Blac017967.1
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- -
- Assembly
- GCA_905147135.1
- Location
- LR990051.1:3230529-3232858[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-09 2.4e-06 28.2 0.0 1 41 14 54 14 57 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAGTCAAAACCCAGGAAAAGAGGTAGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGCAGTACAAAATAATCAACTTAATACAAATGCTGCAGCGTTGAAGTTCAATATTCCAAGACGCACCCTTAGAAACCATTTAGTAAGCGGTAACAGTACTAAAATAATTGGGAAGACAACTATTCTTACAAAACAATTAGAAGAAGATTTATCGCAGCGAATCAAACGTTTTGCAAAACTGGGTGTACCACTTACGCCTAGATTTATCAGGAAACAagcctttttattttgtgagaGGTTTAAAATCAAGCACTCGTTCAATATGTCAACAAGAATGGCTGGACGCAAATGGCTTAAAATGTTTTTGGCTCGAAACCCATCAATATCAAAAAGAAAACCCCAGCTAATGAATCCAGCTAGAGCTCAAAAAATGAATAAGCCCATTGTGAAAAACCATTTTGAAGAAGTGAAGAAACTCTATGAAGAGCTAGACATTATTGCACATCCAGAACGCTTGTATAACATGGATGAAAAAGGGTGTCGCATTACGGTCCACAAACAAACTGTAGTTTTGGCTGAAAAAGGGAATACAAGAGTACATCTTGTTGCTCCGGAACACGCCGAGAACGTTACAATAGCGATGTGCGTAAATGCGGTGGGTATTGCTATACCGcctatgattatttttaagggGATTAGGCATAGAGCAGGATTAGCATCAAATTTGCCACCTGGAACAAAGGTAAGCATGGCACCCAAAGGCAGCATGACCAGTAGCTTATTCGTAGAGTTCATACAACATTTAGCACAACATAAAGTACCCGGTAAATGTCTGCTTATCTTTGATGGCGCAAAGTGTCATTTATCATATGAGTCTCTGGAAGAagcagataaaaataatatagtactaTACTGCTTACCTTCGAACACCACGCACGAACTCCAACCTCTAGATAAATCAGTGAATCGGTCCTTCGAACATCACTGGGATGAAGAAGTTTTGAACTACCTGTGCAATTCTCAAGAGAGAAATTTAAACAAAGCTGCGTTTAACAAAATTTTCTCTCGAACATGGCCAAAGTGTATGACTCAAACCAATATAACGAATGGATTCAAAGCCACTGGTTTATACCCCTTTGATCCTGATGTCATACCCGAAGATGCTTATGCTCCTTCAATTGTAACTGAAAGACCTTTATCGGAAACGTTACAACACCAGATCGACCAACCACTTATATCTGTTCAAGTCTCGCCCCCTGtgtctgaatttaaaaaagtgtcaGAATTGTCGTCTCAGTCTCTGATAGATGAAAGGAGTTCTTCAACTGATGCTTCAGACTTAGAAGTAGATATTACGGTCAATGATCAGTGCCGCCCCATGCTGCTAAGTTCAGTACATCGTTTTAACGTCGCAGATACGAAACATGACCCTCAACCATCTCTGTACGATTATCCTCTTCCGAGTACGTCCGGCCTACAAGAAAATATCGTTTGTTCTAGCTCTGAATCTGATATTGATTTGAATCTTAGTGAATCATTTATCAAAGATAACTACATGACTAAACTTCAAGTCTCGGATTTATACACTTCTTCTTCGTCATGTGATGATGACCTAGAGCAGAAAAAAGAAATCACTCCGAAAAAACgattaatacaaaacaaaagctcaattaaaacaaaagctCAACTAAAGAGTCATGAGACTAGATCTTCGGATGATGACGAGCCGTTAATTAATCTAATAGAGGATGAAGAAGAATCGTTTCATGCTTTTTTGCCTACTCCAAACTACGCTACAATAAAGTCTTCACGTCCACGGCAAAAAGCTCTTAATTATAAGGGACAAAGAATAGTTAAAGATTTATTCaagactgaaaaaaaaaagaatgagaTGACGCAAGCGACGAGTAAGAAAAAAGGAAAGTCTACAAGTAAACGAGACCaaaaaaagaaaaccaaaaataaaaatgattccGTAAAACGGCTAAAAAGAACAGTACAACAAGAAAACAGTAAAAGATCGAAAATAGAGATGAAGAAAAGTGCAGAAGGTGAAGAAAAGGAATGGTACTGTCACGCATGTGGCGAGAATAGAATGGAAGACATGAGACAATGTCCCGAATGTCAAAAGTGGTATCACGAGGAGTGTATGGGTCTCACTAAAAACGATCTCAAATTTATATGCTCAAATTGTGATTAA
- Protein Sequence
- MSESKPRKRGSTWDEDSLRRAMEAVQNNQLNTNAAALKFNIPRRTLRNHLVSGNSTKIIGKTTILTKQLEEDLSQRIKRFAKLGVPLTPRFIRKQAFLFCERFKIKHSFNMSTRMAGRKWLKMFLARNPSISKRKPQLMNPARAQKMNKPIVKNHFEEVKKLYEELDIIAHPERLYNMDEKGCRITVHKQTVVLAEKGNTRVHLVAPEHAENVTIAMCVNAVGIAIPPMIIFKGIRHRAGLASNLPPGTKVSMAPKGSMTSSLFVEFIQHLAQHKVPGKCLLIFDGAKCHLSYESLEEADKNNIVLYCLPSNTTHELQPLDKSVNRSFEHHWDEEVLNYLCNSQERNLNKAAFNKIFSRTWPKCMTQTNITNGFKATGLYPFDPDVIPEDAYAPSIVTERPLSETLQHQIDQPLISVQVSPPVSEFKKVSELSSQSLIDERSSSTDASDLEVDITVNDQCRPMLLSSVHRFNVADTKHDPQPSLYDYPLPSTSGLQENIVCSSSESDIDLNLSESFIKDNYMTKLQVSDLYTSSSSCDDDLEQKKEITPKKRLIQNKSSIKTKAQLKSHETRSSDDDEPLINLIEDEEESFHAFLPTPNYATIKSSRPRQKALNYKGQRIVKDLFKTEKKKNEMTQATSKKKGKSTSKRDQKKKTKNKNDSVKRLKRTVQQENSKRSKIEMKKSAEGEEKEWYCHACGENRMEDMRQCPECQKWYHEECMGLTKNDLKFICSNCD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00276280;
- 90% Identity
- iTF_00207833; iTF_00074435; iTF_00207843; iTF_00074436; iTF_00207844; iTF_01021124; iTF_00074437; iTF_00074438; iTF_00162631; iTF_00425319; iTF_01083271; iTF_00026792; iTF_00162633; iTF_01436969; iTF_01436970; iTF_00248012; iTF_00786702; iTF_00074447; iTF_00786703; iTF_01281265; iTF_00164275; iTF_00247126; iTF_01172282; iTF_01021115; iTF_00382526; iTF_01091679; iTF_00661216; iTF_00786701; iTF_01021117; iTF_00809055;
- 80% Identity
- -