Badu027052.1
Basic Information
- Insect
- Blastobasis adustella
- Gene Symbol
- -
- Assembly
- GCA_907269095.1
- Location
- OU026132.1:6703594-6706118[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.03 20 5.9 0.1 1 23 14 36 14 38 0.91 2 2 5.9e-08 4e-05 24.1 0.0 1 41 46 86 46 89 0.88
Sequence Information
- Coding Sequence
- ATGTCGGAGTCAAAACCCAGGAAAAGAGGTAGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGCAGTACAAAATAATCAACTTAATACAAATGCTGCAGCGTTGAAAAGATTTATCGCAGGTACATGGGATGAAGACAGTTTAAGACGTGCCATGGAAGTAGTACAAAATAATCAACTTAATACAAATGCTGCAGCGTTGAAGTTCAATATTCCAAGACGCACCCTTAGAAACCATTTAGTAAGCGGTAACAGTACTAAAATAATTGGGAAGACAACTATTCTTACAAAACAATTAGAAGAAGATTTATCGCAGCGAATCAAACGTTTTGCAAAACTGGGTGTACCACTTACGCCTAAATTTATCAGGAAACAAGCCTTTTTATTTTGTGAGAGGTTTAAAATCAAGCACTCGTTCAATATGTCAACAAGAATGGCTGGACGCAAATGGCTCAAAATGTTTTTGGCTCGAAACCCATCAATATCAAAAAGAAAACCCCAGCTAATGAATCCAGCTAGAGCTCAAAAAATGAATAAGCCCATTGTGAAAAACCATTTTGAAGAAGTGAAGAAACTCTATGAAGAGCTAGACATTATTGCACATCCAGAACGCTTGTATAACATGGATGAAAAAGGGTGTCGCATTACGGTCCACAAACAAACTGTAGTTTTGGCTGAAAAAGGGAATACAAGAGTACATCTTGTTGCTCCGGAACACGCCGAGAACGTTACAATAGCGATGTGCGTAAATGCGGTGGGTATTGCTATACCGCCTATGATTATTTTTAAGGGGATTAGGCACAGAGCAGGATTAGCATCAAATTTGCCACCTGGAACAAAGGTAAGCATGGCACCCAAAGGCAGCATGACCAGTAGCTTATTCGTAGAGTTCATACAACATTTAGCACAACATAAAGTACCCGGTAAATGTCTGCTTATCTTTGATGGCGCAAAGTGTCATTTATCATATGAGTCTCTGGAAGAAGCAGATAAAAATAATATAGTACTATACTGCTTACCTTCGAACACTACGCACGAACTCCAACCTCTAGATAAATCAGTGAATCGGTCCTTCGAACATCACTGGGATGAAGAAGTTTTGAACTACCTGTGCAATTCTCAAGAGAGAAATTTAAACAAAGCTGCGTTTAACAAAATTTTCTCTCGAACATGGCCAAAGTGTATGACTCAAACCAATATAACGAATGGATTCAAAGCCACTGGTTTATACCCCTTTGATCCTGATGTCATACCCGAAGATGCTTATGCTCCTTCAATTGTAACTGAAAGACCTTTATCGGAAACGTTACAACACCAGATCGACCAACCACTTATATCTGTTCAAGTCTCGCCCCCTGTGTCTGAATTTAAAAAAGTGTCAGAATTGTCGTCTCAGTCTCTGATAGATGAAAGGAGGTCAGCTCATGTTTCTAACGTTTCTTCAATTTTTCCATCAACTTCCAAAGAGAAGATAGTATCGACATCGCCAAAATTTTCAGCTGCAACAGCAAAAAGAAAACCCGTTCTTGTTTCTTACAGTTCTTCAACTGATGCTTCAGACTTAGAAGTAGATATTACGGTCAATGATCAGTGCCGCCCCATGCTGCTAAGTTCAGTACATCGTTTCAACGTCGCAGATACGAAACATGACCCTCAACCATCTCTGTACGATTATCCTCTTCCGAGTACGTCCGGCCTACAAGAAAATATCGTCTGTTCTAGCTCTGAATCTGATCTTGATTTGAATCTTAGTGAATTATTTATCAAAGATAACTACATGACTAAACTTCAAGTCTCGGATTTATACACTTCTTCTTCGTCATGTGATGATGACCTAGAGCAGAAAAAAGAAATCACTCCGAAAAAACGATTAATACAAAACAAAAGCTCAATTAAAACAAAAGCTCAACTAAAGAGTCATGAGACTAGATCTTCGGATGATGACGAGCCGTTAATTAATCTAATAGAGGATGAAGAAGAATCGTTTCATGCTTTTTTGCCTACTCCAAACTACGCTACAATAAAGTCTTCACGTCCACGGCAAAAAGCTCTTAATTATAAGGGACAAAGAATAGTTAAAGATTTATTCAAGACTGAAGAAAAAAAGAATGAGATGACGCAAGCGACGAGTAAGAAAAAAGGAAAGTCTACAAGTAAACGAGACCAAAAAAAGAAAACCAAAAATAAAAATGATTCCGTAAAACGGCTAAAAAGAACAGTACAACAAGAAAACAGTAAAAGATCGAAAATAGAGATGAAGAAAAGTGCAGAAGGTGAAGAAAAGGAATGGTACTGTCACGCATGTGGCGAGAATAGAATGGAAGACATGAGACAATGTCCCGAATGTCAAAAGTGGTATCACGAGGAGTGTATGGGTCTCACTAAAAACGATCTCAAATTTATATGCTCAAATTGTGATTAA
- Protein Sequence
- MSESKPRKRGSTWDEDSLRRAMEAVQNNQLNTNAAALKRFIAGTWDEDSLRRAMEVVQNNQLNTNAAALKFNIPRRTLRNHLVSGNSTKIIGKTTILTKQLEEDLSQRIKRFAKLGVPLTPKFIRKQAFLFCERFKIKHSFNMSTRMAGRKWLKMFLARNPSISKRKPQLMNPARAQKMNKPIVKNHFEEVKKLYEELDIIAHPERLYNMDEKGCRITVHKQTVVLAEKGNTRVHLVAPEHAENVTIAMCVNAVGIAIPPMIIFKGIRHRAGLASNLPPGTKVSMAPKGSMTSSLFVEFIQHLAQHKVPGKCLLIFDGAKCHLSYESLEEADKNNIVLYCLPSNTTHELQPLDKSVNRSFEHHWDEEVLNYLCNSQERNLNKAAFNKIFSRTWPKCMTQTNITNGFKATGLYPFDPDVIPEDAYAPSIVTERPLSETLQHQIDQPLISVQVSPPVSEFKKVSELSSQSLIDERRSAHVSNVSSIFPSTSKEKIVSTSPKFSAATAKRKPVLVSYSSSTDASDLEVDITVNDQCRPMLLSSVHRFNVADTKHDPQPSLYDYPLPSTSGLQENIVCSSSESDLDLNLSELFIKDNYMTKLQVSDLYTSSSSCDDDLEQKKEITPKKRLIQNKSSIKTKAQLKSHETRSSDDDEPLINLIEDEEESFHAFLPTPNYATIKSSRPRQKALNYKGQRIVKDLFKTEEKKNEMTQATSKKKGKSTSKRDQKKKTKNKNDSVKRLKRTVQQENSKRSKIEMKKSAEGEEKEWYCHACGENRMEDMRQCPECQKWYHEECMGLTKNDLKFICSNCD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00074435; iTF_00207843; iTF_00425315; iTF_00074436; iTF_00207844; iTF_01021124; iTF_00074437; iTF_00074438; iTF_00425318; iTF_00162631; iTF_00425319; iTF_01083271; iTF_00026792; iTF_00162633; iTF_01436969; iTF_01436970; iTF_01338635; iTF_00248012; iTF_00786701; iTF_00074447; iTF_00786703; iTF_01281265; iTF_00164275; iTF_00281141; iTF_00428949; iTF_00247126; iTF_00428950; iTF_00428951; iTF_01172282; iTF_01021115; iTF_00382526; iTF_01091679; iTF_00661216; iTF_00162625; iTF_01424996; iTF_00237453; iTF_00704911; iTF_00647933; iTF_01021117; iTF_00809055;
- 90% Identity
- iTF_00208803;
- 80% Identity
- -