Blac001988.1
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- SNAPC4
- Assembly
- GCA_905147135.1
- Location
- LR990039.1:32233202-32235118[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-09 3.4e-06 28.1 0.2 1 44 118 163 118 165 0.94 2 4 8.3e-11 1.3e-07 32.7 0.5 3 44 173 218 172 220 0.93 3 4 6e-11 9e-08 33.1 0.0 1 43 224 266 224 268 0.97 4 4 0.0013 2 9.6 0.0 4 43 280 321 279 324 0.86
Sequence Information
- Coding Sequence
- ATGTTGGACCTGTCCAATATCACTACTGTTCCAGGCTGGACAATGAAAGACAAAGCACAGTTTTTGTTATTACTGCATAAACTGTCTGTTAAATTACAGAAGGAGAAGAACATGTCCAGAATTGTTAAATTAAAACGTGATAATAAAGTAAAACCCATACAAgactttaaaaatatgatatCAATGATAAAAGAAGAAAATTCTGCTTTGGAAAAAAAGTCATTATCTCAAATTGCACTTCCAATTAATGAAGAGTATGATTGGGACTGGATTGCTAACCAATCAAATTACAGACATAAAGCTCAAGAATACCAATCTCTGTGGAAGTTGTTCTTGCATCCTAGTATCAACAAAAGTAGCTGGAGCCAGGAAGAACATACAAACTTGCATGAAATAGCTCACAACCACAATTTGTCTGGGTGGGAACAAATTGCTCGAGAACTCAATACAGGCCGAACTGCTTATCaatgttttgtatattttcgaaCCAATGTAAGCAATTCATTTACTGGTCATAAATGGTCaacagaagaagaagaatgtcTTAAGAAGCTGGTCGATTATCACAGAGAAGATTGTTACATTCCTTGGGGCAAAGTTGCATTACATATGGAAAATAGGACAAAAGTacagatttataataaatatttcagactTATGGAGCTCCGCAAAGGGAGATTCCTGCCTGAGGAAGATGCTGTCATTCTTACTTGTATTAGAAACTTTGGCTCTGATTTTAAAAGATTAATGCAATATTTACCTGGCCGTTCTAATGCACAAATACGCAACAGATATCATGTGCTAGCCCAAAGCGAAGGTACTGGAACATCAATTATTTGGACTATAGAAGAAGACAAAAAACTAATCCAATTCATGGCAAACCAAGACTCATCTTTTAACTATTCCAGCTTGACATGTCATTTCCCAGGCAAAGATAGATCTCATATCCGAACTAGGCACATGACACTGCGTAAATGGATGAGAGGGCATCCTAATACAGATATTGCAAAAGCGCCAAGAAGAGGTGCACGCAGACTTCGTCATGGAGAGGCTTCAAAGGATTTAAATAAAGCCATAGAAAACTTAAAGGTCCGATTAAAATCtgaagttaataaaaaaaaatcaacaaagaTGACTAAAGATTCTCCCGAAAATGATATTGATACTGCAATACTTGCTGCTTTGATTAATGATCATAACAAAGAAGAACAAATGAAGCAAAAAAATAGTGACAGTGAAAGGCTAGAGACAGTCAGTGCTATGGGCACTGCTGTTCCCTCCAATATAGACCAGATCAAGCAAATACTCATTCTGTTGGGCTCAAAGTTAGACAAGGAAGCATttgaaaaacaatataataagaaGTACCCTGAGTACTCCAAACTATTGTTTGAGAATATGGAACAGTGTGTTGTGATAAAATCTTACTCCAAAAGGAAAACAGTTACGCTTGTTGATGCAACAACTCCTAGTGTATGGGGAGATAACCTATTAAGTAAATTAGAGTATGTCATACCTCCTAACTATGACACTATAACTGGTTGCAAGAAAGTAATGTCATATGTAACTTCAAAGCcaaggaataataataatgtcaatttaactATACTTGCAAAGAGAAATGTTTTATTACAAGAGCAACTAGATTTGTTAGTGGACAGGTTCAGGATGTTGTTTCTGTGGCCAATGATGCTTAGCAATGAGATTCCTAATTTTCAGAATAGGCCAGCACTAACTGCACCAacatatgaaaaaaataatgtgaCAGTTTTAGCAGGCGATCCAGGAATAGCGATTCCCTCATCCTCAGCCGGAATCATCAATGAAAACATAGATTTAGATGATGAAATTGATGAAGATATTGTTTTGACACATGATTTTAGGGACGAACCTAGTTGTTCTTATAAAAATCCTTGA
- Protein Sequence
- MLDLSNITTVPGWTMKDKAQFLLLLHKLSVKLQKEKNMSRIVKLKRDNKVKPIQDFKNMISMIKEENSALEKKSLSQIALPINEEYDWDWIANQSNYRHKAQEYQSLWKLFLHPSINKSSWSQEEHTNLHEIAHNHNLSGWEQIARELNTGRTAYQCFVYFRTNVSNSFTGHKWSTEEEECLKKLVDYHREDCYIPWGKVALHMENRTKVQIYNKYFRLMELRKGRFLPEEDAVILTCIRNFGSDFKRLMQYLPGRSNAQIRNRYHVLAQSEGTGTSIIWTIEEDKKLIQFMANQDSSFNYSSLTCHFPGKDRSHIRTRHMTLRKWMRGHPNTDIAKAPRRGARRLRHGEASKDLNKAIENLKVRLKSEVNKKKSTKMTKDSPENDIDTAILAALINDHNKEEQMKQKNSDSERLETVSAMGTAVPSNIDQIKQILILLGSKLDKEAFEKQYNKKYPEYSKLLFENMEQCVVIKSYSKRKTVTLVDATTPSVWGDNLLSKLEYVIPPNYDTITGCKKVMSYVTSKPRNNNNVNLTILAKRNVLLQEQLDLLVDRFRMLFLWPMMLSNEIPNFQNRPALTAPTYEKNNVTVLAGDPGIAIPSSSAGIINENIDLDDEIDEDIVLTHDFRDEPSCSYKNP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00208827;
- 90% Identity
- -
- 80% Identity
- -