Bphi027411.1
Basic Information
- Insect
- Battus philenor
- Gene Symbol
- lrrfip2
- Assembly
- GCA_028537555.1
- Location
- JAQMYT010000006.1:15027640-15043314[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-76 1.2e-71 242.0 21.0 1 268 110 385 110 404 0.87 2 2 1 2.7e+04 -7.6 19.0 1 48 405 451 405 478 0.68
Sequence Information
- Coding Sequence
- ATGGGTCTGGCTTCGGTACTGACTTCAGACAGCAGCGACGAGGAGAGTGGTTACACCTTCACCGATGGAGACTTCGACGACAGCGACGAATCCGTCGTAGTCGCATCAAAAACGACTCAGTTGCCTCTCAATGAAACCATTAATCCAACAGTCGAAAAAATAGAAACAGATAACGATGATAAAGACAAAGAAATAGTTCTAGCTAATGGCGATAACACAGAAGTTGTAGGTAATGAAGAAAGTGGTTATATGGACCAAGATGCGACGGATGCGTGCGAAGAAATTAACCCGTCCATCGTTGGAATTCTAGGCGATCAGCAAACCCATGCGGAACAACGGCTGGCGGCGAGGAGGGCGGCCCGCGCGGAGGCGCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGCGGGAGCAGGAGGACCATGCCGACAAGGCCTTCGACATGTATTCAGAGACAGTTGGGCGGCGAGGCGGTCGTCTGGCAGCCCTCAGCCCGTCCATGCACTCGCCGCGGCGCAGCTCCGAGGACTCCGCCGATGACGTCTTCAGCATCAAGGACTTGAGGCACGAGCTGAAAGAAGTGGAGGAGAAGTTCCGCAAGGCCATGATATTGAACGCGCAGTTGGACAATGACAAGGCGGCACTCGGCTATCAACTGGAACTGCTCAAGGATAGGATAGAGGAGTTGCATGAAGAACACGCTCAGCTGCAGCGTGAACACAAGGAGAAGTGCTCGGCACATGAGCGTCTTAAACGCGAGCATGCGACACTGGAACGCGAGGTGACGGCGGCGCGGGACGCCATCAGAGCGCGCGACCACGCCGCCGCGACTGCAGGCTTCGCATTCGTGGAAGCGGAGCTCAATGGGGCGGCGCCCTGTGAGAACGGGCAGAAGGGTGGCGAGCTTGGGGACGAGCCAGTCGCGGCTCAAGGTTTCGGCAGCGTGCCGCCGCTGGCGCTCGTGTCGCATCACTCTGAACAGCTGCTCAACGACGCTGGAGAGGGGACACTAGACGTGCGGTTGCAGCGGCTGGTGAGCTCGAAGCAAGCTCTGGAGTCGGAGGTGCGGAAACTGAAGCTATGTCTGAACGAAGAACGCGCTGCGCGTCAAAACGGCGTCGCCTCCCACCACGACAGAGAGCACGACAGCGAGCTGGAATCGCTGCGCAAATCGGTAGCAGAGGCAAAGGGCCGGGCAGCGAGGGCGGAGGCTGAAGCGGCGCTGCAAGCAGCTGCAGTGGCAAGGTTGGAGGCCCAGGTGGCCAGGCTACGTGCACGCCAGGAGCACCAGGATGAACATGAGGAGCAGCTGAAACAGGAGCGCCGTCGCCTTCAGAGGGAGGCAAGGGAAGCTCTGAACCGAGTCGAGGAATTGGAGACAGAAAATAGCCATCTGACGAAGCGACTAGACAAACTGAAGAACGCCAAGTCGGCACTCCTCAAAGAGCTGTGA
- Protein Sequence
- MGLASVLTSDSSDEESGYTFTDGDFDDSDESVVVASKTTQLPLNETINPTVEKIETDNDDKDKEIVLANGDNTEVVGNEESGYMDQDATDACEEINPSIVGILGDQQTHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAFDMYSETVGRRGGRLAALSPSMHSPRRSSEDSADDVFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEHAQLQREHKEKCSAHERLKREHATLEREVTAARDAIRARDHAAATAGFAFVEAELNGAAPCENGQKGGELGDEPVAAQGFGSVPPLALVSHHSEQLLNDAGEGTLDVRLQRLVSSKQALESEVRKLKLCLNEERAARQNGVASHHDREHDSELESLRKSVAEAKGRAARAEAEAALQAAAVARLEAQVARLRARQEHQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01337765;
- 90% Identity
- -
- 80% Identity
- -