Btre009818.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- -
- Assembly
- GCA_010883055.1
- Location
- NC:175924174-175950217[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0001 0.0039 17.2 5.2 1 23 278 300 278 300 0.98 2 15 2.6e-05 0.001 19.0 1.8 2 23 305 327 304 327 0.95 3 15 0.00019 0.0076 16.3 0.8 2 23 373 394 372 394 0.97 4 15 1e-05 0.0004 20.3 2.4 1 23 400 422 400 422 0.98 5 15 0.0041 0.16 12.1 0.1 2 23 429 450 428 450 0.96 6 15 1.5e-06 5.9e-05 23.0 3.1 1 23 468 490 468 490 0.98 7 15 7.6e-07 3e-05 23.9 1.2 1 23 496 518 496 518 0.98 8 15 4.4e-06 0.00017 21.5 0.5 1 23 524 546 524 546 0.97 9 15 0.00063 0.024 14.7 0.2 1 23 552 574 552 574 0.99 10 15 0.00041 0.016 15.3 0.2 3 23 582 603 580 603 0.92 11 15 2.6e-05 0.001 19.1 1.3 1 23 609 631 609 631 0.98 12 15 0.00056 0.022 14.9 4.7 1 23 637 659 637 659 0.98 13 15 5.7e-06 0.00022 21.1 0.2 1 23 665 688 665 688 0.96 14 15 1.6e-06 6.2e-05 22.9 0.5 1 23 694 716 694 716 0.97 15 15 4.9e-06 0.00019 21.3 4.5 1 23 722 744 722 744 0.99
Sequence Information
- Coding Sequence
- ATGAATGCTGAATTGTTAAATCCAAGAATTTCACTTTCTTATTCACTGAATGACATGCCAAAAGTCAATTCGCAATTTAGAGGAGAAAGTTACGATGAAACTGAAAATACGAAAAAGAAGcTTCTCTCACAAATCGAACCGGAAGCCGATACACTGAGAATAATTGATCCTCTTTCAAAAAACcatttagaaaatggaaaaagaggaCAAATCGATGTGATAGACATGTCAGCTGACAATACATCaccttataaatatttatttgtttatgaagACAGATTGTCAAGATACATTGTACTTAAAGCGATGAAAAGTAATGATCCCAAAAAAATAGCAATGCATCTTCTAGATGTGATAACAATCATCGGCCTTCCTCATATTTTACAATCCGGAAATGGTCGAAATTTCAGCGACCAAGTGGTCCAAGAATTGCGTTCTTTGTGGAACGGATTCGACATAATTAGTGGAGACCTTCTCCAATTTGCCTCGagtgaaagaaatttcaaaaatattattaaatcctgGCTGGCAAAACACAAAAGCAAAACGTGGCTTGAAAGTATCAAATTTATTCAAGTTTTACAAAACGCAACCTTTCTTTCCCAGGACGGCAAATTGCCGCACGAATcgctttttaaaagaaatgtctATGAAGAATTTCTTCAATCTAATCATAAAAGAGATGATTTTATAGTCGAAGAATTTAAATTCGAGAATAATGATCGTGACAATTCCTCTATTTCTGATGGCGATAATCATGAGGATGAAATTAGTGAAACTCCCGCAGATGATTGGATTTCAGAAGACGAAAAATCGAGAGAAAAACAGCCCCACAAGTGTAAAATCTGCCCGAAAAAGTACACGAAACTCGGACACTTGACGAATCACCTCAAATTGCACAAGTCAAGCAAAGAGTGCACAAAATGTGGGAAAAAATTCCGATCTCAGTCTCTTTACGAGAATCacgtgagcaaaatgcatcaagaGTTATCCGAAACTATCAGCAGTGCAAGTAATAATTCACCAGAGAAAGAAATCGAAGAGATTTCATCAGAAAAGGTATCAAAGTCAGGAAAAAGGCCGAGAAGGCGACCAAAATTGAACGGAAGTTTATTAAAATGTAGCTACTGCTCGCAAGAATTTGAATTCCCCAGTGTTTTAAAAAGACATGTCCGCTCGCACACGAACGAGCGGCCCTACGTCTGCAAAGTCTGCAATAAAAGCTTCAAACAACTCGGACATCTCAGCCAGCATTCGATAACTCACACAGATTACAGATCTCTGCAGTGCGGCGAATGTAGCATCAAATTTGATTCGCTCGACGCCCTCAAAATTCATTCCCAGAGCCACTCGAGCGAAACGAGTGAAAAATCCAATCCCACTCTCTCAATGACCCGGCTTTTCGAGTGCGACCACTGCAAGAAAGTGTTTACGACCAAGAGCGTCCTCGAGCGTCACATCTTCACCCACACGCACGAGCGCCACTTTGAGTGCGAAGTTTGCGGCAAGCGCTTCAAACAGTCCGGTCACGTCAAGTCGCACATGCTCGTGCACACCGGAGAGCGCAAATTCCCCTGCACCATTTGCCCGAAGCGCTTCAGTTTGGCGAATTCGCTGAAGAAGCACATGTACATTCACAATGGTGACAAGCCCTATCAGTGCGACATTTGTGGCGCGAGATTTCTCGAGAAGCGAAATCTTAATGGACATCTGATGACGCACACGAATGAACGACCCTTTGGCTGCAAAGTCTGCGGCAAGAGGTACACTCTCGCGGACACTTTGCGCCGTCATGTGAGCGCCGCGCACGAGGACGGACGGACATATCAGTGTGAGATATGCGCGAAGATGTTCAAGCAACTGGCGCATCTCTCGGTGCACAAAAAAGTGCACAATGACGAGCGACCGTTTCAGTGTCATCTCTGCGAGAAGAACTTCAAGCACAAGAACGTGCTCAAGTCGCATCTGGCGATTCATGCGAATGTGCGGCCATTCGAGTGCGACGAGTGCAAGGCGACGTTTGTGCGCAAGACGAATTTGCAGACGCACATCGCTTCTGCGCATATGAATGAGAGGCCTTATGCGTGCACCATTTGCGGCAAGAGGTTTAAACAAGTGAGTCATCTGAATGGACATATTATTGTGCACAGCAATTCGATGCCGTATCAGTGCGACTTTTGCGATCGGAGGTGCAACAGGCTGGATAATTTGAAGAAACACATGCGACTGCATACGAATGTGGAGATTGTGAGGAGAGAGGGGCCGAGGACGGGAGGTGTTTCGATGAGTCGGAATAGGGAGGTTGATAAGGCGGGGTTTGATCATTATTGCAAAAGGATTTGA
- Protein Sequence
- MNAELLNPRISLSYSLNDMPKVNSQFRGESYDETENTKKKLLSQIEPEADTLRIIDPLSKNHLENGKRGQIDVIDMSADNTSPYKYLFVYEDRLSRYIVLKAMKSNDPKKIAMHLLDVITIIGLPHILQSGNGRNFSDQVVQELRSLWNGFDIISGDLLQFASSERNFKNIIKSWLAKHKSKTWLESIKFIQVLQNATFLSQDGKLPHESLFKRNVYEEFLQSNHKRDDFIVEEFKFENNDRDNSSISDGDNHEDEISETPADDWISEDEKSREKQPHKCKICPKKYTKLGHLTNHLKLHKSSKECTKCGKKFRSQSLYENHVSKMHQELSETISSASNNSPEKEIEEISSEKVSKSGKRPRRRPKLNGSLLKCSYCSQEFEFPSVLKRHVRSHTNERPYVCKVCNKSFKQLGHLSQHSITHTDYRSLQCGECSIKFDSLDALKIHSQSHSSETSEKSNPTLSMTRLFECDHCKKVFTTKSVLERHIFTHTHERHFECEVCGKRFKQSGHVKSHMLVHTGERKFPCTICPKRFSLANSLKKHMYIHNGDKPYQCDICGARFLEKRNLNGHLMTHTNERPFGCKVCGKRYTLADTLRRHVSAAHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAIHANVRPFECDECKATFVRKTNLQTHIASAHMNERPYACTICGKRFKQVSHLNGHIIVHSNSMPYQCDFCDRRCNRLDNLKKHMRLHTNVEIVRREGPRTGGVSMSRNREVDKAGFDHYCKRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00011367; iTF_00089804; iTF_00064661;
- 90% Identity
- -
- 80% Identity
- -