Basic Information

Gene Symbol
-
Assembly
GCA_905147135.1
Location
LR990061.1:6968663-6971002[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2.7e-08 4e-05 24.7 0.2 1 44 254 299 254 301 0.94
2 4 4.7e-11 7e-08 33.5 0.4 2 44 308 354 307 356 0.95
3 4 3.8e-10 5.8e-07 30.6 0.0 1 43 360 402 360 404 0.97
4 4 7.5e-06 0.011 16.8 0.0 4 44 416 458 415 459 0.92

Sequence Information

Coding Sequence
ATGGATTTAGATTCGGATAGCGATTATGAAACGCAAATGCGTGAAGTAGATCAACTGAATGCCGTGTTACAAGCAGATGAACAACCAAATGAAATTGCGTCTGAATATTCTTCTACTATAAGTACATTCAGCTTGTCCTCAAAGAATCAAGAAGAATACGCTAAGATAGAGCATGCATTggctttaaataaattaatagacgACAAACTACGACAACTTGAAGGAATACTTTATAATCGACTGCATGAATGTCGCGAGAGACTGAAAAAAATACAAGACTCTCCAACGACACCCGATAAGCGTGACAAGAAGTTCAGGTACATCAATTGTGGTAAGCCATATTTTAAAGGGCCTGACAACTTTGTACCCCCAGACAATGAAGATACGATTCTTATGGCGAAATCAAATATGTTGGACCTGTCCAATATCACCACTGTTCCAGGCTGGACAATGAAAGACAAAGCACAGTTTTTGTTGTTACTGCATAAACTGTCTGTTAAATTACAAAAGGAGAAGAACATGTCCAGAATGGCTCAATTAAAACGTGATAATAAAGTAAAACCCATACAAGACTTCAAAAATATGATATCAATGATAAAAGAAGAAAATTCTGCATTGGAGAAAAAGGCCTTATCTCAAATTGCACTTGCAATTAATGAAGAGTATGATTGGGACTGGATTGCTAATCAAACAAATTACAGACATAGTGCTCAAGAATACCGATCTCTGTGGAAGTTGTTCTTGCATCCTAGTATCAACAAAAGTAGCTGGAGCCGGGAAGAACATACAAAGTTGCATAAAATAGCTCACGACCACAATTTGACCGGGTGGGAACAGATTGCTCTAGAACTCAATACAGGCCGAACTGCCTATCaatgttttgtatattttcgaaCCAATGTAAGTAATTCATTCACTGGTCAAAAATGGtcaaaagaagaagaagaatatctAAAGAGGTTGATTGATTATCACAAAGAACAATAttacattccttggagcaaaaTTGCATCATATATGGAAAATAGGACAAAAGTACAgatttataacaaatatttcaGACTTATGGAGCTCCGCAAAGGGAGATTCCTACCTGAGGAGGATACTGTCATTCTTACTTGTATCAAAGACTTTGGCTCTGATTTTAGaagattaacaaaatatttaccgGGCCGTTCTAATGTACAAATACGTAACAGATATCATGTGCTAGCTCAAAGCAAATCTACTAAAACATCAATCGTTTGGACTATAGAAGAAGACAGAAAACTTGTCCAATTCATGGCAAACCAAGACTCATCTTTTAACTATTCCAGCTTGACACGTCATTTCCCAGGCAAAGATAGATCTCATATCCGAACTAGGTACATGACACTGTGTAAATGGATGAAAGGGCATCCTAATACAGATATTGCAAAAGCGCCAAGAAGAGGTGCACGCAGACTTCGTCATGGAGAGGCTTCAAAAGATCTAAATAAAGCCATAGAAAACTTAAAGGTCCGAATAAAATCTGAAGTTGATTACAAAAAATCAACAAGAATTACTAAAGATTCTCCCGAAAATGATATTGATACAGCAATACTTGCTGCTTTGATTAATGAACATAACAAAGATGAACAAATGAAGCAAAAAAGTTGTGACAGTGAACAGCTAGAGACAGTCAATGCTATGGGCACTGCTGTTCCCTCCAATATAAACCAGATCAAGCAAATACTCATTCTGTTGGGTGCAAAGTTAGAGAAGGAAGCATTTGAAGCACAATATACTGAAAAGTATCCTAAGTACTCCGAACTATTGTTTGAGAATATGGAACAGTGTGTTGTAATAAAATCTTACTCCAAAAGGAATACAGTTAAGCTTGTTGATGCAAAAGCTCCTAGTGTATGGGGAGATAACCAATTAAGTAAATTAGAGTATGTCATGCCTCCTAACTATGACACTATAACTGGTTGCAAGGGAATAATGTCAAATGTAATTTCAAAGCCAAGGAATAATGATATTGTCAATTTAGCTATACTTGCAAAGAGAAATGTTTTATTACAAGAGCAACTAGATTTGTTAGTGGACAGGTTCAGGGTGTTGTTTCTGTGGCCAATGATGCTTAGCAATGAGGTCCCTAATTTTCAGAATAGGCCAGCAATAACTGCaccaacatataaaaaaaagagtgtGACAGTTTTAGCAGGCGATCCAGGAATAGCGATTCCCTCATCATCTAAATCTATGTTTTCAATCATCAATGAAAACATAGATTTAGATGATGAAATTGAAGACACCAAAGATATTGTTTTGTCACATGATTTTGGGGATGTACCTAGTTGTTCATATAAAaatccttaa
Protein Sequence
MDLDSDSDYETQMREVDQLNAVLQADEQPNEIASEYSSTISTFSLSSKNQEEYAKIEHALALNKLIDDKLRQLEGILYNRLHECRERLKKIQDSPTTPDKRDKKFRYINCGKPYFKGPDNFVPPDNEDTILMAKSNMLDLSNITTVPGWTMKDKAQFLLLLHKLSVKLQKEKNMSRMAQLKRDNKVKPIQDFKNMISMIKEENSALEKKALSQIALAINEEYDWDWIANQTNYRHSAQEYRSLWKLFLHPSINKSSWSREEHTKLHKIAHDHNLTGWEQIALELNTGRTAYQCFVYFRTNVSNSFTGQKWSKEEEEYLKRLIDYHKEQYYIPWSKIASYMENRTKVQIYNKYFRLMELRKGRFLPEEDTVILTCIKDFGSDFRRLTKYLPGRSNVQIRNRYHVLAQSKSTKTSIVWTIEEDRKLVQFMANQDSSFNYSSLTRHFPGKDRSHIRTRYMTLCKWMKGHPNTDIAKAPRRGARRLRHGEASKDLNKAIENLKVRIKSEVDYKKSTRITKDSPENDIDTAILAALINEHNKDEQMKQKSCDSEQLETVNAMGTAVPSNINQIKQILILLGAKLEKEAFEAQYTEKYPKYSELLFENMEQCVVIKSYSKRNTVKLVDAKAPSVWGDNQLSKLEYVMPPNYDTITGCKGIMSNVISKPRNNDIVNLAILAKRNVLLQEQLDLLVDRFRVLFLWPMMLSNEVPNFQNRPAITAPTYKKKSVTVLAGDPGIAIPSSSKSMFSIINENIDLDDEIEDTKDIVLSHDFGDVPSCSYKNP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00208828;
80% Identity
-