Paeg004798.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pararge aegeria
Gene Symbol
-
Assembly
GCA_905163445.1
Location
NC:17632834-17655145[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.00023 0.0096 15.9 3.1 1 23 191 213 191 213 0.98
2 30 0.083 3.4 7.9 0.9 1 20 252 271 252 273 0.94
3 30 1.7e-05 0.00069 19.5 0.5 3 23 304 325 302 325 0.96
4 30 0.0045 0.18 11.9 0.2 1 23 376 398 376 398 0.98
5 30 0.0038 0.16 12.1 0.2 1 23 423 445 423 445 0.96
6 30 0.00017 0.0069 16.4 3.1 2 23 489 510 488 510 0.95
7 30 0.00011 0.0045 17.0 2.3 2 23 554 576 554 576 0.97
8 30 1.6e-05 0.00067 19.6 1.0 1 23 626 649 626 649 0.97
9 30 0.00015 0.0061 16.5 0.2 1 23 703 725 703 725 0.97
10 30 0.021 0.84 9.8 5.4 2 23 737 758 736 758 0.96
11 30 0.039 1.6 8.9 1.7 2 23 770 791 769 791 0.96
12 30 0.0049 0.2 11.8 0.7 1 23 801 823 801 823 0.98
13 30 2 82 3.6 6.8 1 23 852 874 852 874 0.91
14 30 0.00039 0.016 15.2 2.8 1 23 885 907 885 907 0.98
15 30 2.2e-05 0.00092 19.1 1.4 1 23 915 937 915 937 0.98
16 30 0.00016 0.0064 16.5 0.4 2 23 957 979 956 979 0.97
17 30 0.92 38 4.6 0.9 1 23 997 1019 997 1019 0.91
18 30 0.12 4.8 7.4 3.7 1 23 1026 1048 1026 1048 0.97
19 30 0.033 1.3 9.2 0.4 2 23 1059 1083 1058 1083 0.94
20 30 0.0018 0.075 13.1 0.2 2 23 1106 1127 1105 1127 0.95
21 30 8.8 3.6e+02 1.5 0.6 2 20 1131 1149 1130 1150 0.86
22 30 8 3.3e+02 1.7 5.9 2 23 1170 1192 1169 1192 0.94
23 30 0.0023 0.095 12.8 0.2 2 23 1208 1229 1207 1229 0.95
24 30 1.7 68 3.8 4.2 5 23 1239 1257 1236 1257 0.94
25 30 0.014 0.56 10.4 0.8 2 23 1268 1290 1267 1290 0.95
26 30 0.54 22 5.3 3.9 2 23 1307 1325 1307 1325 0.94
27 30 0.89 37 4.7 1.4 2 20 1329 1347 1329 1349 0.91
28 30 9.5 3.9e+02 1.4 1.2 2 19 1370 1387 1370 1391 0.89
29 30 2.1 84 3.5 0.4 2 23 1398 1419 1397 1419 0.93
30 30 0.0048 0.2 11.8 0.6 2 23 1430 1452 1429 1452 0.95

Sequence Information

Coding Sequence
ATGGCTCTCAAGCTTGGAAAATGCAGGCTATGCCTCAAACTGGGTGACTTCTATTCCATCTTTACGGTGGACAACAATATGCAGCTCGCCGAAATGGTTATGGAATGTGCGCGGGTGAAGatATACGATGGGGACGGGTTACCGGATAAAATTTGCAGCGAATGTATACAAAAGCTGAGTAGCGCGCACATCTTCAAGCAGCAGTGCGAACGGTCCGATCAAGAATTGAGGCGAAACTATGTTCCGCCACCAGGTTTCAGTCCTACCCCGCCCCCAAACAGACAGAGCAGCGACTCGGCATTCTCATCTCACACTGAAGTTTCCAAGCCATCCTCTTCCACTGAGAGTCAAGTCACTCCCGTCAGTCGAACTAGAAAGCGGAGTAGAGACAGTGTCGATGAAGCGTCTACCAGCAGTCGCTCGAACTACAAACCGGGTAGCTCAAAGAGAGTCGATGAACTGCGCATGTCCAAAAAGAAACCTAGAGTTTCGCAAACGTCAGACTCCGATTACGAAGATAACAGCGCCTCCTTCTATTCAGCAGAGACAGACTCCGACGAACCCTTGCAACATAAATGCAACCAGTGCGCCAAATCTTTCAGGTCCGGCAAAAGCTTGAGTGCACATATGAAATCACATAAGAGAAAATGCAACCTAATCCTAAACGCTCAGAACTCTCAGAGCGTTACACCCGAGAAGTGGCCGAAGAAGCCGGAGCAGATCACGAAAGTACCGGAAGATGAAAAGGCTAAATTCCACTGTGACAAATGCGggaacaattataaattgcaaataatgCTCAAGCGTCACTACGAGGTATGCGGGAAATCACCTCAAAAGGAGCTCCTGGTTTCACTAGAGCCAATAGACATGGTGCAACACGCTGCGAAGCTGTCCGCGAAGATAGATTGCGAAATGTGCACCACAAAGTTTAAAACAATGGACAATCTAGAGAAACACATGAGAATTGTGCACGCGGCCGTCCTGAAGAGAGAGCGAGTTTCAATATCCAACGAGAATGGAGTGATCGGCGTGCCTTGCGTCTATTGCAAGGAACCTTTTCAAGATTATTACGTGCACAGCGCTCATTTATCTACGTGCCCTAAAAAGAACGACGCAGTGACGTTTGAATGTCCGATGTGCAAAAAGGTCATAGCAAAGAAAGCGTCCTACACCCTACACGCTAAGATGCATTTTTTTCAGTTAGCAGCTTCAAATGATGAGCAGCCTTCCACTACTACTGTTAATAGTACTGAACGGGAAAATTTTCAATGTCGCATGTGTACTAAGAAGTTGCCCACCCAGGAATCGTTGATCAGTCATCTCGCGGCACATATGAATAAAGTTGAAGCGGACGACGATGAAGACGTCGGTATAGATGACGATGACTCgagAGCAAGCACCGCAGACGACTCCGCGTCCATCCAATCGGACTTCACGTCCTATATAACCAGCGGACCGCTGAAATGTAAATTTTGCGACAAaagtttcaaatacaaaaagGCATTGAAGTCGCACGAAGATAGACACGCTGAGGGTGATATAAAGATTGAGAAGCCCGATAGAAATACCAATCACCTTATGAATATGAGCAACAACACGTATCGCTCCGACGAGTCGGGCGCGGATTCTAGTCAAGACGAAGGCGAAGAGGACAACACATGTGATATATGCGAGAAGCAGTTTTCCTACAAGCGTCTCCTAATAAAACACAAGAGGACGAAACACTGTATGACGGCTGGTACGAAGCGGGCGAAGATTAACCTAAAAGACTGCTCAGTGCGCTGTCTGATATGCGACATAGAAATGAAAGTGAGCGCGATCAATGAACACAATCAGAAGCATATAACGGCTAACATTAGGCCGAGGAATTTGTACACTTGCAAGGAGTGCGGCGAACAGTTTAAGAGTTGTAGTGGGCTCGCGAACCACATCAAACTTGTGCACAGGTTGCATCAACCCCCCACTAATAAGAAGATCGTTGTACCGTCAGCGGATGTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGgCGGAACCCCTGGACGAACTCCAGAGTCACAACGGCTTTGAGGTTTCCGTCGACACTACGGTCAACATGAGCGGCTTTACTTGCCCTGTGTGCAACAAGACACTACCTACCTTGATCTCTCTCAAGAGACACGTCAATTGGCACAAGAATGTCGGGAATAACATCGAAAAGAAGTTGGAATGCTTCGTTTGCAAAGAGATCTTTCGTTTCCAGTGTCACTACAAGATTCACATGCGTCAGCATTACAAGGATCCGAACCTAGATCCGAAATTGCTCACTTGCTCCATCTGCAACCGCAAAAGCAAGCACCTCCGAGCTGCGCAGGCGCATATGAACTACCACAAGCAGACGCGATTCAAGAACAAGGACTACGAATGTTCGATTTGCAAAAGGGTCTTCCAGTATCGGAAAGTGTACCTCTCTCACATGGCCATCCACTTCAAGCGAGGGGAGAGCGCCGCTACCGCAGTCGTGGGCGACGCGCTCCCGCTTTCAGTGGACAAGAGCAAGTTTGACGGCACGCACACGTGCCACCTCTGCGGAAAAGTGTGCGACTCTGAAAACTCTCTGAAATGCCACGTAAGCTGGCACAACTCGAAAACATTACTGTACGGGGCGCGGCACACTTGCGAAATCTGTAACGTACAGTTCACTAACAAAAGAAGACTCGAGATTCATACGAGAACGCACTTCGAAGACGAGAATGGACCTTACAAATGCCATATTTGCGGAAAAGGCTTCATAGTCGAGGACTACTTCAAAAGGCACGTGAAAGGTCATAACTTCGATCATCAGTCTCATAAGAAGCGCATCGAGAAACTCCGAAAGGATAAAGTGAAATGTCCCATCTGCGAGAGATACTACCCAGATTTAGTCCATCTCATCCGGCATCTGCGGCGGACGCATCCGGAAAGCAAAATGATCAAGGAAGATCCCGACGCCCCGCCTCCCATCTATTACTCGTGTAAACTGTGCGCCAAGGTTTTCTTAGACGAGCGCAGATTGCAGCACCACGAGGAAGCTCATCTGAGGAAACCGGAGTTTTTCAAGTGCAAATTCTGCGGAAAGAAAACTATCTCGCTCAAGAATCACAGGATTCATATAAAGGGTCACTTGACCCAAAAGTATATAGATGAGCCATTGAAATGTCCTAACGAGGACTGCTCGGAAACTTTTGGCCGCGGCTACGATCTACACTACCATCTGCGCGACGCACATGGCATCAATGAGACGTGGATAGCAGAACGCGGCCCTCGGACTCCCGACGGTCCGCTCAAGGATCTGCAATGCTCTATATGCTTCAAAGTACTGGCCAGCAGGGGCAATTATGAAAGGCATATAGATTACCACAACTCTCTTAGGTGCAACTACTGTTTCGACTTCTTCAGCAGTCTCCGATTCCTGGAAGGCCATTTAACCTTCAGCTGCGAAAAGAAGAAATTAATCGGCGACACTGAGATATACCCGAAGAAAGTGAAGTGCCATATATGCTACAAAGCATTCCACTTGCAAGTGAAGTTGGACTGCCATTTGCGCACCCAGCACGATATTAAAACATTCAAGGTAGCTTCCGAGGGCAAGAAGGAGATAGTATGCGACTATTGTTTTAAGGTGTTCGAAAACGAATACGCTCTCAGCACCCACAAGATTTATCACCGCACAATTGGCTACTATGGCTGCATATATTGCAACCGGAAGTTCAATACTATGACGTTGTACCGGAAGCACAAGAACCACCACTTCTCCCAACTCAACGTCGACAACCCAACGAAATGTGAACATTGCGACGAGACGTTTGTTGCATTCAGAGAAATGATATACCACATGAGAGACGTTCACGGCGACGACAAGGAGTGGATCGTGTTACCCAAGGAGTCCATTGAAGAGAAATGCAACATCTGCAACAAaattttcttcaatcttcatagGCATATGGATTACCACGAAGAAAATAGATGTAAAAAGTGCGGAGAATACTTCTTCTCACAATTGGACTATGATAACCATTTATGTGCAGTTGACAGTGACGAAGAAGTGACCGAAGCTACTACAAATGGTGTCCGGACAGTTTATGAGGAGTGTGCGTTCTGCTTTAAACCCGTAACTAAAAAGAGCTCAAAGAAAAAGCATGATATGATCCACAAGGGATCCGGATCTATATCATGCAGATTCTGCGCTCTCAAGTTTAAAACCATAGATGCATTTAACATTCACGCATTTTCCCATCGGAGCAGAAAGTACAAAATAAAGCCAATTAAATGTCGTAAATGCGGAGAGAAGTTTGTGAAGTACGGTCCGTTTATGAAGCACATGAAGGATGTTCATAAGTCCTCTAAGAAGCTTCACTACAGAGCGACAGTTATGCCGGAAGAATGTGTCGTTTGTCACGAGAACTTCCCGAATCTGCACAATCACTACCGCGCCCATTTACAAAATCAGTGTCAGCAATGCTTTAAATATTTCAGCTCCTTTAAGTTATTTTCCATGCACGAATGCGATAAAGAAGACGCGAATCCGGCTAAAGTGTTCACCTGTGACGAAAACTTGATCCATTTGATTAATACATATGTTCCTAAGGATGTGAAAGATGATGAGAAGTATTACGGTTACGAGGAAGTAGACGGTGAGGATGAAGAGGTTGATGCTGAATCACCAGTTGATACTGTCTCGTTTACGCCTCTAATTAAATCGCATGAGCCTGATATCATGTCACAAGACGAGGACAGCCAAAACTCTATAGACATTGATGAACAGAATGTCCACGCTATGGCTCACGCGCCCATAATATCCGACGTTCTTTCTCTCTTTACCGAGAAAGAAGATAAAAACAATTCCAATGATAGTGTTGTTGTATTAACAGACGAAGATTCTGTCGGTTTTGATGACAAAATTGTTACTGTCATAACAATAGAAGACGATTAA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNNMQLAEMVMECARVKIYDGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSPTPPPNRQSSDSAFSSHTEVSKPSSSTESQVTPVSRTRKRSRDSVDEASTSSRSNYKPGSSKRVDELRMSKKKPRVSQTSDSDYEDNSASFYSAETDSDEPLQHKCNQCAKSFRSGKSLSAHMKSHKRKCNLILNAQNSQSVTPEKWPKKPEQITKVPEDEKAKFHCDKCGNNYKLQIMLKRHYEVCGKSPQKELLVSLEPIDMVQHAAKLSAKIDCEMCTTKFKTMDNLEKHMRIVHAAVLKRERVSISNENGVIGVPCVYCKEPFQDYYVHSAHLSTCPKKNDAVTFECPMCKKVIAKKASYTLHAKMHFFQLAASNDEQPSTTTVNSTERENFQCRMCTKKLPTQESLISHLAAHMNKVEADDDEDVGIDDDDSRASTADDSASIQSDFTSYITSGPLKCKFCDKSFKYKKALKSHEDRHAEGDIKIEKPDRNTNHLMNMSNNTYRSDESGADSSQDEGEEDNTCDICEKQFSYKRLLIKHKRTKHCMTAGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQKHITANIRPRNLYTCKECGEQFKSCSGLANHIKLVHRLHQPPTNKKIVVPSADVADFCEVVVTKAEPLDELQSHNGFEVSVDTTVNMSGFTCPVCNKTLPTLISLKRHVNWHKNVGNNIEKKLECFVCKEIFRFQCHYKIHMRQHYKDPNLDPKLLTCSICNRKSKHLRAAQAHMNYHKQTRFKNKDYECSICKRVFQYRKVYLSHMAIHFKRGESAATAVVGDALPLSVDKSKFDGTHTCHLCGKVCDSENSLKCHVSWHNSKTLLYGARHTCEICNVQFTNKRRLEIHTRTHFEDENGPYKCHICGKGFIVEDYFKRHVKGHNFDHQSHKKRIEKLRKDKVKCPICERYYPDLVHLIRHLRRTHPESKMIKEDPDAPPPIYYSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRIHIKGHLTQKYIDEPLKCPNEDCSETFGRGYDLHYHLRDAHGINETWIAERGPRTPDGPLKDLQCSICFKVLASRGNYERHIDYHNSLRCNYCFDFFSSLRFLEGHLTFSCEKKKLIGDTEIYPKKVKCHICYKAFHLQVKLDCHLRTQHDIKTFKVASEGKKEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCIYCNRKFNTMTLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWIVLPKESIEEKCNICNKIFFNLHRHMDYHEENRCKKCGEYFFSQLDYDNHLCAVDSDEEVTEATTNGVRTVYEECAFCFKPVTKKSSKKKHDMIHKGSGSISCRFCALKFKTIDAFNIHAFSHRSRKYKIKPIKCRKCGEKFVKYGPFMKHMKDVHKSSKKLHYRATVMPEECVVCHENFPNLHNHYRAHLQNQCQQCFKYFSSFKLFSMHECDKEDANPAKVFTCDENLIHLINTYVPKDVKDDEKYYGYEEVDGEDEEVDAESPVDTVSFTPLIKSHEPDIMSQDEDSQNSIDIDEQNVHAMAHAPIISDVLSLFTEKEDKNNSNDSVVVLTDEDSVGFDDKIVTVITIEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00205388;
90% Identity
-
80% Identity
-