Basic Information

Gene Symbol
-
Assembly
GCA_905404145.1
Location
FR989890.1:926925-942909[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-12 6.5e-09 36.7 0.0 3 89 224 297 222 297 0.89

Sequence Information

Coding Sequence
ATGACCAGCGCTGGTCTTCCGGACGAAGTGCTTGCCATCAACGACAAGGTAGTTCTCCGTGCAGAGGACCTTCTCTCGTGGATGTGCAACGGGCAGGACTGGACGTACGGCCTGAAGGCGGTGTGGCGCGGCGCGTGCGCCCCGCACGCCGACGAGAGGCACACCGCGCCCCTGCATTCCACAAGACTCGACTTCTCCGATGTCGACAAGGAGAAGAGCGCCATCGCTACTGACGCGGACAGCCCAGGCGTCGTGGTGTTCTCGTACCCCCGATACTGCCGGTACCGGGCGCTCCTCTCCCGGCTTGAAGGCATCCAGGCGGCCTGGCTGCGGGACTCGCTCGTTGCGGCTCTGGGTGGATACTCCGCCCCCACAAAGAACACCAGGATCCTGTACTGCAAGGATACCTTCGAATACCCCGAGCTGGAAGGTCACGAGTTCGTGTGCAACCACCTGGCTCCCAAGCTGAAAGGGAGGCCGCGCGGCCGCCGCCGCCGCCCGCCGCGCTCGCGCACTCACTCACCCGAGTCGCGCTCCAGTGAGGACGAGAGACCGCCACCCCCAGTTACCCATCACCCGACTCCCCGGCGTCTCTCCCTTCGCAACGGTCTCGAGAAGCGCAGCTCCGACTCGGACCCGGACCGGGAGACGAACGTGTCGGACGAAGACAAGGCGTTCCTCCGGATGCTGCGCCACTTCCACCGGGATAAAGGACTCAGCTTCACGCAGGCTCTCTCGCTCAAACATTTGTCGCTGCGAGCTCTGTACACGCTAGTCTTGTCTCGCGGCGGGTATGACGCCGTGTGCCGGCTGCGGCTGTGGCGCGGGCTCTTCCACTCCAACCACTCCACCACCAAAGCCGTTTACGAGAGGTTTCTCCTCCCGTTGGAGAACCACGAGCGGCGTAACGGTGTGAAACCTAACGGCATAACGGAACCGGATACCATCACGGTGTGCGACTCCCCCCCGCCGCCCCCGCACGCACACAGAGATAGCGAGACTGGCGAAGTTAAAGAGGATATCAATGTCACGTCGAAACACGCAGAAGAACTGAATAGGGAGTTTCTCGAGTCTCTACCCAAAGAAGAAAAACCTTTGAAAATCACAGTGAAACCTGTGGAAAAACTTTTAGACACGGAAAAGAGAGAGACCGCCTTCGAGAAGAGAGAAAATGCGTCGGAGCACAATGATATGGGGTCGGAAAAGAGGGAGATCGCGGGGGAAAAGAGAGAACATGATAATATGGAAGAAAGAAAAGAAGGCTTTCTGAGTGAGCTCGCAAATAAATTACATTTAGGTAACTCGGATACGACGTTCCTGCAAGAGTTGGCGCGACGCGGCGCCGCGCCTCCACCCCCCGCCGCGCCGCACCCGCCCGCACCCTTCAACGCACACGCACACACTGAACAGAAGGGCTCGCGTCCGGCGGGGCGGAGCTCCCTGCGCGCGGTGCGAGTGAAGCCCGCGAGAGCGCACACCGCCCCAAACACTGCGCCCAACACGCCGCCGGTGCCCCCTCTGCGGCCGGACTCGGCGTCATCGTCCCCCCCTTCTCTGCCCCCCACCACGGCGCCGGTCACCAACTTCGGCATCCACCATCCGCCGCCCCAGCAGAGCAACAGCGACGATGAAATAGTCGAGGTCCCATACAAACCTAAAACGCCAGAGATCATCGACCTGGACGAATACCCGGAAAGTCCGCAATCTATCAAGAAGAAGAAACTGGACATACTCAAGGAACGGGGGCTAGAGGTCACGCCTCTACCCGCACCCGCCTGGCCTGCCCCCGTCCTTGCGACATCCCTCATCGCCCCCAGCCCGATACTCCTGCCAGCGGTACAGCACCAAATAATGACCAACGCACAACTATTCCAAATGTATAACATAGTCCCCCAAAATTATAATGGAATGCAACCCCCAAAAGTGATCCAAGCAAGTCCATTATACGGAACAACTAGTCCAGAGAAAACTGTCTATGGGAATCCTAAAGACCCCTTTATGCCTCCCCCACATGTACTACATGGTGCCCCCATCAAACCCACCAAAAGTGTGCTGCAACCACCTACTCCAGCGCAGGATATACTCGACCTAACTTGCAAGTTGACCACCAAACCCGCAGTTGAAATAGTACGCGTGCCAACTACGCCATCGCCGTCCAAAATGCAAACAGCTCAAAATTTGACCAAAAACTATTCAATTGTAGATGGGAAGGCAGTAGTCGGTTCTAATTTAGAAATTACATTAGTAAATAAAGCTCAACCTTTATCCCCATTGAAGAAACAAACCCCCCAAAAGAGGTCTTCGAATGGTAAATTTACAAAGACCCCAACACCCCCTAAAGACTACCCAAAGCCATACAAAAAGGCTCCTATAATAGTCCCTAATTATCAAGTTAGCCGCGAAGATAGTCCTACAAGCTCAACTAGTTCGCAAAACAGCCAAAAAAATCAAATTCCTACCACAATTGACCCCAAGGGGCCTGTGACGTCGTTTCTAGACCCATCTAAGGGGCATATGGGGTCATATTTGGATCCTTCCAAAGGTCCCGTGGCGCCATTTTTAGACCCGTCCAAAGGGCCTGTAGCGTCGTTCTTGGACCCTTCTAAGGGGCCAGTAACGTCATTTTTGGACCCCTCCAAGGGGCCTGTATCTTCATTCTTGGATCCATATATGGCGTTATATAATTTAGCGGGGCAAATGGACCCAAGACAGTTGGCAGCGTATAGGGAAATTATGGCAAATCCATTTAGATATTCTGGGCTTTTGAATATGGGTGTTGGTAACCCAACAACGAAGAATTAG
Protein Sequence
MTSAGLPDEVLAINDKVVLRAEDLLSWMCNGQDWTYGLKAVWRGACAPHADERHTAPLHSTRLDFSDVDKEKSAIATDADSPGVVVFSYPRYCRYRALLSRLEGIQAAWLRDSLVAALGGYSAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRPPRSRTHSPESRSSEDERPPPPVTHHPTPRRLSLRNGLEKRSSDSDPDRETNVSDEDKAFLRMLRHFHRDKGLSFTQALSLKHLSLRALYTLVLSRGGYDAVCRLRLWRGLFHSNHSTTKAVYERFLLPLENHERRNGVKPNGITEPDTITVCDSPPPPPHAHRDSETGEVKEDINVTSKHAEELNREFLESLPKEEKPLKITVKPVEKLLDTEKRETAFEKRENASEHNDMGSEKREIAGEKREHDNMEERKEGFLSELANKLHLGNSDTTFLQELARRGAAPPPPAAPHPPAPFNAHAHTEQKGSRPAGRSSLRAVRVKPARAHTAPNTAPNTPPVPPLRPDSASSSPPSLPPTTAPVTNFGIHHPPPQQSNSDDEIVEVPYKPKTPEIIDLDEYPESPQSIKKKKLDILKERGLEVTPLPAPAWPAPVLATSLIAPSPILLPAVQHQIMTNAQLFQMYNIVPQNYNGMQPPKVIQASPLYGTTSPEKTVYGNPKDPFMPPPHVLHGAPIKPTKSVLQPPTPAQDILDLTCKLTTKPAVEIVRVPTTPSPSKMQTAQNLTKNYSIVDGKAVVGSNLEITLVNKAQPLSPLKKQTPQKRSSNGKFTKTPTPPKDYPKPYKKAPIIVPNYQVSREDSPTSSTSSQNSQKNQIPTTIDPKGPVTSFLDPSKGHMGSYLDPSKGPVAPFLDPSKGPVASFLDPSKGPVTSFLDPSKGPVSSFLDPYMALYNLAGQMDPRQLAAYREIMANPFRYSGLLNMGVGNPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-