Basic Information

Insect: Carposina sasakii
Gene Symbol: -
Assembly: GCA_014607495.2
Location: CP053172.1:551914-553788[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.8e-09 1.5e-06 28.5 0.0 1 41 14 54 14 57 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.8e-09	1.5e-06	28.5	0.0	1	41	14	54	14	57	0.89

Sequence Information

Coding Sequence: ATGTCTGAGTCAAAACCCAGGAAAAGAGGTAGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGCAGTACAAAATAATCAACTTAATACAAATGCTGCAGCGTTGAAGTTCAATATTCCAAGACGCACCCTTAGAAACCATTTAGTAAGCGGTAACAGTACTAAAATAATTGGGAAGACAACTATTCTTACAAAACAATTAGAAGAAGATTTATCGCAGCGAATCAAACGTTTTGCAAAACTGGGTGTACCACTTACGCCTAAATTTATCAGGAAACAAGCATTTTTATTTTGTGAGAGGTTTAAAATCAAGCACTCGTTTAATATGTCAACAAGAATGGCTGGACGCAAATGGCTCAAAATGTTTTTGGTTCGAAACCCATCAATATCAAAAAGAAAACCCCAGCTAATGAATCCAGCTAGAGCTCAAAAAATGAATAAGCCCATTGTGAAAAACCATTTTGAAGAAGTGAAGAAACTCTATGAAGAGCTAGACATTATTGCACATCCAGAACGCTTGTATAACATGGATGAAAAAGGGTGTCGCATTACGGTCCACAAACAAACTGTAGTTTTGGCTGAAAAAGGGAATACAAGAGTACATCTTGTTGCTCCGGAACACGCCGAGAACGTTACAATAGCGATGTGCGTAAATGCGGTGGGTATTGCTATACCACCTATGATTATTTTTAAGGGGATAAGGCACATATCAGAATTAGCATCAAATTTGCCACCTGGAACAAAGGTAAGCATGGCACCCAAAGGCAGCATGACCAGTAGCTTATTCGTAGAGTTCATACAACATTTAGCACAACATAAAGTACCCGGTAAATGTCTGCTTATCTTTGATGGCGCAAAGTGTCATTTATCATTTGAGTCTCTGGAAGTAGCAGATAAAAATAATATAGTTCTATACTGCTTACCTTCGAACACCACGCACGAACTCCAACCTCTAGATAAATCAGTGAATCGGTCCTTCGAACATCACTGGGATGAAGAGGTTTTGAACTACCTGTGCAATTCTCAAGAGAGAACTTTAAACAAAGCTGCGTTTAACAAAATTTTCTCCCGAACATGGCCAAAGTGTATGACTCAAACTAATATAACGAATGGATTCAAAGCCACTGGTTTATACCCCCTTGATCCTGATGTAATACCCGAAGATGCTTATGCTCCTTCAATTGTAACTGAAAGACCTTTATCGGAAACGTCACTACACCAGATCTACCAACCACTTATATCTGTTCAAGTCTCGCCCCCTGTGTCTGAATTTAAAAAAGTGTCAGAATTGTCGTTTCAGTCTCTAATAGATGAAAGGAGGTCAGCTCATGTTTCTAACGTTTCTTCAATTTTTCCATCAACTTCCGAAGAGAAGATAGTATCGACATCGCCAAAATTTTCAGCTGCAACAGCAAAAAGAAAACCCGTTCTTGTTTCTTACAGTTCTTCAACTGATGCTTCAGACTTAGAAGTAGATATAACGGTCAATGATCAGTGCCGCCCCATGCTGCTAAGTTCAGTACATCGTTTCAACGTCGCAGATACGAAACATGACCCTCAACCATCTCTGTACGATTATCCTCTTCCGAGTACGTCCGGCCTACAAGAAAATATCGTCTGTTCTAGCTCTGAATCTGATCTTGATTTGAATCTTAGTGAATCATTTATCAAAGATCACTACATGACTAAACTTCAAGTCTCGGATTTATACACTTCTTCGTCATTTGATGATGACCTAGATCAGAAAAAAGAAATCACTCCGAAAAAACGATTAATACAAAACAAAAGCTCAATTAAAATAAAAGCTCAACTAAAGAGTCATGAGACTAGATCTTCGGATGATGACCAGCCAGAATCTAATCGAGGATAA
Protein Sequence: MSESKPRKRGSTWDEDSLRRAMEAVQNNQLNTNAAALKFNIPRRTLRNHLVSGNSTKIIGKTTILTKQLEEDLSQRIKRFAKLGVPLTPKFIRKQAFLFCERFKIKHSFNMSTRMAGRKWLKMFLVRNPSISKRKPQLMNPARAQKMNKPIVKNHFEEVKKLYEELDIIAHPERLYNMDEKGCRITVHKQTVVLAEKGNTRVHLVAPEHAENVTIAMCVNAVGIAIPPMIIFKGIRHISELASNLPPGTKVSMAPKGSMTSSLFVEFIQHLAQHKVPGKCLLIFDGAKCHLSFESLEVADKNNIVLYCLPSNTTHELQPLDKSVNRSFEHHWDEEVLNYLCNSQERTLNKAAFNKIFSRTWPKCMTQTNITNGFKATGLYPLDPDVIPEDAYAPSIVTERPLSETSLHQIYQPLISVQVSPPVSEFKKVSELSFQSLIDERRSAHVSNVSSIFPSTSEEKIVSTSPKFSAATAKRKPVLVSYSSSTDASDLEVDITVNDQCRPMLLSSVHRFNVADTKHDPQPSLYDYPLPSTSGLQENIVCSSSESDLDLNLSESFIKDHYMTKLQVSDLYTSSSFDDDLDQKKEITPKKRLIQNKSSIKIKAQLKSHETRSSDDDQPESNRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01538691; iTF_01538692; iTF_00208804; iTF_00801765; iTF_00726283; iTF_00726284; iTF_00704924; iTF_00661217; iTF_00786702; iTF_00662167; iTF_00661215; iTF_00302028; iTF_00850609; iTF_01081524; iTF_01375707; iTF_00162614; iTF_00208803; iTF_00162617; iTF_00276281; iTF_00276284;
90% Identity: iTF_00425315; iTF_00208804; iTF_01424996; iTF_00801765; iTF_00425318; iTF_01338635; iTF_00704911; iTF_00850609; iTF_00281141; iTF_00428951; iTF_00428949; iTF_00428950; iTF_00662167; iTF_00162617; iTF_00276281; iTF_00276284; iTF_00704924; iTF_00661217; iTF_00647933; iTF_00661215;
80% Identity: -