Mmin003550.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Mycalesis mineus
Gene Symbol
-
Assembly
GCA_034621355.1
Location
CM067884.1:2957172-2967350[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 6e-05 0.0042 18.2 5.7 1 23 190 212 190 212 0.98
2 28 0.0051 0.35 12.1 0.5 1 20 253 272 253 274 0.95
3 28 0.00083 0.058 14.6 0.2 3 23 308 329 306 329 0.95
4 28 0.039 2.7 9.3 0.1 1 23 380 402 380 402 0.98
5 28 0.0085 0.59 11.4 0.1 1 23 430 452 430 452 0.96
6 28 0.0001 0.007 17.5 1.5 2 23 518 539 517 539 0.96
7 28 0.00017 0.012 16.8 2.1 2 23 583 604 583 604 0.98
8 28 5.3e-05 0.0036 18.4 1.6 1 23 654 677 654 677 0.96
9 28 0.0003 0.021 16.0 0.2 1 23 731 753 731 753 0.97
10 28 0.0096 0.66 11.2 5.4 2 23 765 786 764 786 0.96
11 28 0.11 7.7 7.9 1.8 2 23 798 819 797 819 0.96
12 28 0.0029 0.2 12.9 0.7 1 23 829 851 829 851 0.98
13 28 3.4 2.4e+02 3.2 5.7 1 23 880 902 880 902 0.92
14 28 0.0012 0.082 14.1 2.2 1 23 913 935 913 935 0.98
15 28 0.00015 0.01 16.9 1.5 1 23 943 965 943 965 0.98
16 28 0.00018 0.013 16.7 0.5 2 23 985 1007 984 1007 0.97
17 28 0.78 54 5.2 1.5 1 23 1025 1047 1025 1047 0.96
18 28 0.13 8.6 7.7 3.6 1 23 1054 1076 1054 1076 0.97
19 28 0.11 7.6 7.9 0.7 2 23 1087 1111 1086 1111 0.94
20 28 0.0024 0.16 13.2 0.2 2 23 1134 1155 1133 1155 0.95
21 28 2.1 1.5e+02 3.9 0.3 2 20 1159 1177 1158 1178 0.91
22 28 0.0032 0.22 12.8 0.2 2 23 1236 1257 1235 1257 0.95
23 28 2.3 1.6e+02 3.8 4.2 5 23 1267 1285 1264 1285 0.94
24 28 0.02 1.4 10.2 0.9 2 23 1296 1318 1295 1318 0.95
25 28 0.2 14 7.1 2.6 2 23 1335 1353 1335 1353 0.89
26 28 0.79 55 5.2 2.3 2 22 1357 1377 1357 1377 0.93
27 28 0.29 20 6.6 0.4 2 23 1426 1447 1425 1447 0.93
28 28 0.024 1.7 10.0 1.0 2 23 1458 1480 1457 1480 0.95

Sequence Information

Coding Sequence
ATGGCACTCAAGCTTGGAAAATGCAGGCTTTGCCTCAAACTGGGCGACTTCTATTCCATCTTCACGGTGGACAACAACATGCAGCTCGCCGAAATGGTTATGGAATGTGCACGAGTGAAAATACATGATGGCGACGGACTTCCGGATAAAATTTGCAGCGAATGTATACAGAAGCTGAGCAGTGCACATATCTTCAAACAGCAGTGCGAGCGCTCCGACCAAGAGCTCAGACGGAACTATGTCCCTCCTCCAGGATTTAGTCCAACACCCCCACCAATCAGACAAAGCAGTGACTCAGCATTTTCTTCACACACTGAAGTTTCTAAGCCATCATCTTCTACCGAGAGCCAAGTCACTCCAGTTAGTCGAACCAGAAAACGGAGTAGAGACAGTATCGACGAAGCGTCTTCAAGCAGTCGCTCCAATTACAAGCCTGGAAGCTCGAAAAGAGTCGACGAACTTCGCATGTCTTTAAAGAAACCACGAGTTTCCCAAACTTCAGACTCTGATTATGAAGATAATAGCTCTTTCTATGCGGCGGAAACTGACTCCGATGAACCTTTACAACACAAATGCAGTCAGTGCTCCAAAGCATTTAGGACTGCCAAATCTTTATGTGCTCATATGAAATcacataaaagaaaatataatatccaAAATGCGCAAAACTCTTCAACAGTTACGACCCCTGAAAAGACGCCCAAGAAACCAGAGGAGAGCAAGGAAACTAGGGAAGATAATGAAGAAAAGGCCAAATTCAAATGTGATAAATGCGGGAACAATTTTAAATTGCAGATCATGCTCAAGAGACATTATGAGGTATGCGCCAAGTCGCCGCAAAAGCAGCTTCTGATTTCATTAGAACCTATAGACAGTCTGATGCCAATACATACGCCGTCAAACGAAACTGCGAAGATAAATTGTGACATGTGCGCTTCTAAGTTTAAAACAGTAGACAATCTAGAGAAACATATGAGAATAGTGCACGCGGCTGTTCTTAAAAGAGAAAGAGTTTCAATATCAAATGAAAATGGAGTGTTAGGCGTGCCCTGTGTCTATTGCAAAGAACCTTATCTGGATTACTATCTTCACAGCGGTCACCTTTCTTCATGTCCCAAAAAGACAGACGCCGTGACATTCGAATGCCCAATCTGTCTAAAGGTAATAAACAAGAAAGCGTCGTACATCCTCCACGCGAAGATGCACTTTTACCAGTTGACTTCCAACGCGACGCCCGTGACGCGTGCGACGCCGGCGAAGCCTTCCACTAGCACAAATCAGGAGACCTATCAATGTCGTATGTGCACTAAGAAATTACCTTCTCAGGAAGCTCTGATCAGTCACTTGGCCGCACATATGAATAAAGTTGAAGAAAACGATGATCCCCCGGATGACGATTTCCCGGATGATGATCTACCGGATGATGGCATAGCGGATGATGACGCAGCGGATTATGGTGCAGTGGATGATAATGAATCCagAGCAAGCACTGCAGCAGATTCAGCGTCCGTACACTCAGACTACACTTCCCATATAACCAGTGGCCCTTTGAGATGTAAGATCTGCGACAAGGGTTTCAAATACAAGAAGGCGTTGAAGTCGCACGAAGAGAAACATTTGGAAGCCAAAGTTAAGGTCGAAAAACCAGACGTAAAGCCCGGAAACTTTTTAAACCGAACTTCAAACTCGTATCGTTCGGACGAATCGGAACAGGAATCTAGTCCAGACGAAGGCGACGGAGATAACACATGTGACATATGTGAAAAGCAGTTCTCTTACAAGCAGCTGCTAATAAAACACAAGAGGAAACACACCATGACGGCTAAGACGAAGCGAGCGAAGATCAACTTGAAGGACTGCCTGGTCCGCTGCTTGATCTGCGACGTGGAGATGAAAGTGAGCGCCATCAACGAGCACAACCAGAAGCACATAACGGCGAACATGAAGCCGCGGAACTTGTACACTTGCAAAGAGTGCGGCGAACAGTTTAAGAGTTGTAGTGGGCTCGCGAATCACATCAAGTTCGTGCACCGGTTGCACCAGCCGCCCAATAGCAAGAAGATTGTTGTGCCTGCAGCGGATGTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCCCTGGACGATATCCAGAGTCACAACGGCTTTGAGGTTTCCGTCGACGCTACTGTGAACATGAGCGGTTTCACCTGCCCCGTGTGCAGCAAGACGCTGCCCACGCTCGTCTCCCTCAAGCGGCACGTCAACTGGCACAAGAATGTCGGGAATAACATCGAAAAGAAGTTGGAATGCTTTGTTTGTAAAGAGGTATTCCGATTCCAGTGTCATTACAAAATTCATATGCGGCAACATTACAACGACCCCAACCTGGACCCGAAGCTGCTGACGTGTTCCATCTGCAACCGCAAGAGCAAGCACCTGCGCGCCGCGCAGGCGCACATGAACTTCCACAAGCAGACGCGGTTCAAGAACAAAGACTACGAGTGCTCTATTTGCAAAAAGGTCTTCCAATACCGCAAAGTGTATCTCTCTCACATGGCCATACACTTCAAACGCGGCGAGAGCGCCGCCACCGCCGTCGTGGGCAGCGTCGCGCCGCTGTCGCTCGACAAGAGCAAGTTCGACGGCACCCACACTTGCCAACTCTGCGGCAAAGTTTGCGATTCCGAAAACTCCCTCAAATGCCACACGAGCTGGCACAACTCGAAAACTTTGCTGTACGGAGCGCGGCACGAGTGCGAAATCTGCAACGTGCAGTTCACTAACAAGAGGAGGCTCGAGCTTCACACGAGAATGCACTTCGAGGACGACAACGGGCCTTTCAAATGCCACATATGCGGAAAGGGCTACATCGTCGAGGATTACTATAAGAGACACCTCAAAGGACACAACTTCGATCACCAGTCTCACAAGAAGCGCATCGAGAAACTCCGAAAAGATAAAGTGAAATGTCCCATCTGCGAAAGATTCTACCCCGATCTGATCCATCTCATCAGACATTTGCGGCGAACGCACCCCGAGAGCAAAATGATCAAGGAAGACCCGGACGCCCCGCCACCCATCTACTACTCGTGCAAACTGTGCGCCAAGGTTTTCCTAGACGAGCGCAGATTGCAACATCACGAAGAATCTCACCTGAGAAAACCCGAATTTTTCAAATGCAAATTTTGCGGAAAGAAAACTATTTCGCTCAAAAATCATAGAGTTCATATTAAAGCCCACTTGACTCAGAAATATATCGACGAGCCTTTGAAGTGTACCCAGGACGACTGCTCGGAGACTTTCGGCCGCGGCTACGACTTGCACTACCACTTGCGCGACGCGCACGGCATCACCGAGACTTGGATCGCAGAGCGCGGCCCGTGCGTGCCCGACGGCCCGCTCAAGGAGCTGCAGTGCTCCATATGCTACAAAGTGCTGGCCAGCAGAGGCAACTACGAGCGGCACATCGACTACCACAACTCGCTCAGATGCAATTATTGCTTCGAGTACTTCACGGGCAGCCAGTTTCTGGAAGGCCATCTGACGTTCAGCTGCGAGAAAAAGAAGTTACTCGGTGATACTGAAATTTACCCAAAGAAAGTGAAGTGCCATATATGTTACAAAGCTTTCCACTTGCAAGTGAAGTTGGACTGTCACTTGGGCACCCAGCACAACATTAAAACGTTCAAAGAAGCTTCCGAGGGCAAGAAGGAGATAGTGTGCGACTATTGTTTCAAAGTTTTCGAAAACGAGTACGCCCTCAGCACACATAAGATCTACCACCGCACCGTCGGCTACTACGGCTGCATATACTGCAATAGGAAGTTCAATACGATGACTCTGTACCGTAAACACAAGAACCACCACTTCTCCCAGCTCAACGTCGACAATCCGACGAAATGTGAACACTGCGACGAAACGTTTGTCGCGTTCCGGGAAATGATATACCACATGAGAGACGATCACGGCGACAACAAGGAGTGGATCGTGTTACCCAAGGAGTCCGTCGAAGAGAAATGTCCCATCTGCAACAAAGTTTTCTTCAATCTTCATAGACATTTGGATTATCACGAAGAAAATAGATGCAAGAAATGTGGTGAATACTTCTTTTCGCAACTCGATTTTGACAACCATTTGTGTACGATCGACAGCGACGAAGAAGTCACCGAAGCCAACACTAACGGCGTACGGGCCGTGTACGAGGAGTGCGCCTTCTGCTTCAAACCTTTAACGAAAAAGAGTTCGAAGAAGAAACACGACATCATCCACAGAGGTTCGGGATCTATATCGTGTCGTTTCTGCCCTCTCAAATTTAAGACCATAGACGCGTTCAACATTCACGCATTCTCCCACCGAAGCAGAAAGTACAACAAGAAGCCAATCAAGTGTCGCAAATGCAAGGAGAAGTTTGTGAAGTACGGCCCCTTCATGAGGCACATGAAAGGAGTCCACAAGTCGAACAAGAAGCTCCACTACCGAGCGACCGTCATGCCGGAGGAGTGCGTCGTGTGCCACGAAAACTTTCCCAACTTGCACAATCACTACCGAGCGCATTTACAAAACCAGTGTCAGCAATGCTTGAAGTATTTCACCTCACACAAAGTGTTCTCCGCGCACGAATGTGACAGAGAGGACTCGAATCCTGACAAAGTGTTCACGTGCCACGAAAACTTGTTACACTTGATCAACACGTACGTGCCTAAAGACGAGAAAGACGATGAAAAGTATTACGGGTATGAGGGAGAGGAGGATAATGACGAAGAAGATGAAGAAGACGTGGAGACGGTCGACAAACGCGTCACCATCACGCCTCTGGATCAAAAGCACGAGCCTGATTTTATGTCGCAAGACGAGGACAGCCAGAACTCTATAGACATTGACGAGCAGAACGTCCACGAAATGGTTCACGCGCCCATCATATCCGATGTTCTTTCATTATTTAATCAGAAAAATGATAAAACCGATTCTAATGACAGTGTTGTGGTGTTGACGGACGAAGATTCAGTTGGTTTTGAAGATAACATCCTCACTGTTATCACCATAGAAGACGATTGA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNNMQLAEMVMECARVKIHDGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSPTPPPIRQSSDSAFSSHTEVSKPSSSTESQVTPVSRTRKRSRDSIDEASSSSRSNYKPGSSKRVDELRMSLKKPRVSQTSDSDYEDNSSFYAAETDSDEPLQHKCSQCSKAFRTAKSLCAHMKSHKRKYNIQNAQNSSTVTTPEKTPKKPEESKETREDNEEKAKFKCDKCGNNFKLQIMLKRHYEVCAKSPQKQLLISLEPIDSLMPIHTPSNETAKINCDMCASKFKTVDNLEKHMRIVHAAVLKRERVSISNENGVLGVPCVYCKEPYLDYYLHSGHLSSCPKKTDAVTFECPICLKVINKKASYILHAKMHFYQLTSNATPVTRATPAKPSTSTNQETYQCRMCTKKLPSQEALISHLAAHMNKVEENDDPPDDDFPDDDLPDDGIADDDAADYGAVDDNESRASTAADSASVHSDYTSHITSGPLRCKICDKGFKYKKALKSHEEKHLEAKVKVEKPDVKPGNFLNRTSNSYRSDESEQESSPDEGDGDNTCDICEKQFSYKQLLIKHKRKHTMTAKTKRAKINLKDCLVRCLICDVEMKVSAINEHNQKHITANMKPRNLYTCKECGEQFKSCSGLANHIKFVHRLHQPPNSKKIVVPAADVADFCEVVVTKAEPLDDIQSHNGFEVSVDATVNMSGFTCPVCSKTLPTLVSLKRHVNWHKNVGNNIEKKLECFVCKEVFRFQCHYKIHMRQHYNDPNLDPKLLTCSICNRKSKHLRAAQAHMNFHKQTRFKNKDYECSICKKVFQYRKVYLSHMAIHFKRGESAATAVVGSVAPLSLDKSKFDGTHTCQLCGKVCDSENSLKCHTSWHNSKTLLYGARHECEICNVQFTNKRRLELHTRMHFEDDNGPFKCHICGKGYIVEDYYKRHLKGHNFDHQSHKKRIEKLRKDKVKCPICERFYPDLIHLIRHLRRTHPESKMIKEDPDAPPPIYYSCKLCAKVFLDERRLQHHEESHLRKPEFFKCKFCGKKTISLKNHRVHIKAHLTQKYIDEPLKCTQDDCSETFGRGYDLHYHLRDAHGITETWIAERGPCVPDGPLKELQCSICYKVLASRGNYERHIDYHNSLRCNYCFEYFTGSQFLEGHLTFSCEKKKLLGDTEIYPKKVKCHICYKAFHLQVKLDCHLGTQHNIKTFKEASEGKKEIVCDYCFKVFENEYALSTHKIYHRTVGYYGCIYCNRKFNTMTLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDDHGDNKEWIVLPKESVEEKCPICNKVFFNLHRHLDYHEENRCKKCGEYFFSQLDFDNHLCTIDSDEEVTEANTNGVRAVYEECAFCFKPLTKKSSKKKHDIIHRGSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYNKKPIKCRKCKEKFVKYGPFMRHMKGVHKSNKKLHYRATVMPEECVVCHENFPNLHNHYRAHLQNQCQQCLKYFTSHKVFSAHECDREDSNPDKVFTCHENLLHLINTYVPKDEKDDEKYYGYEGEEDNDEEDEEDVETVDKRVTITPLDQKHEPDFMSQDEDSQNSIDIDEQNVHEMVHAPIISDVLSLFNQKNDKTDSNDSVVVLTDEDSVGFEDNILTVITIEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00205388;
90% Identity
-
80% Identity
-