Bany003627.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bicyclus anynana
Gene Symbol
-
Assembly
GCA_947172395.1
Location
OX359208.1:2678469-2688987[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 4.5e-05 0.0024 18.4 6.7 1 23 190 212 190 212 0.98
2 28 0.0021 0.12 13.1 1.0 1 20 253 272 253 274 0.96
3 28 0.0016 0.086 13.5 0.3 3 23 307 328 305 328 0.95
4 28 0.0024 0.13 12.9 0.4 1 23 379 401 379 401 0.98
5 28 0.0072 0.39 11.4 0.1 1 23 423 445 423 445 0.96
6 28 0.00021 0.011 16.3 2.6 2 23 497 518 496 518 0.95
7 28 7e-05 0.0038 17.8 2.0 2 23 562 583 562 583 0.98
8 28 0.00053 0.029 15.0 2.2 1 23 633 656 633 656 0.96
9 28 0.00017 0.0094 16.5 0.2 1 23 710 732 710 732 0.97
10 28 0.024 1.3 9.8 5.4 2 23 744 765 743 765 0.96
11 28 0.095 5.2 7.9 1.8 2 23 777 798 776 798 0.96
12 28 0.0025 0.13 12.9 0.7 1 23 808 830 808 830 0.98
13 28 0.39 21 6.0 4.0 1 23 859 881 859 881 0.92
14 28 0.00065 0.035 14.7 2.5 1 23 892 914 892 914 0.98
15 28 0.00022 0.012 16.2 1.3 1 23 922 944 922 944 0.97
16 28 0.00033 0.018 15.7 0.5 2 23 964 986 963 986 0.97
17 28 0.67 36 5.3 1.5 1 23 1004 1026 1004 1026 0.96
18 28 0.11 6.2 7.7 3.7 1 23 1033 1055 1033 1055 0.97
19 28 0.12 6.7 7.5 1.1 2 23 1066 1090 1065 1090 0.94
20 28 0.0021 0.12 13.1 0.2 2 23 1113 1134 1112 1134 0.95
21 28 1.8 99 3.9 0.3 2 20 1138 1156 1137 1157 0.91
22 28 0.0027 0.15 12.8 0.2 2 23 1215 1236 1214 1236 0.95
23 28 0.29 16 6.4 5.0 3 23 1244 1264 1242 1264 0.96
24 28 0.057 3.1 8.6 0.7 2 23 1275 1297 1274 1297 0.94
25 28 0.49 27 5.7 2.6 2 23 1314 1332 1314 1332 0.89
26 28 0.14 7.8 7.4 2.0 2 22 1336 1356 1336 1356 0.94
27 28 0.25 14 6.6 0.4 2 23 1405 1426 1404 1426 0.93
28 28 0.0045 0.24 12.1 0.5 2 23 1437 1459 1436 1459 0.95

Sequence Information

Coding Sequence
ATGGCTCTCAAGCTTGGAAAATGCAGGCTTTGCCTCAAACTGGGCGACTTCTATTCCATCTTTACGGTGGACAACAATATGCAGCTTGCCGAAATGGTTATGGAATGCGCGCGGGTGAAAATATGCGATGGCGACGGACTTCCAGATAAGATTTGCAGCGAATGCATTCAGAAGTTGAGTAGTGCACATATCTTCAAACAGCAGTGCGAGCGCTCTGACCAAGAGCTCAGACGGAACTATGTTCCTCCTCCAGGATTTAGTTCAACCCCGCCGCCTACCAGACAGAGCAGTGACTCTGCATTCTCATCCCAAACTGAAGTTTCGAAGCCATCATCCTCTACCGAGAGTCTAGTCACTCCAGTTAGCCGAACCAGGAAACGCAGTAGGGACAGTATCGACGAAGCGTCTTCCAGCAGTCGCTCCAACTATAAACCGGGAAGCTCGAAAAGAGTCGACGAGCTGCGCACGTCTTTGAAGAAACCAAGAGTCTCACAAACATCAGACTCTGATTATGAAGACAGTAGTCCATTCTATTCAGCGGAAACTGATTCTGATGAACCTCTGCAACACAAATGCAATCAGTGCTCCAAAGCTTTCAGGACATCCAAATCCCTTTGTGCACACATGAAATCTCACAAAAGAAAAATTAACATCTTTAATGCGCAGAACTCGCAAACCGCTACGACCCCTGAAAAGACGCCTAAAAAACAAGAGGACAGCAAAGAAACGAGGGAAGCTAATGAAGAAAAGGCCAAATTTAAGTGTGATAAATGCGGAAACAGTTTCAAATTACAAATAATGCTTAAGAGACATTATGAGTTTTGTGGCAAATCTCCACAAAAGCAGCTTCTGATTTCATTAGAGCCTATAGACATGGCACAAATGCCAACTTCATCAAACCAAAGTCCACAGATAAATTGTGATATGTGCGCTTCTAAATTTAAAACAGTAGACAATCTAGAGAAACATATGAAAATAGTGCACGCTGCTGTGCTAAAAAGAGAAAGAGTTTCAATATCCAATGAAAATGGTTTATTAGGCGTGCCGTGTGTCTATTGCAAAGAACCTTTTCTGGATTATTATCTTCACAGTGGTCACCTTTCTTCGTGTCCTAAAAAGAATGACTCTGTGACATTCGAATGCCCTATGTGCCAAAAGGTCATCAATAAGAAATCGTCATACATCCTTCACGCGAAGATGCACTTTTACCAGTTGGTCTCGGATGCAAAGGCGGAAAAACCTTCTAATAGTACAAATCAGGAGACTTATCAATGTCGCATGTGTACTAAGAAATTACCTTCTCAGGAAGCTCTGATTAGTCACCTGGCTGCACACATGAATAAAGTTGAAGAAGACAATGATGCGGCGGACGACGCTGCAGCCGACGACGATGTAGCGGATGATGATGTTGAATCCAAAGCAAGCACTGCTGGAGATTCAGCATCGGTACACTCGGATTACAATTCCTATACACCCAGCGGGCCTTTAAGTTGCAAGTTCTGTGACAAAAGTTTCAAATACAAAAAGGCGTTGAAGTCGCACGAAGAGAAACACTTGGAAGGCAAAATAAAGATCGAAAAGCCGGACATAAAGCCCAGCGCTCTTTTGAATCAGACTACGAACTCGTACCGTTCAGACGAATCAGAATTGGAATCTAGTCAAGACGAGGCCGATGGAGATAACACCTGTGACATATGCGAGAAGCAGTTCTCTTACAAGCAGCTGTTAATAAAACACAGGAGGAAACACTCTATGACAGCAGGAACGAAGCGAGCGAAGATCAACTTGAAGGACTGTTCGGTCCGCTGCTTGATCTGCGACGTAGAAATGAAAGTCAGCGCCATCAACGAGCACAACCAGAAACACATAACAGCTAACATGAAGCCGCGGAATTTGTACACTTGCAAAGAGTGCAGCGAACAGTTTAAGAGTTGTAGTGGGCTCGCGAATCACATAAAGTTTGTGCACCGGTTGCACCAACCCCCCAATAGTAAAAAGATCGTGGTGCCTGCTGCTGATGTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGACGGAACCCCTGGACTATGTTCAGAGTCACAACGGCTTTGAGGTTTCCGTCGACGCTAGCGTTAACATGAGCGGTTTCACCTGCCCCGTGTGCAACAAGACCTTGCCCACGTTGATCTCCCTCAAGAGACACGTCAATTGGCACAAGAATGTCGGGAATAACATTGAGAAGAAATTGGAATGCTTCGTTTGTAAAGAGATATTCCGATTCCAGTGTCATTACAAAATTCATATGCGCCAACATTACAAGGATCCCAACATAGATCCGAAGCTGCTCACGTGCTCCATCTGCAACCGCAAGAGCAAGCACCTCCGCGCCGCGCAGGCGCACATGAACTTCCACAAGCAGACGCGATTTAAGAACAAAGACTACGAGTGCTCTATTTGCAAAAAGGTCTTCCAGTACCGCAAAGTCTATCTCTCCCACATGGCCATCCACTTCAAGCGCGGCGAGAGCGCCGCCACCGCCGTCGTGGGCACCGTCGCGCCCTTGTCGCTCGACAAGAGCAAGTTCGACGGCACCTACACTTGCCAACTCTGCGGCAAAGTTTGCGATTCGGAAAACTCTCTCAAATGCCACACGAGCTGGCACAACTCGAAGACTCTACTGTATGGAGCGCGACACGAGTGCGAAATCTGCAACGTGCAGTTCACTAACAAAAGGCGGCTCGAGCTTCACACGAGAACACATTTCGAGGACGACAATGGACCTTTCAAATGCCATATATGCGGAAAAGGCTACATTGTCGAGGATTACTACAAGAGACACGTCAAAGGACACAACTTCGACCACCAGTCTCACAAGAAGCGCATAGAGAAACTCCGAAAGGATAAAGTGAAATGTCCCATTTGCGAGAGATACTACCCAGATTTGATCCATCTCATCAGACATCTGCGTCGCACGCACCCCGAAAGCAAAATGATCAAGGAAGACCCCGACGCCCCGCCTCCCATCTACTACTCGTGTAAACTGTGCGCCAAGGTTTTCTTGGATGAGCGGAGATTGCAACATCACGAGGAATCTCATTTGAGGAAACCGGAATTTTTCAAATGCAAATTTTGCGGAAAGAAAACAATCTCGCTCAAAAATCACAGGGTTCATATCAAAGGTCATTTGACTCAAAAATATATTGACGAACCCCTGAAGTGTACCCAAAAAGACTGCTCCGAGACTTTCGGCCGGGGCTACGACTTGCACTACCATCTGCGCGACGCGCACGGCATCACCGAAACTTGGATCGCAGAGCGCGGCCCGCGAGTGCCCGACGGGCCGCTCAAGGAGCTGCAGTGCTCCATATGCTTCAAAGTACTCGCCAGCAGAGGCAACTACGAGCGCCACATTGACTACCACAACTCTCTGAGATGCAACTATTGTTTCGAATACTTCACAGGCTCACAGTTTCTCGAAGGACATTTGACGTTCAGCTGCGAGAGGAAGAAATTGCTCGGTGACACTGAAATTTACCCAAAGAAAGTGAAGTGCCATATATGTTACAAAGCTTTCCACTTGCAAGTGAAGTTGGACTGTCACTTGCGCACCAAGCACGATATTAAAACGTTCAAAGAAGCTTCCGAGGGCAAAAAGGAGATAGTGTGCGATTATTGCTTCAAAGTGTTCGAAAACGAGTACGCTCTCAGCACCCACAAGATCTATCACCGCACCATCGGCTACTACGGCTGCATGTACTGCAACAGGAAGTTCAACACGATGACTCTGTACCGCAAACACAAGAACCACCACTTCGCCCAGCTCAACGTCGACAACCCGACGAAATGTGAACATTGCGACGAAACATTTGTCGCGTTCCGGGAAATGATATACCACTTGAGAGACGTTCACGGCGATGAGAAGGAATGGATCGTGCTACCCAAGGAATCCATTGAAGAGAAATGTCCTATCTGCAACAAAATTTTCTTCAATCTCCACAGACATTTGGATTACCACGAAGAAAACAGATGCAAGAAATGTGGCGAATACTTCTTCTCGCAAGTGGATTTCGACAACCATTTGTGTACGGTCGACAGCGACGAAGAAGTCACCGAAGCCAATACCAACGGCGTGCGGACCGTTTATGAGGAGTGCGTCTTCTGCTTCAAACCATTAACTAAAAAGAATTCGAAGAAGAAACACGATTTGATCCACAAGGGTTCAGGGTCTATATCGTGTCGATTCTGTCCTCTCAAATTCAAGACTATAGACGCGTTTAACATTCACGCCTTTTCTCATCGTAGCAGAAAGTACAAGAAGAAACCGATCAAGTGTCGGAAATGCGGGGAGAAGTTTGTGAAATACGGGCCGTTCATGAAACACATGAAAGGCGTCCACAAGTCGAACAAGAAGATTCACTACAGAGCGACCGTCATGCCGGAGGAATGCGTCGTGTGCCACGGAAGCTTCCCGAATCTGCACAACCACTATCGCGCGCATTTGCAGAACCAGTGTCTGCAATGTTTAAAGTATTTCACCTCCTGTAAAGTATTTTCCATGCACCAATGTGACAAAGAAGACTCGAATCCGGATAAAGTGTTCACGTGTGACGAAGACTTGTTGCATCTGATCAACACGTACGTTCCTAAAGACGAGAAAGACGACGAGAAGTATTACGGTTACGAGGGAGAAGAGGACGATGACGTCGACATAGAAACAGTGGACGAATCCGTCCCGTTCACATCTCTGGAACAAAAGCACGAACCAGATATTGCGTCACAGGACGAGGACAGCCAAAACTCCATAGACATTGAAGAGCAAAACCTACACGAAATGGTTCACGCACCCATAATATCTGATGTTCTTTCACTGTTTAAACAGAAAGAGGATAAAAACGACTCAGACGATGATGTTGTGGTTTTGACGGACGAAGATTCTGTTGGTTTCGAGGACAACATTTTGACAGTTATAACTATAGAGGATGATTGA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNNMQLAEMVMECARVKICDGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSSTPPPTRQSSDSAFSSQTEVSKPSSSTESLVTPVSRTRKRSRDSIDEASSSSRSNYKPGSSKRVDELRTSLKKPRVSQTSDSDYEDSSPFYSAETDSDEPLQHKCNQCSKAFRTSKSLCAHMKSHKRKINIFNAQNSQTATTPEKTPKKQEDSKETREANEEKAKFKCDKCGNSFKLQIMLKRHYEFCGKSPQKQLLISLEPIDMAQMPTSSNQSPQINCDMCASKFKTVDNLEKHMKIVHAAVLKRERVSISNENGLLGVPCVYCKEPFLDYYLHSGHLSSCPKKNDSVTFECPMCQKVINKKSSYILHAKMHFYQLVSDAKAEKPSNSTNQETYQCRMCTKKLPSQEALISHLAAHMNKVEEDNDAADDAAADDDVADDDVESKASTAGDSASVHSDYNSYTPSGPLSCKFCDKSFKYKKALKSHEEKHLEGKIKIEKPDIKPSALLNQTTNSYRSDESELESSQDEADGDNTCDICEKQFSYKQLLIKHRRKHSMTAGTKRAKINLKDCSVRCLICDVEMKVSAINEHNQKHITANMKPRNLYTCKECSEQFKSCSGLANHIKFVHRLHQPPNSKKIVVPAADVADFCEVVVTKTEPLDYVQSHNGFEVSVDASVNMSGFTCPVCNKTLPTLISLKRHVNWHKNVGNNIEKKLECFVCKEIFRFQCHYKIHMRQHYKDPNIDPKLLTCSICNRKSKHLRAAQAHMNFHKQTRFKNKDYECSICKKVFQYRKVYLSHMAIHFKRGESAATAVVGTVAPLSLDKSKFDGTYTCQLCGKVCDSENSLKCHTSWHNSKTLLYGARHECEICNVQFTNKRRLELHTRTHFEDDNGPFKCHICGKGYIVEDYYKRHVKGHNFDHQSHKKRIEKLRKDKVKCPICERYYPDLIHLIRHLRRTHPESKMIKEDPDAPPPIYYSCKLCAKVFLDERRLQHHEESHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDEPLKCTQKDCSETFGRGYDLHYHLRDAHGITETWIAERGPRVPDGPLKELQCSICFKVLASRGNYERHIDYHNSLRCNYCFEYFTGSQFLEGHLTFSCERKKLLGDTEIYPKKVKCHICYKAFHLQVKLDCHLRTKHDIKTFKEASEGKKEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCMYCNRKFNTMTLYRKHKNHHFAQLNVDNPTKCEHCDETFVAFREMIYHLRDVHGDEKEWIVLPKESIEEKCPICNKIFFNLHRHLDYHEENRCKKCGEYFFSQVDFDNHLCTVDSDEEVTEANTNGVRTVYEECVFCFKPLTKKNSKKKHDLIHKGSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYKKKPIKCRKCGEKFVKYGPFMKHMKGVHKSNKKIHYRATVMPEECVVCHGSFPNLHNHYRAHLQNQCLQCLKYFTSCKVFSMHQCDKEDSNPDKVFTCDEDLLHLINTYVPKDEKDDEKYYGYEGEEDDDVDIETVDESVPFTSLEQKHEPDIASQDEDSQNSIDIEEQNLHEMVHAPIISDVLSLFKQKEDKNDSDDDVVVLTDEDSVGFEDNILTVITIEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01021523; iTF_01151412;
90% Identity
-
80% Identity
-