Basic Information

Gene Symbol
-
Assembly
GCA_905404285.1
Location
FR990094.1:1223144-1237314[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-12 9e-09 36.2 0.0 3 89 220 293 218 293 0.88

Sequence Information

Coding Sequence
ATGGCGCGAGACGAAGTGTTAGCGATCAACGACAAGGTCGTGGTCCGTGCAGAGGACCTGCTCTCGTGGATGTGCACGGGTCGGGACTGGACGTACGGGCTGCAGGCCGTGTGGCGCGGGGCGTGCGCGCCCCGCGGCGACGAGCGCCCCTCGGCGCCGCTGCACGCCACCAGGCTCGACTTCTCCGACGTCGACAAGGAGAAGAGCTCCATCGTCACGGACGCAGACAGCCCAGGGGTCGTGGTGTTCTCCTACCCGCGGTACTGCCGGTACCGGGCGCTCCTGTCCCGTCTCGAGGGCATCCAGGCGGCCTGGCTGCGGGACTCGCTCGTCGCGGCGCTGGGCGGGTACTCCGCCCCAACGAAGAACACCAGGATCCTCTACTGCAAGGATACGTTCGAGTACCCCGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTGGCGCCCCGCCTGAAGGGGCGGCCGCGCGGGCGCCGGCGCCGGCCGCCGCGCTCGCGCACACACTCGCCCGAGTCGCGCTCCAGCGAGGACGAGAGGCCCCTGCCGCCTGTCACCCACCATCCGACCCCCCGGCGCCTGTCCCTGCGTAACGGGCTCGAGAAGCGCAGCTCGGACTCGGACCCGGACCGGGAGCTGAACGTGACGGAGGAGGACAAGGCGTTCCTCCGCATGCTACGCCACTTCCACCGGGACAAGGGGCTCAGCTTCACGCAGGCGCTCTCACTCAAACACTTGTCGCTCCGCGCGCTGTACGCGCTGGTGGCGTCGCGCGGCGGGTACGAGGCGGTGTGTCGGCTGCGACTCTGGCGCGCGCTCTTCCACGCCGACCACTCCGCCACGCGCGCCGTCTACGAGAGATTCCTCCTGCCGTTAGAGAACCACGAGCGGCGTAACGGCGTTAAAGCTAACGGCGTTACGGAGCCGGACACCATCACCGTGTGCGACTCCCCCCCGCCGCCGCCGCAGCACAGAGACAGCGAGACCGGTGAAGTTAAAGAAGATATCAACGTAACATCTAAACCGGCAGAGGAATTGAACAGAGAATTCCTCGAGTCTCTACCCAAAGAAGAAAAACCTCTTAAAATCACAGTGAAATCTGTGGACAAGTTAATAGACACGGAGAAGAGGGAGACCGGCTTCGAGAAGAGAGAAAATGAATTGGAGAAAAGGGATATTGTAGCGGAGCAGAGGGATATAGGGGCGGAGAAGAGAGAGTTTGGTAGTAAAGAAGAGAGGAAGGAAGGCTTTTTAAATGAGCTCGCGAATAAACTCAATTTAGGTAACTCGGACACGACGTTCCTGCAAGAGCTCGCGCGGCAGAGTGCGGCGGCCGCGCCGCCCGCGCCGCACGCGCCCGCGCCCCTGCATGCGCACGCGCACACTGAGCAGAAGGGCTCGCGGCCGGCGGGGCGGAGCTCGCTGCGCGCGGTGCGCGTGAAGCCGGCGCGCGCGCACACCGCGCCCAACACCGCGCCCAACACGCCCCCCGTGCCCCCCCTGCGGCCGGACTCGGCGTCCTCCTCCCCCCCCGCGCTGCCCCCCGCGGCGCCCGTCACCAACTTCGGCATCCACCACCCGCCGGCGCACCACGCCGCCAACAGCGACGACGAGATAGTCGAGGTCCCATACAAACCAAAAACACCAGAAATCATCGACCTAGATGAATACCCGGAAAGCCCTCAAGCTGTCAAAAAGAAGAAACTGGACATACTCAAGGAGCGGGGGCTAGAGGTCACGCCACTACCCGCCCCCGGCTGGCCCGGCCCCGGCCTAGCCACGCCCCTCATCGCCCCTAGCCCGATTCTCTTACCAGCTGTTCAACACCAAATAATGACTAACGCGCAACTATTCCAAATGTATAACATAGTCCCACAAAACTACAACGGAATGCAACCTCCAAAAGTGATCCAAGCGAGCCCTCTATACGGGACAACGAGCCCAGAAAAGACCGTATATGGCAACCCTAAAGACCCATTCATGCCCCCTCCACACGTACTCCATGGCGCGCCTATAAAGCCTACCAAAAGTGTTCTACAGGCACCGACTCCTGCGCAAGATATCTTAGACTTGACCTGCAAGTTGAGTAGCAAACCAGCTGTGGAAATCGTCCGCGTTCCCAGCACGCCATCGCCGTCCAAAAATCAGTCAACAGCGCAGAATTTAACCAAAAACTATTCTATCGTAGACGGAAAGGCAGTCGTTGGATCTAATTTAGAAATTACGTTAGTCAATAAAGCGCAGCCCTTGTCGCCTGTAAAGAAGCAGACCCCCCAAAAGAGGTCTTCAAACGGCAAATTTACTAAGACCCCTACTCCGCCGAAGGAATACCCAAAACCATACAAAAAGACCTCTTTAGTTGTCCCTAATTACCAAGTCAGTCGGGAAGATAGCCCTACAAGCTCAACTAGTTCGCAAAGCAGTCAAAAAAATCTAATTCCGACCGCGATTGACCCTAAGGGTCCCGCGACGCAATTCCTAGACCCTTCGAAAGGGCACGCGGCGTCATATTTAGATCCCTCCAAGGGCCCCGTTACATCATTTTTGGACCCCTCCAAGGGGCCTGTAGCGTCATATTTAGACCCCTCCAAGGGGCCCGTGGCGTCATTTTTGGACCCCTCCAAGGGACCTGTGTCGTCATTTTTGGATCCTTACATGGCTTTATATAATTTAGCGGGGCAGATGGATCCCAGACAACTGGCTGCGTATAGGGAAATAATGGCAAACCCTTTTAGATATTCGGGACTCTTGAACATGGGTGTCGGGAACCCTACAACGAAGAATTAG
Protein Sequence
MARDEVLAINDKVVVRAEDLLSWMCTGRDWTYGLQAVWRGACAPRGDERPSAPLHATRLDFSDVDKEKSSIVTDADSPGVVVFSYPRYCRYRALLSRLEGIQAAWLRDSLVAALGGYSAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRPPRSRTHSPESRSSEDERPLPPVTHHPTPRRLSLRNGLEKRSSDSDPDRELNVTEEDKAFLRMLRHFHRDKGLSFTQALSLKHLSLRALYALVASRGGYEAVCRLRLWRALFHADHSATRAVYERFLLPLENHERRNGVKANGVTEPDTITVCDSPPPPPQHRDSETGEVKEDINVTSKPAEELNREFLESLPKEEKPLKITVKSVDKLIDTEKRETGFEKRENELEKRDIVAEQRDIGAEKREFGSKEERKEGFLNELANKLNLGNSDTTFLQELARQSAAAAPPAPHAPAPLHAHAHTEQKGSRPAGRSSLRAVRVKPARAHTAPNTAPNTPPVPPLRPDSASSSPPALPPAAPVTNFGIHHPPAHHAANSDDEIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTPLPAPGWPGPGLATPLIAPSPILLPAVQHQIMTNAQLFQMYNIVPQNYNGMQPPKVIQASPLYGTTSPEKTVYGNPKDPFMPPPHVLHGAPIKPTKSVLQAPTPAQDILDLTCKLSSKPAVEIVRVPSTPSPSKNQSTAQNLTKNYSIVDGKAVVGSNLEITLVNKAQPLSPVKKQTPQKRSSNGKFTKTPTPPKEYPKPYKKTSLVVPNYQVSREDSPTSSTSSQSSQKNLIPTAIDPKGPATQFLDPSKGHAASYLDPSKGPVTSFLDPSKGPVASYLDPSKGPVASFLDPSKGPVSSFLDPYMALYNLAGQMDPRQLAAYREIMANPFRYSGLLNMGVGNPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00205847;
90% Identity
-
80% Identity
-