Basic Information

Insect: Blattella germanica
Gene Symbol: -
Assembly: GCA_003018175.1
Location: PYGN01002258.1:92824-143514[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00029 0.017 16.2 1.4 1 23 564 586 564 586 0.96

2 18 0.054 3.1 9.1 3.2 1 20 592 611 592 614 0.92

3 18 2.3e-05 0.0013 19.7 0.7 1 23 620 642 620 642 0.99

4 18 0.0007 0.041 15.0 3.6 3 21 650 668 648 670 0.94

5 18 5.6e-05 0.0032 18.4 4.6 1 23 676 698 676 698 0.99

6 18 5.6e-05 0.0032 18.4 5.3 1 23 704 726 704 726 0.97

7 18 2.7e-06 0.00016 22.6 3.9 1 23 732 754 732 754 0.96

8 18 2.1e-07 1.2e-05 26.1 2.7 1 23 760 782 760 782 0.98

9 18 0.00015 0.0088 17.1 6.7 1 23 788 810 788 810 0.97

10 18 9e-05 0.0052 17.8 5.8 1 23 816 838 816 838 0.97

11 18 1.3e-06 7.3e-05 23.6 2.9 1 23 844 866 844 866 0.98

12 18 1.9e-05 0.0011 19.9 7.8 1 23 872 894 872 894 0.98

13 18 5.9e-05 0.0034 18.4 9.1 1 23 900 922 900 922 0.98

14 18 1.9e-05 0.0011 19.9 7.7 1 23 928 950 928 950 0.98

15 18 0.0022 0.13 13.4 8.8 1 21 956 976 956 978 0.94

16 18 0.00025 0.014 16.4 0.4 1 23 984 1006 984 1006 0.98

17 18 0.068 3.9 8.7 4.5 1 23 1016 1038 1016 1038 0.98

18 18 1.5e-06 8.5e-05 23.4 0.9 1 23 1044 1066 1044 1066 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00029	0.017	16.2	1.4	1	23	564	586	564	586	0.96
2	18	0.054	3.1	9.1	3.2	1	20	592	611	592	614	0.92
3	18	2.3e-05	0.0013	19.7	0.7	1	23	620	642	620	642	0.99
4	18	0.0007	0.041	15.0	3.6	3	21	650	668	648	670	0.94
5	18	5.6e-05	0.0032	18.4	4.6	1	23	676	698	676	698	0.99
6	18	5.6e-05	0.0032	18.4	5.3	1	23	704	726	704	726	0.97
7	18	2.7e-06	0.00016	22.6	3.9	1	23	732	754	732	754	0.96
8	18	2.1e-07	1.2e-05	26.1	2.7	1	23	760	782	760	782	0.98
9	18	0.00015	0.0088	17.1	6.7	1	23	788	810	788	810	0.97
10	18	9e-05	0.0052	17.8	5.8	1	23	816	838	816	838	0.97
11	18	1.3e-06	7.3e-05	23.6	2.9	1	23	844	866	844	866	0.98
12	18	1.9e-05	0.0011	19.9	7.8	1	23	872	894	872	894	0.98
13	18	5.9e-05	0.0034	18.4	9.1	1	23	900	922	900	922	0.98
14	18	1.9e-05	0.0011	19.9	7.7	1	23	928	950	928	950	0.98
15	18	0.0022	0.13	13.4	8.8	1	21	956	976	956	978	0.94
16	18	0.00025	0.014	16.4	0.4	1	23	984	1006	984	1006	0.98
17	18	0.068	3.9	8.7	4.5	1	23	1016	1038	1016	1038	0.98
18	18	1.5e-06	8.5e-05	23.4	0.9	1	23	1044	1066	1044	1066	0.96

Sequence Information

Coding Sequence: ATGATGAATGCCGAGCAACACACCTTGACTGTCCCCACTTCATCAGCAGCGCCTCCGGAGGAAACATCTCATCCTGGTGCACTCCAAAGACATACCGGAACACCTACTGATTTGCGTGTAGGTACAGCAGCTGTTGCATTGTCTAGTGTGGCCAAATACTGGGTTTTGACAAATCTTTTCCCAGGACCTATCCCTCAGGTGTCTGTATATGGGATACATCATCCTCGACCATGCGACAATGGAAAGCCTGGAGGTGGGCAGGAAGGCCTACcccagcagcaacaacaacaacattgttTGACAGGGCCCCCAGGTTTAGGTGTGACAACAGAAACCATGGCTCTTGTTCCACACCATCCTCAGCACACACATCCACAGCAAATCCCCGTAACAGCTGTTCAAGCAGCCCTGACAACAACTGCAGGGGGCGTAGCTACTCTTTCACTTCCTCATCATCCAGCAGCGTCCCAGCAACAACATATAGAAGTTTCAGGAGCTGGAGCTACGACTGTTGTATTAACAGGGGAAGAGGTAGATAAAGATAAATTGGACAAAGGGACCTGTACAACAGAACGATGTGGCGAAAACCAAGTTCATTGTCAGAGGCATGATGTGGTTGTTGTGAGCCTCCACCTGGAAAATTGCCATGTGACCTCCCAGGTGCAGTGTGACCTTCAGTTGGTGAATGCTGCCGCAGTTGCAGCACAAACACAACACCAAGCTAATGAACAGTTAGCTGcgcaacagcagcaacaacaacagcagcagcaacagcaacagcagcagcagcaacaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcaacaacagcagcagcagcaacaacaacaacagcagcagcagcaacagcaaaatttggcttcacaaatGTCTCAGCAGCTGCAGCATCAGCAGCAGTTGAATCAGCAGGCAGCGGTTGCAGCAGTACACCAAGCTATgtctcaacaacaacaacaacaacaacaacagcagcaacaacagcaacaacaacaacagcagcagcagccaCCACCACCTCCTCCACCTCCGCCACCACCTGCTCCACCACAGACTCAACAGCAACCTGGACAGTCTGGGCCTACGGGAGATGGTAGAGGTGGTAGTAATCCTGGACCCAATAATGGCATGCAACAGCCAGGTCCACCACCACAGCCTCCTCCTTCATCCTCACAAGAAGTTGGAACACAAATGGATCCTGTAATTGGATCTGATCAAGTGAAAGATGAAAAACCCGTGGCTAGTGGTTGTGCAAAGGACATTCGTAACATTCCAATGCCTGGATTTCCTGTACAGGATATTAAGGGTCATATGATGGACATCCGAACTGCAGATGGAAGTATTGTTAAAATTAGCACTCCAGGCAATGGTGATCAAGAACTCACTAAGACCTTAGGTGTGGAAATGGTGCAAAATATGTATAAGGTAAATGTGGAAGACATTAATCAGCTTCTTGCATACCATGAAGTCTTTGGAAAGCTGCAGAATGAAATGGCAGTTGCTGCTGGAACAGCAACCGCTGGTGCCACCCTTCAGAATCCAGGCGTAAAAACAACATGTAATGAGGTGCCTGGAGCTGGAACGAGTAACACTGCTACAGCGAGTACTGCTACTTCTCCAGGAGCTGCTGCTGTTATTACTGCACCAGGAACACACATCTGCGACATCTGCAGCAAGATTTTCCCTTTTCGCTATCAACTAATCGTTCACAGACGCTACCACACTGAACGCAAACCATTTACATGCCAGGTGTGTGGTAAAGCATTCACATGTGCAGCAGAACTAAGTCGTCATGGGAAATGCCATCTAGGTGGGAGCATGTATACATGTGCTGTATGTTTCCATGTATTTGCAAATGCTGCAAGTTTGGAACGGCACATGAAGCGGCATACAACAGACAAACCATATGGATGCACAGTATGTGGAAAGTCATTTGCAAGAAAAGAACATCTTGATAACCATACCCGTTGCCACACTGGTGAAACACCATATCGCTGTCAGTACTGTGCCAAAACATTCACCCGTAAAGAGCACATGGTGAACCATGTAcgtaagcacactggtgaaactCCTCATCGATGCGATATTTGCAAGAAATCATTCACTCGAAAAGAACATTTCATGAACCATGTTATGTGGCACACGGGGGAGACACCTCATGCTTGTCAGGTATGTgggaagaaatatacaagaaaagAACATCTAGCAAATCATATGAGGTCACACACAAATGATACACCCTTCCGCTGCGAGATTTGTGGAAAGAGTTTTACTCGGAAGGAGCATTTCACAAATCATATAATGTGGCACACTGGGGAGACACCTCATCGTTGTGATTTTTGTTCCAAGACGTTTACCCGTAAGGAACATCTTCTTAACCACGTGCGTCAGCATACAGGGGAGTCGCCTCATCGGTGTGGATTTTGTTCCAAGAGTTTTACTCGCAAAGAACATCTTATTAATCATGTGCGGCAACATACGGGCGAGACTCCGTTTCGTTGTCAATATTGCCCGAAGGCATTTACTCGTAAAGACCATTTAGTGAACCATGTACGACAACATACAGGTGAATCGCCGCATAAGTGCCAGTACTGCACTAAATCGTTCACGCGCAAAGAACATCTGACTAACCATGTTCGACAACATACCGGTGAATCACCTCATAGATGCCATTTCTGTTCAAAATCTTTCACACGCAAGGAACATCTGACCAATCATGTGCGTATTCATACAGGTGAGTCGCCCCACCGCTGTGAATTCTGTAACAAAACCTTTACTCGCAAGGAGCATTTGACCAACCATCTTCGTCAGCACACCGGAGAGACTCCACATTGTTGCAACGTATGCTCTAAACCATTTACCCGCAAAGAACACCTTATTAATCATATGCGATGTCATACAGGCGAGCGCCCTTTTAGCTGTTCAGAATGCGGAAAAGCATTTCCTTTGAAAGGGAATTTGCTTTTCCATCAGCGTTCGCATAATAAAGGAGCTGCAGCCGAAAGACCGTTTCGTTGTGACCTGTGTCCAAAGGACTTCATGTGTAAGGGGCATCTTGTCTCTCACAGGCGCTCACATTCGGGCGATCGACCACATGCTTGTCCAGATTGCGGCAAAACCTTTGTTGAGAAGGGGAACATGTTGCGTCATCTTCGCAAGCATGCTGGAGAAGGTGGTGGAGGTGGCAGTGCTGGTGCAGGAGCAGCCCAACCTCAGCCTCCTCAAGGACATCACCAGAATCCTGCGGTAGCAACGGCGGCCACGCATGGAGTTGTGGTTCCTACCACGCATCATCTCCAGCATCATCCTCCACCGCCGCCACCCTTGCAACCTCACCCTACACATACGGCTGTGGTTGTTCCCACTCCCAATGGTGTTTTGGCCACGTATTAA
Protein Sequence: MMNAEQHTLTVPTSSAAPPEETSHPGALQRHTGTPTDLRVGTAAVALSSVAKYWVLTNLFPGPIPQVSVYGIHHPRPCDNGKPGGGQEGLPQQQQQQHCLTGPPGLGVTTETMALVPHHPQHTHPQQIPVTAVQAALTTTAGGVATLSLPHHPAASQQQHIEVSGAGATTVVLTGEEVDKDKLDKGTCTTERCGENQVHCQRHDVVVVSLHLENCHVTSQVQCDLQLVNAAAVAAQTQHQANEQLAAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNLASQMSQQLQHQQQLNQQAAVAAVHQAMSQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPAPPQTQQQPGQSGPTGDGRGGSNPGPNNGMQQPGPPPQPPPSSSQEVGTQMDPVIGSDQVKDEKPVASGCAKDIRNIPMPGFPVQDIKGHMMDIRTADGSIVKISTPGNGDQELTKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQNEMAVAAGTATAGATLQNPGVKTTCNEVPGAGTSNTATASTATSPGAAAVITAPGTHICDICSKIFPFRYQLIVHRRYHTERKPFTCQVCGKAFTCAAELSRHGKCHLGGSMYTCAVCFHVFANAASLERHMKRHTTDKPYGCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHACQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLINHVRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCNKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRCHTGERPFSCSECGKAFPLKGNLLFHQRSHNKGAAAERPFRCDLCPKDFMCKGHLVSHRRSHSGDRPHACPDCGKTFVEKGNMLRHLRKHAGEGGGGGSAGAGAAQPQPPQGHHQNPAVATAATHGVVVPTTHHLQHHPPPPPPLQPHPTHTAVVVPTPNGVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01289132; iTF_01567172; iTF_00396505;
90% Identity: -
80% Identity: -