Bbay006944.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bellardia bayeri
Gene Symbol
su(Hw)
Assembly
GCA_950370525.1
Location
OX493264.1:131795924-131798916[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.00093 0.075 14.3 2.1 1 20 134 153 134 155 0.94
2 12 7.9e-06 0.00064 20.9 0.4 3 23 206 227 204 227 0.93
3 12 0.084 6.8 8.2 0.4 1 23 233 255 233 255 0.94
4 12 3.5e-06 0.00029 22.0 2.2 1 21 262 282 262 283 0.95
5 12 1.8e-05 0.0014 19.8 2.2 3 23 296 316 294 316 0.96
6 12 2e-06 0.00016 22.8 3.4 1 23 327 349 327 349 0.98
7 12 8e-05 0.0065 17.7 0.8 1 23 355 377 355 377 0.97
8 12 1.7e-05 0.0014 19.8 1.0 1 23 383 405 383 405 0.99
9 12 4.1e-06 0.00033 21.8 0.9 1 23 411 433 411 433 0.97
10 12 2.5e-06 0.0002 22.4 0.8 1 23 437 459 437 459 0.98
11 12 0.0015 0.12 13.7 0.9 2 23 473 496 472 496 0.92
12 12 1.7 1.4e+02 4.0 0.2 3 23 511 532 509 532 0.93

Sequence Information

Coding Sequence
ATGAGTTCGAAAGATGAGCAATCAGTTGCGTCCACTAGACGTTCTAGTTCgagtattaaaatattaaatgatgaaaaaataacGGCACTATTACCATTAAAAGTACCCGTGATGACTTCGGTACCATTGTCGCCTCCTAAGCAAATCACTTTATCTATTGCCAAACCCAAAAaagcattaaaacaaaaaaacatggaTCATTATGTGATGAAGACCGTCAAAGGAGAGAAAAATACTGATACCGGTTTAGAAGAAAGTGAAACAATTGATTTTATATTGGCGGAGAGTAATGAAGACGAGTTGTCAAAGCCGAGTGTAGAAATATCGGAAGAACTACATCTAAGTGATGATGATGACCATGATTCCACATTTACCGGTTCAACACAAGAGATTGTTGAACATGTATGTGGAAAATGCTATAAGACTTTTAGGAGAATAAAGAGTCTCAAAAAACATCTCGATTATTGTCGTTTTGATAGTGGTTATCACATTCGAAAAGCGGAAATGTTGAAAAACTTAGAGAAAATCGAAAAAGATGCAATTATAATGGAAAATAAggatgtttgtttttgttgtggtGAAAGTTATGATACATTTCATTTGGGCCATATAAATTGTCCCGATTGTCCTAAATCATTTAAAACCCAAATGAGCTATGAACGTCATATATTTATAACACATTCTGAGTTCGATGATCACCCCTGTAGTATTTGTAATGCTAAATTGCGCAGTGCTAATCTTTTGAAACTACACGAAGAGCAACATCGTAATCGTGGCAAACCATTTGCTTGCAAGATTTGTGGCAAAGATTTTACTCGTTCATATCATTTGAGCCGTCATCAGAAGTTTTCCTCCTGTTCGGCAAATGAGAATGATACTATGCATTGCAAGGTCTGTAATAAAGCATTCTATCGTTTAGATAATTTAAGAGCACATCTGAAACAACATTTGGGTACTCATCAAACCAAGAAATCGGAATATATGTGTCcgatatgtaaaaaatgtttctatagtTTGTCAACTTTAAAtatTCACACGCGTACTCATACAGGAGAAAAGCCATTCGATTGTGATTTATGTGAGAAAAAGTTTCCATCATTGGtagctttaaaaaaacataGACGATATCACACTGGAGAAAAGCCCTATACCTGTTCAGTGTGTAAACAATCGTTTGCAGTCAAGGAAGTATTAAACCGTCATATGAAACGTCATACCGGCGAAAGACCTCATGTTTGTAGCGAATGTGGTAAAAGTTTTATACAAGGCACTCAACTTCGTACTCACATCAAGATCCATCTAAGGCCCTATGAATGTGATCAATGTCCAGAGAAATTTAGAACTGAGAAgcaATTAGAGAAACACATGAAAGAGCATAATTCCACAAACCGAAAGGGGCGTACACGAATGGCCAATAAATGTCTGATATGTAAAAAGGGCTTTAAAACTGAGCTGGAGTTTAACAATCACATGCAGATGGGTACTCATTTAAcacCAGCTCAAAGACGTAAAATAAAAAGTCGTACTGATTGCGCAGTATGcaaagaaaatttcgattctgTGCAAAGTCTTCAATTTCATATACTAAAAGTTCACCAAGAAGATCCCGAGACTTTTGTCAATGAAGACCCTTTCGGAACTCCCTCACGAGTTAAGGATATTGATTCTATTCTAATGCCAGCTCCTAAGGTTATCAAAATTGAAGATGCCCAGGGTCAACGTATAGAATTTGTTACCACTAACAGTGagggtaaaattttaaataccaacattCAGGGTctaaatcaacaacaaattttaagtcCAGGTGGCAAAACGGAAGATTCTAATAAAGTGCGCATTTTGGAACAATATATAATTGACGATAGTCCTTCAACATCAGCAAGTGCTGGTAGCAAACAGACTATATTCTTGTCGAATGAAGCTTATACTGTTATACCGCTAGAATCTGACGGCGGTATTATAGAGCCCATTACAACAAACACATtgccaaataatattataagtCCTGAAAGCAAAAAAGAACAACGGAGGACTTTGGCTGAAAGTTTGGCAGCTGCTATAGCCGACGATGATGAAAATGATTTAGATACAATCAATGAAGAGGAACTACAATATTCCTACGAAGATTTAAAGCTTAAAGATAATGTTAGTAAACTATTGGATATGTTGGTGGATAATTGTACACTCAAGAAATTTGGCTGGCCAGAGATTTCGGAAGAAACCGTGCTTTGCAAAGTTATTGAAAATTGCGGCCATGACTTATCAAAAGACCAATATAATTATACTGCTTGGGATTATGCCAGTCGTATGCGTGAATATGTTAAATTACTATTCACCGTTGTCATACACAACGATTCCATTAAGGAATTACTTAATAATTATCCAATCGACGAAGTTATAGAATACGTTTTGGGCAATGACGAGGATGATGACGACGAGGAAGACAACAGCGCAAATAATAGTAATGACAAAGGAAATGATAAAACTATTTTAGAAACCATTAAACGGGAAAGTGACGATTAG
Protein Sequence
MSSKDEQSVASTRRSSSSIKILNDEKITALLPLKVPVMTSVPLSPPKQITLSIAKPKKALKQKNMDHYVMKTVKGEKNTDTGLEESETIDFILAESNEDELSKPSVEISEELHLSDDDDHDSTFTGSTQEIVEHVCGKCYKTFRRIKSLKKHLDYCRFDSGYHIRKAEMLKNLEKIEKDAIIMENKDVCFCCGESYDTFHLGHINCPDCPKSFKTQMSYERHIFITHSEFDDHPCSICNAKLRSANLLKLHEEQHRNRGKPFACKICGKDFTRSYHLSRHQKFSSCSANENDTMHCKVCNKAFYRLDNLRAHLKQHLGTHQTKKSEYMCPICKKCFYSLSTLNIHTRTHTGEKPFDCDLCEKKFPSLVALKKHRRYHTGEKPYTCSVCKQSFAVKEVLNRHMKRHTGERPHVCSECGKSFIQGTQLRTHIKIHLRPYECDQCPEKFRTEKQLEKHMKEHNSTNRKGRTRMANKCLICKKGFKTELEFNNHMQMGTHLTPAQRRKIKSRTDCAVCKENFDSVQSLQFHILKVHQEDPETFVNEDPFGTPSRVKDIDSILMPAPKVIKIEDAQGQRIEFVTTNSEGKILNTNIQGLNQQQILSPGGKTEDSNKVRILEQYIIDDSPSTSASAGSKQTIFLSNEAYTVIPLESDGGIIEPITTNTLPNNIISPESKKEQRRTLAESLAAAIADDDENDLDTINEEELQYSYEDLKLKDNVSKLLDMLVDNCTLKKFGWPEISEETVLCKVIENCGHDLSKDQYNYTAWDYASRMREYVKLLFTVVIHNDSIKELLNNYPIDEVIEYVLGNDEDDDDEEDNSANNSNDKGNDKTILETIKRESDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00045491;
90% Identity
iTF_00045491; iTF_00259094; iTF_00259959;
80% Identity
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