Basic Information

Gene Symbol
-
Assembly
GCA_964007245.1
Location
OZ023310.1:10905947-10923030[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-12 5.3e-09 37.5 0.0 2 89 217 291 216 291 0.90

Sequence Information

Coding Sequence
ATGTTCACTttgaaaGACGAAGTACTCGCGATCAACGACAAGGTGGTCCTTAAAGCCGAGGACCTCCTCACATGGATGTGTACGGGCCAGGACTGGACGTACGGCCTCAAGGCCGTGTGGCGCGGCGCGTGCGCTCCGCACAACGACGCGCGACCGACTGCGGCTTTGCACAGCACGCGGCTCGACTTTAGTGACGTTGACAAGGAGAAGAGTGCTATTGagatCGACTCCCAAAGCCCAGGCGTGGTGGTGTTCTCGTACCCCCGCTACTGCCGCTACCGGGCGCTCCTGTCCCGTCTCGAGGGCATCCAGGCCGCCTGGCTGCGGGACTCGCTGGTGGCCGCGCTGGGAGGGTACTCCGCCCCCACAGACAACACTAGGATCCTCTACTGCAAGGATACGTTCGAGTACCCAGAGCTAGAGGGCCACGAGTTCGTGTGCAACCACCTAGCCCCCAAGCTGAAGGGGCGCGGGCGCGGTCGCCGGCGCCGCCCCCCGCGCTCCACGCCCCCCCACTCGCCTGACTCGCGCTCCAGCGAGGACGAGCCGAGCCCCCGCCCGACCCCGCGGCGGCTGTCGCTCCGCAACGGGCTGGAGAAGAGGAGCTCAGATTCGGACCCGGACCGGGAAACCAACGTGACGGAGGAAGACCAGGCTTTTCTGCGCATGCTGAGGCGGTTCCACCGGGACAAGGGACTTAGCTTCTCGCAGGCGTTGTCTCTTAAACATTTGTCGTTGCGGGCGCTATACACGCTGGTACTATCCCGCGGTGGCTACGAAGCTGTTTGCCGTTTGCGATTGTGGCGCCCCCTGTTCCACGCGCAACATACGTCCACCAGAGCCATCTATGAAAGattCCTCTTGCCGCTAGAGAACCACGAGCGGCGTAACGGCGTTAAACCTAACGGCGTTACGCCTCTAACGACGGAACCGGACACCATCACCGTGTGCGACTCCCCCCCACCACCTCCACACGAGCACCGCGACAGCGAGACTGGTGAAGTGAAAGAAGATATCACCCTGACTTCGAAACCGGCAGAAGAACTAAACAGAGAATTCCTCGACTCGCTACCGAAAGAAGAAAAACCTGTAAAAATTACCGTTAAACCTGTCGAAAAGCTTATAGACACGGATAAAAGAGATATAGGGATCGAGAAGAGAGAAATTGGGGTGGATAAGAGAGATATTGGAGTGGAGAAGATAGAAATTGGGATAGAGAAAAGGAATTTTGGTGGCGTGGAAGAAAAGAAAGAGGGGTTTCTGAGTGAATTGGCGAATAAGCTCAATTTAGGTAATTCGGACACGACGTTTCTACAAGAGTTGTCTCGACAGAGCTCGGCGCCCCCGCCCCCCGCCGCGACGCACCCCCCCACCCCCACCCCCACCCCGCACTCGCAGCCAAACACTGAACAGAAAAATTCCCGGCCATTGGGGTCCCGGAGCTCGCTGCGCGCGGTGCGAGTCAAACCTGCGCGCGCGCACACCGCGCCCAATACTGCGCCCAACACGCCACCGGTGCCCCCCCTGCGGCCGGACTCGGCGTCGTCCTCGCCCCCCTCGCTGCCCCCCACCAGCACTCCTGCGCCGGTCACCAACTTTGGGATCCATCATCCACCGCCGCAGCaccagaataataataatagcgaTGATGAAATTGTCGAGGTCCCATACAAGCCAAAAACGCCGGAAATCATCGATCTAGACGAGTACCCGGAAAGCCCGCAATCCATCAAAAAGAAGAAACTAGACATACTCAAAGAGAGGGGGTTGGAAGTGACACCCCTCCCCGCGGCCGGCTGGCCCACCCCCCTCATTACACCCACCCCAATACTCCTACCCGCGGTCCAACACCAAATAATGACTAATGCGCAACTATTCCAAATGTACAACATCATCCCCCAAAATTACAACGGCATGCAACCCCCCAAAGTGATACAGGCTACGCCATTTTACGGCACGAGTAGTCCAGAAAAAACTGTCTATGGCAACCCTAAGGATCCCTTTATGCCGCCTCCACACGTTTTACACGGAGCTCCGATAAAGCCTACTAAAAGTGTGTTGCAGCCACCGACCCCTGCGCAAGATATTCTAGACTTAACTTGCAAATTGAGCTCTAAACCCGCAGTAGAAATAGTCCGCGTCCCCACCACTCCCTCCCCCTCCAAAAACCAATCGACAGCTCAAAATCTGACCAAAAACTATTCAATCGTCGATGGAAAAGCTGTCGTTGGATCCAACTTAGAAATAACTCTAGTAAACAAAGCACAACCGTTATCTCCTACAAAGAAACAAGTCGTCCCCCAAAAAAGGTCTTCGAACGGCAAATTCACTAAAACGCCGACCCCCCCTAAGGACTATCCTAAACCGTACCCCAAAAAGAACCCTATAATAGTACCTAACTACCAAGTGAGTCGGGAAGACAGCCCTACTAGCTCCACAAGCTCACAGAATAGTCAAAAGAATATGATTCCAACTGCAATGGATCCTAAAGGTCCGGTTACGCCGTTTTTGGATCCGTCGAAAAGTCACGCCGCGTCGTTTTTGGATCCTTCCAAAGCTCCCGTATCGCCGTTTCTGGATCCTTCTAAGGGTCCGGTAGCGTCGTATTTGGATCCGTCCAAGGGTCCGGTAGCGTCGTTTTTGGATCCGTCCAAGGGTCCAGTCTCGTCGTTTTTGGATCCGTATATGGCGTTATACAATTTGGCGGGGCAGATGGATCCAAGGCAGTTGGCGGCGTATAGGGAAATTATGACGAATCCTTTTAGATATTCGGGACTTTTGAATATGGGTGTTGGTAACCCCACAACGAAGAATTAG
Protein Sequence
MFTLKDEVLAINDKVVLKAEDLLTWMCTGQDWTYGLKAVWRGACAPHNDARPTAALHSTRLDFSDVDKEKSAIEIDSQSPGVVVFSYPRYCRYRALLSRLEGIQAAWLRDSLVAALGGYSAPTDNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRGRGRRRRPPRSTPPHSPDSRSSEDEPSPRPTPRRLSLRNGLEKRSSDSDPDRETNVTEEDQAFLRMLRRFHRDKGLSFSQALSLKHLSLRALYTLVLSRGGYEAVCRLRLWRPLFHAQHTSTRAIYERFLLPLENHERRNGVKPNGVTPLTTEPDTITVCDSPPPPPHEHRDSETGEVKEDITLTSKPAEELNREFLDSLPKEEKPVKITVKPVEKLIDTDKRDIGIEKREIGVDKRDIGVEKIEIGIEKRNFGGVEEKKEGFLSELANKLNLGNSDTTFLQELSRQSSAPPPPAATHPPTPTPTPHSQPNTEQKNSRPLGSRSSLRAVRVKPARAHTAPNTAPNTPPVPPLRPDSASSSPPSLPPTSTPAPVTNFGIHHPPPQHQNNNNSDDEIVEVPYKPKTPEIIDLDEYPESPQSIKKKKLDILKERGLEVTPLPAAGWPTPLITPTPILLPAVQHQIMTNAQLFQMYNIIPQNYNGMQPPKVIQATPFYGTSSPEKTVYGNPKDPFMPPPHVLHGAPIKPTKSVLQPPTPAQDILDLTCKLSSKPAVEIVRVPTTPSPSKNQSTAQNLTKNYSIVDGKAVVGSNLEITLVNKAQPLSPTKKQVVPQKRSSNGKFTKTPTPPKDYPKPYPKKNPIIVPNYQVSREDSPTSSTSSQNSQKNMIPTAMDPKGPVTPFLDPSKSHAASFLDPSKAPVSPFLDPSKGPVASYLDPSKGPVASFLDPSKGPVSSFLDPYMALYNLAGQMDPRQLAAYREIMTNPFRYSGLLNMGVGNPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00205847;
90% Identity
iTF_00826610;
80% Identity
-