Blac000890.2
Basic Information
- Insect
- Blastobasis lacticolella
- Gene Symbol
- bab1
- Assembly
- GCA_905147135.1
- Location
- LR990039.1:13769656-13779480[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-17 2.1e-14 54.0 0.0 1 43 47 90 47 92 0.95 2 2 9.6 6.2e+03 -1.9 1.6 6 15 186 195 182 197 0.83
Sequence Information
- Coding Sequence
- ATGCTGGACTTCTCAACATTCGTGGAAGCAGATAGCTACCAGTACCAGCTGCAGTCTATGTGGCAGAAGTGCTGGAACACCAACCAGAGCCTGGTGCACAACCTGCGGTTCCGCGAGCGCGGGCCCCTCAAGTCCTGGCGGCCGGAGACCATGGCCGAAGCGATCTTCTCCGTGCTGAAGGAGGGCCTCTCACTGTCGCAGGCCGCTAGGAAGTACGACATACCGTATCCGACGTTCGTGCTTTACGCCAACCGCGTACACAACATGCTGGGGCCCAGTGCGGATGGCGGCGCAGATTTGAGACCGAAGGGCCGCGGCCGGCCTCAGCGGATCTTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTGATCCGCGCGGTGGTGTTCCGCGAcacgcacgcgccgcacgcgccgcacgcgcaccACATCAAGGAGGAGGTGCTGCCCGTGTACCCCGCCATCACGGACGGAATGACGAACGTGCAGAGCTCGTACGCAACGGTGCCCTGCGGCAACGGGCGCGAAGGCGGCGTGTCGCCGAAcgccgcggccgcggccgccgtgGCCGCCGTGGCGCACGGGCTGCGCCGCCAGATGTGCAACATGGTGGTGGCGGCGCAGCGGCCGCCCGACCACCCGCCGCACCTGGGCCTGCCGCCCATGCCGCTGCAGTCGccgcggctgccgtcgccgatGTCCGCCGGGCTGGAGTCGCCGCTgtgctcgccgccgccgcccgggcACGCGCTCGAGCCGGCCAAGCCCGCGGACCCGTTCCGCCCTTTCGCGTCCCCGCGCCCGGATAGCCGCTACAGCGAACGCGACGTCGTGGCTGAGATCACTGACATGGGTCCGCCGAAGACACCGGTATCGCTGACTAAGAATGGAAAGGATCAGCTATCGACGCCGGTGCCGGTAAAGATGGAGCCGCCCCCGGCGGAGGCGCGCGCCGAGAACATCTGA
- Protein Sequence
- MLDFSTFVEADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHAPHAHHIKEEVLPVYPAITDGMTNVQSSYATVPCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPMPLQSPRLPSPMSAGLESPLCSPPPPGHALEPAKPADPFRPFASPRPDSRYSERDVVAEITDMGPPKTPVSLTKNGKDQLSTPVPVKMEPPPAEARAENI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079819;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -