82

3 9 0.048 2.3e+02 2.7 0.0 18 44 583 609 574 613 0.76

4 9 0.063 3e+02 2.3 0.0 19 44 764 789 762 796 0.74

5 9 0.48 2.3e+03 -0.6 0.1 23 46 797 820 792 826 0.81

6 9 0.019 90 3.9 0.1 17 44 1032 1059 1025 1064 0.79

7 9 0.029 1.3e+02 3.4 0.6 23 46 1066 1089 1062 1094 0.88

8 9 0.00064 3 8.7 0.2 23 47 1183 1207 1171 1213 0.87

9 9 0.0068 32 5.4 0.0 19 43 1487 1510 1482 1515 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0052	24	5.7	0.1	21	46	378	402	373	406	0.82
2	9	0.23	1.1e+03	0.5	0.0	26	44	438	456	433	461	0.82
3	9	0.048	2.3e+02	2.7	0.0	18	44	583	609	574	613	0.76
4	9	0.063	3e+02	2.3	0.0	19	44	764	789	762	796	0.74
5	9	0.48	2.3e+03	-0.6	0.1	23	46	797	820	792	826	0.81
6	9	0.019	90	3.9	0.1	17	44	1032	1059	1025	1064	0.79
7	9	0.029	1.3e+02	3.4	0.6	23	46	1066	1089	1062	1094	0.88
8	9	0.00064	3	8.7	0.2	23	47	1183	1207	1171	1213	0.87
9	9	0.0068	32	5.4	0.0	19	43	1487	1510	1482	1515	0.76

Sequence Information

Coding Sequence: ATGAACATACGCAGTACTGGAGACTATTGTGAAAATGTTTTTGAATCCAAAGTGCCTGGAGGAAGAGTCAAAGACTTCAAACACTACAATGCAGAGGATTGTACAGACACACAAATGGTACTAATAATGGATCCTTCACAAAGTGAAGATCAGCTCTTTGATAGAAGCAATGATGATGAGGATCCTCTAGCGGATCCTTTAGCACTTCCTGAAATAAAGGCAGAACCTCTGGGAATAATGCCTGTTGTTAAGCAAGAAATTGACAATGTCGAACCTCCTAATCAATCACTGAATACAGATGAGTATAGTAACTCTCAGCAAGATATGCAACATGAATCTAATTTTGTTGAAGTACACATGCCTGCTGTTAAGCAAGAAATTGACAATGTAGAACCAGCTAACCAAGTAGGAAATGCACATGAGTTGAGTAACTCTCAGCAAGATATGCAACATGCATCTAATTTTCTTGAAGTACACATGCCTGCTGTTAAGCTAGAAATTGACAATGTAGAACCAGCTAACCAAGTAGGAAATGCACATGAGTTCAGTAACTCTCAGCAAGATATGCAACATGGatctaattttattACATGCAGTGATAGTAATACCAGTAATACTTACGAAGAGAATTTGGATGTTGATGGTCAGGTGAGCAATagagttttatataatataactGAAAGTAATCCAGCAAAAAACAATGTTCATACAAGTTGGCAGGATATTCAAGAGAAAACTGATATAATTAATAAAGGTTTGTCTGTGTCTAATAATCAGACTtcagaatttgaaaatttatcaaCAGTTAATAAAACGTCAGTAAACCCTGTCGTGGATACTGCAAGAACAGAACCATTGTTAATTAAGGAAGAACATGATAATAGAAGTTACTCCAAAGAATTAACATCTAGCCAAATTGTACATCAAACCAATACACCAACAACTGATTTGTTTGTGGTAACAAAGAATGAATTGTCTTTAGAAGAAACAGCTGTGAATTCTGATATTAGGTGGTCTAATAATAGGGAAACACATTCCGATCTTGACAAATCATACATTTGTATTATATGTAGTGAAAAGTTTTCTAAATGTAAACAACTAAATGCACATATTATAACACACACATCAGAAAGTGAACCACTCTATTGCCCGGTATGTTATAAAGCTTTCTCTAAGAAGAATTGTCTTTTGAATCATCTCTGTTTACACACAGGATTTTGGCCATTATATTGTTACTGGTGTGGAAAAGGATTTATTAGAAAAAGTGGTCTTAGAATACATCTTCATGAACATGAAGAAATATATCAAAAAACTTGCCCAGTCTGTAAAACATCTTTTATGAATGGTCGTGAGTTTGAAGATCACATTTTAAATAGTCATGGATTTGAAGATAGTGAATTAACATCAGAAACAACAAGAATTGCAAGTAGCAATAGCAATCCAGGGTTTGGAGAATCATcatttcagaatgaaatgatgCCTGATGCGAATGGCTTATTGAAAGGAACAGAGAATGGAAGATATACCGGTACTCCAAGTGAAAAAAATCCAATTCTTCGAGCTGCTATTACAGGGGAGATCCAGAAAGAGACAAGTAAAAGAAAACGTCAAGAAGGTAGTATATCTACCATGGAGAATAATGAAAATAGACAAATGCAAATAGATACCACTAGAACTAATAATTTCTGTACTATTTGCAGTGAGAATTTCAACAATACTCATGACCTTAATACACATTTACTCAGTCATTCTTCCCAGTTTGCTCCATTTGCATGTCCTAtttgtaaaaagttatataaTCGGAAATATTATCTTTTCAAACATCTTTGTTGGCATACTGGGCATCTTTACTATTCTTGTACTGAATGTGGGAAAGGACTACCTTTAGAAGCAAAGAAGCGTAAAATTGCACAAGATCGtgcaaaagaaagaaaggaagaaaataagaaacctaaaaatatacaaaatcgtagtaatttttgtaaaatatgtaaggAAACTTTTACATCACAATATTATTACAAATCTCACATGTTGAATAATCATACAGGTATGATACCATCAGCAATGTTAACAGTTCCTCAAATTCAACAACAGCATGTGTCTCCGGAATCTCTAGCATTGCCGCAAGAAAGATCCATCTCGTTAGTACCATTTGCAGGTGGAATTCCTAGACCtacaaaagaaaatgaagatCTTTTATCACCTCTTTTGACAGGAAAGCAACAATTGCATATTCCCAATCCTTTTGTAATACAATCACTAGATGCAAGTTCATTAGGGATAAATTCTCAGCAGCAAATTGGTTTCCTCTGTCCTATCTGTAAAGTTATATTTACAGAACGAAATGATCTTAATGGACATTTGCTTACACACACATCTGCAGTCAGCCCATTCGTGTGccctctttgtcaaattttatttGCTGATATTCCTAAACTTGAAAATCATCTGCTCTTACATTCTGGAATTCATCCTCTTGGTTGTCATATATGTGGCCAGTCATTTCCCAATTCTTTTTCACTTCTTGAGCACCATCGCGAACATGCAGGTATACATGTGTATGCCTGTCATTTATGCAGTATGAAATTTTCACAAAATCAGCAGCTATTAGAACATATTGCTGCACACAAAATGCAAAATTCAGGGCTACAAGGAAATGATGTTGGCGTGCCTCCAATATCAAACTATGAAATATATCAAATTCCAGAAAGCACGGATCTAAATATCCAGATAATGAACTGTGAAAGCTTAAATACTTCCTCAAATACCGAAAATATTCCAAAAGATGCTTGTTCTGAGGTCCCTTCAGAATCAACTTTTGATGAACCTGCTTCAGAAGAGCcaacttataaaatacaaataatggaTTGTGAAAGTTTAAGTACTTCAGTGGATTCAACTAATGTTTCGATAGATACTGATCCACATGAAAAGGCAGAAGAATCAGATGAAGAAACAAATATTGGTTTATTGGAAGAGGAACAAATATTATGTTAcacattaatttttaaagaagatTCTCCCCAGTTTTCTTGTAATATCTGTAATGAGACATTTGCAAGTAGAAAGGaacttacaaaaaatataatttctcattCATTTAATGAGAATCCATTTCATTGCCCTGTTTGTAATAAAGGGCTTAGTTCAGAAACCcgtttaaaactgcatatttgtCTGCATACAGAATATCAGCCATATATTTGTCATATTTGTCAGACTGCTTTTGCCCAGAAAAAGGCTCTTAAATGTCATTATGATAACATTCACCAGCACACTAATTCTTGTGAATTATGTAATACATCCTGGTCTAATGAAGTGTTAGACTGTGAAGAACTGCCTCAAGCTGCTGACAGAGAATCTGTTGATCCTGCTGTGAAAGAAGGTACTCAGGTATTGTCTGTTAAGCCAACATATGAGCCTTGTTTCTCAGAATTTGTAAATGATGGTGTTAAATGCTATTCATGTAATTTTTGTAACGACAGTTTTACAGAGTTGAAGGATGTTACTAAACATCTGGGGATGCAACATACAAGCAAATCTAGCCCATTTGCTTGCCCAAGTTGTAATAAGACAATCAAATCAAAGTTCAATTTATTTAGGCATCTTTGCTTACATACAGGTTACAGACCATTTTCCTGTTATATTTGCAATAAACCATTCATTGGAAGGCCGTCATATGTTAATCATCTTCATATGCATGCACAAGAAGCTGCAAAGTCACAACAGAATGGTGCTAATTCAAATACTTCAAAAGATGTACAAAACAATGAAATGGATGAATCTTCAAATAATCAAACAAGTAATGATATCCATGAAAGTAATACAAGTGAATCTAACACCCAATCCATACCAATGAAAGAAACAGTGCCAGAAAATCAAATGGAGAAAAATCAAAGTGAAtcagaaaataatagtaatacatcTGCAGTGACTGTAACCTCTAAAAATAGTGAGGAACAAGCCACACCCATTGTATTAGATGATGACTCAACTGATGATCCAATATTAATTTCATCAACTTCTTCATTTACAAGTATGACTAGGTGTAATAATAAATCTGCAGGAAATACAAATAGAGCTCGACATGTGCATATATGCAAAAGGTATTCTTGTAGAATTTGCAAGAAATCATTTGCATACGAGAGTACATTTAAAATGCATATGCGTGAAAAGCATGGAATGGAGAGTGAAATTGAAAGAGATCCTATAGCAATTGATGAGGCCATGCCTTCAAATTCTTGCCAacccagaatgcaaatggtcagGTATCGCAAGATTACGTCTTCAGTTTCAACTGGTGATGGGGATATTTTCATGATGGGAAAGAAGGAATGGAAGACTTGTTTCACCGAAATTGTTACAATAGATACAAATACACGTTCATATTCCTGTAATTACTGTAATGAGATTTTACCAAGGAAACTCCGTGTATCACACTTATCTACACATTCTTCTCAGTCTAAACCATTTCCATGTCCTGTTTGTTATGAAACATTTCAGTCTAAATTTACTCTTGACAAACACATTTTTGAGCACACAAATATTAATCCATATGAATGTCACACATGTGGGAAGTTTTTTAAGAAAACTGAATTCAAGGGACATCTTTGTGATGAAGTTGAACGTCAGTTTGTTTGTAGAAAATGTAAGCAAAGTTTTAGTACAGAGACTCCTTTAAGGAAACATACATATTTTCTGCACATAAAGAATGACCCTGAAGGTTTGGCAAAATCAGAAAGTGGTGTTTCTAAAGTTTTGAATGAGAATTCTTCACGTAAGGAAAACTCAAAACCAGAAACTAATATTCAGGATACAGTTTCAAATGTTGAAACAACAGAAGTGTCAGTAACAGCCCTGTTGCAGGAACCAAATTTACATTCCGATGAAGAGTTGAATATTTCACAAGAAAAAGCAATAGATGGTGAGGAGACATTCTCAGATAAAATTGAAGCTCTTCAAACAACACCGTTGAAGGACTTGGATCCACTATCTGATGAAATTCCAGAAAATGATGCACAAGATGGAAATTCAGTTGAGAATAAGATC
Protein Sequence: MNIRSTGDYCENVFESKVPGGRVKDFKHYNAEDCTDTQMVLIMDPSQSEDQLFDRSNDDEDPLADPLALPEIKAEPLGIMPVVKQEIDNVEPPNQSLNTDEYSNSQQDMQHESNFVEVHMPAVKQEIDNVEPANQVGNAHELSNSQQDMQHASNFLEVHMPAVKLEIDNVEPANQVGNAHEFSNSQQDMQHGSNFITCSDSNTSNTYEENLDVDGQVSNRVLYNITESNPAKNNVHTSWQDIQEKTDIINKGLSVSNNQTSEFENLSTVNKTSVNPVVDTARTEPLLIKEEHDNRSYSKELTSSQIVHQTNTPTTDLFVVTKNELSLEETAVNSDIRWSNNRETHSDLDKSYICIICSEKFSKCKQLNAHIITHTSESEPLYCPVCYKAFSKKNCLLNHLCLHTGFWPLYCYWCGKGFIRKSGLRIHLHEHEEIYQKTCPVCKTSFMNGREFEDHILNSHGFEDSELTSETTRIASSNSNPGFGESSFQNEMMPDANGLLKGTENGRYTGTPSEKNPILRAAITGEIQKETSKRKRQEGSISTMENNENRQMQIDTTRTNNFCTICSENFNNTHDLNTHLLSHSSQFAPFACPICKKLYNRKYYLFKHLCWHTGHLYYSCTECGKGLPLEAKKRKIAQDRAKERKEENKKPKNIQNRSNFCKICKETFTSQYYYKSHMLNNHTGMIPSAMLTVPQIQQQHVSPESLALPQERSISLVPFAGGIPRPTKENEDLLSPLLTGKQQLHIPNPFVIQSLDASSLGINSQQQIGFLCPICKVIFTERNDLNGHLLTHTSAVSPFVCPLCQILFADIPKLENHLLLHSGIHPLGCHICGQSFPNSFSLLEHHREHAGIHVYACHLCSMKFSQNQQLLEHIAAHKMQNSGLQGNDVGVPPISNYEIYQIPESTDLNIQIMNCESLNTSSNTENIPKDACSEVPSESTFDEPASEEPTYKIQIMDCESLSTSVDSTNVSIDTDPHEKAEESDEETNIGLLEEEQILCYTLIFKEDSPQFSCNICNETFASRKELTKNIISHSFNENPFHCPVCNKGLSSETRLKLHICLHTEYQPYICHICQTAFAQKKALKCHYDNIHQHTNSCELCNTSWSNEVLDCEELPQAADRESVDPAVKEGTQVLSVKPTYEPCFSEFVNDGVKCYSCNFCNDSFTELKDVTKHLGMQHTSKSSPFACPSCNKTIKSKFNLFRHLCLHTGYRPFSCYICNKPFIGRPSYVNHLHMHAQEAAKSQQNGANSNTSKDVQNNEMDESSNNQTSNDIHESNTSESNTQSIPMKETVPENQMEKNQSESENNSNTSAVTVTSKNSEEQATPIVLDDDSTDDPILISSTSSFTSMTRCNNKSAGNTNRARHVHICKRYSCRICKKSFAYESTFKMHMREKHGMESEIERDPIAIDEAMPSNSCQPRMQMVRYRKITSSVSTGDGDIFMMGKKEWKTCFTEIVTIDTNTRSYSCNYCNEILPRKLRVSHLSTHSSQSKPFPCPVCYETFQSKFTLDKHIFEHTNINPYECHTCGKFFKKTEFKGHLCDEVERQFVCRKCKQSFSTETPLRKHTYFLHIKNDPEGLAKSESGVSKVLNENSSRKENSKPETNIQDTVSNVETTEVSVTALLQEPNLHSDEELNISQEKAIDGEETFSDKIEALQTTPLKDLDPLSDEIPENDAQDGNSVENKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00210126;
90% Identity: iTF_00210126;
80% Identity: iTF_00210126;