Basic Information

Insect: Barypeithes pellucidus
Gene Symbol: -
Assembly: GCA_963991005.1
Location: OZ022558.1:72931219-72953258[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 9.4e-05 0.0084 17.8 0.5 1 23 169 191 169 191 0.95

2 15 0.0005 0.044 15.6 0.6 3 23 199 219 198 219 0.99

3 15 0.00019 0.017 16.9 1.6 1 23 327 349 327 349 0.98

4 15 0.047 4.2 9.3 0.2 1 23 355 378 355 378 0.96

5 15 2.7e-07 2.5e-05 25.8 2.7 1 23 403 425 403 425 0.98

6 15 0.024 2.1 10.3 0.0 1 23 438 460 438 460 0.94

7 15 0.2 18 7.4 0.0 1 23 466 489 466 489 0.93

8 15 0.036 3.3 9.7 2.6 1 19 495 513 495 514 0.96

9 15 0.00093 0.083 14.7 4.7 3 23 525 545 523 545 0.98

10 15 0.012 1.1 11.2 0.3 2 23 551 572 550 572 0.96

11 15 1.9e-05 0.0017 20.0 0.4 1 23 580 602 580 602 0.98

12 15 0.0082 0.73 11.7 0.2 3 23 610 630 608 630 0.97

13 15 0.00026 0.023 16.4 0.3 1 23 636 658 636 659 0.95

14 15 0.35 31 6.6 0.7 1 23 673 695 673 695 0.96

15 15 0.00023 0.021 16.6 0.0 1 20 1097 1116 1097 1119 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	9.4e-05	0.0084	17.8	0.5	1	23	169	191	169	191	0.95
2	15	0.0005	0.044	15.6	0.6	3	23	199	219	198	219	0.99
3	15	0.00019	0.017	16.9	1.6	1	23	327	349	327	349	0.98
4	15	0.047	4.2	9.3	0.2	1	23	355	378	355	378	0.96
5	15	2.7e-07	2.5e-05	25.8	2.7	1	23	403	425	403	425	0.98
6	15	0.024	2.1	10.3	0.0	1	23	438	460	438	460	0.94
7	15	0.2	18	7.4	0.0	1	23	466	489	466	489	0.93
8	15	0.036	3.3	9.7	2.6	1	19	495	513	495	514	0.96
9	15	0.00093	0.083	14.7	4.7	3	23	525	545	523	545	0.98
10	15	0.012	1.1	11.2	0.3	2	23	551	572	550	572	0.96
11	15	1.9e-05	0.0017	20.0	0.4	1	23	580	602	580	602	0.98
12	15	0.0082	0.73	11.7	0.2	3	23	610	630	608	630	0.97
13	15	0.00026	0.023	16.4	0.3	1	23	636	658	636	659	0.95
14	15	0.35	31	6.6	0.7	1	23	673	695	673	695	0.96
15	15	0.00023	0.021	16.6	0.0	1	20	1097	1116	1097	1119	0.94

Sequence Information

Coding Sequence: ATGGAAGAACCATCCTTTACTCTGACCTGGGAGGACGCTTCGACAGTTGTCCAAACCGAGGAGGTTATATCCACGATGGAAAATGAGATAATCCCGGCGCAATCTGAGGAATTCATCGGTGAAGTTCAGGGCGAAGAGTACCCGGAGAATGTGGAACCCGAAGATTTGGTTGAGCATGTGGGCGTGGTGGAAGAAGAGGTGGTACAAGATAATTCGCAAACTGAAGTGAGTCTAGAAGACACACAAGTAGCAGATGATGGAAGTGTTATGTATTTAACAGATGACAATGTTTTGGTCATGCACGACGGTGATTCGGGAAATTACTCACAAGAACAGTTAATGGAAGTCACAGAAGAAGTGATCACTGACCAATGGGGTGAAAGTTGTCCCGAAGAAATAATAGTTGGTTCAGAGGAGGCTGTGGGGGCCATGGAGGGACATCTTGTCGAGGATGAAGATATACCACTGCCAACAGACCAGGACGAATACACTGCCGCCAGACCATATCCCTGCGATTTTTGCAGCAGAAGGTTTCGAAAAAAGGCCAATTTGGTGAACCATATGGTGGCCCATCAAACAGACCGTCCCCATGGATGTAATTTGTGTGGAGTAAGGTATATGAGGAAATCGGATTTGATGAATCATCTCAAAAGTCATGCTTATATTCCGGAATCGGATCCCATGGAAGATGAGGAGCATCCACTGTATGAACACAGTTTTGACAAGCCGCGGAAGAAGCCAAAAGGTTATGGCAAGAAGAAGAGAAAGAAAGCCGCCGTAAGAGAAGATTATGAGAGCATGTTTACAACAGCAGAAAcagCCCCTTCTAGTTCTCGATTCAACTTCCAAGAACCGACCGACGACAAGTTATTAGAGGGCGAAATCGATCCCAACACTGACTACCTCACTACGACATCGACACAAGAAGTAGAGGAGGAAGTAGACATAAAGTATCCAATTACGGATCCGAAAAAGCCTTTTGTATGTCAGCACTGCGGGGTTTGCTTCGCAAGAGAAAAGGCGCTTGCTTCCCACTCGAGGGTACACGGGGGCGACAGTCCCTTTGAGTGTCAGAAGTGTGGGGAGATGTTTTGGGATATGGGCCTTATgcagGAGCACGCAAGAACCAAACACGGTGAAATGGAGGACTTTGATGATGATGAAGATGAAGACTACTCGGATTCGGAGGAGACAAAATACGGGACGTACTATTGTCCCACTTGTGGGCTGTCTTTCCACAGGCAAGACAACTTACGAAGACACCAGAGGATACACATAAAAGAAGAGTATGTCAACGAGCATGAGTTTGGGCATATTTGTAACGTTTGTGGAGAATCTTTTCAGGAGGCCCTTGATCTTCTCGCTCATGCAGAGGTCCACGCGCGTGGCTCGGAATACCGCTGTATGATTTGTGGAGAAATCTGTCCCGATGAAAACGTGTTGGCCACGCACGTCCAAGGTATCCACACGAACTTGCCGCCACATACATGTGCCTTGTGTGGACGCACCTGCAAAGACAGCAGGACTTTGTTGAAACATTCTTGGGAACATTCTAAGgaaaaatcgttTGGTTGTACAAAGTGTTCCAAGACCTTTCATAATAAGGCTCGTCTTAAGCGTCACATGCTGTCACATAGgAATAAAGTTGTATCCTGTGATGTTTGCGGAGAAGATTTCCCAGACGGTAGAAGTTTAATGAACCACAGGCACAGTCATAGCAGCGTATCCGGTAGGCAATTTCCCTGCCGGGAATGTGGAAAAACGTTTGGATCGAGGAGCTCACAGCAGATTCATATTCGTATCCATACagGTGAAAGGCCTTATGGTTGTCGATTCTGCTGGAAAGCATTTGCAGATGGCGGGACTTTAAGAAAACATGAGAGGATTCATACTGGTGAAAAACCGTATGCTTGTGCAGTCTGCCCAAGAGCTTTTAATCAGAGGGTCGTTTTGAGAGAACATATTCGGTCTCATCATTCAGGTCCAGACCCCAAATATTCTCACAGTATGACACCTTATTGCTGCGCGGTATGTTCGGATATGTTTGCCACTGCACAGGATTTGATTTTACATCTGATCCATCATTGTGACATGAACACCGCTATGAAAAGACAGCCCCAAGTTGGCCCCCGAAAATATAAAAGAAGGAGAAAACTTAAACCACATGAATTAGACCTTATATCTGCCACGAATCAGGTGGAAGAGGACAGTTATGGGATGGACGAGCATATGGAAAGCCAAGACTATGAACAAGCCGAGTCTGAGGACGAGCGCGAGACCAGAAGAAGGTCTAGAAGGACATCTTCGAGGAAAGGGTCTAGTTCATCGCCTAAAACTAGcaTAAGTGAATCAATTTCCGACATCTACAACAGCTTGAACACAATCGAAAACAATGATTCCCTTCTATTGCCTAAGTCGCCTACATCAAGAGCAAAACTAGCAAAAAAAGGCAGGAATGATAGCGTGTCTCTTCCCTCCAGACCGAAGATGATTCACACCCAAAAAACGAGAGTGCCCGTCGAGGCTACCGAAGACGGCAGGATTAGACACAAAACTAAAACGATGGTTACCAGGACGCAGCCAACAGAGCTGAAGTCGGCCACAGgtgAAAGAATAAGACCCAGAACTAAAAACGTAAACTATCACGTCCTAAATCCAGAGAAACTCCCTGTTGCCACTTTTCCAACTAACGATcaaactcaagaggccgttgAAAATCTCTTGAAGGAAGCTTCTGAAGTATCGGCGAATGGAAATGTATTGTCAGAAGAGATTATAGAACATGCTCCTGATGTAGCGGCTGAACAGATTGTTGAGACAGAGGTACCAGTACCAGTTGGAATTGTTGAAGTTAGAACAAGACGGAATAGCACCAGGAGCACCAGAAATGTTATTGGACCAGGCAGCAAAGTTAGACTAGTCAAAGAAGGAATGATCGTTTCCAAAGTTAAAAGAAATAGTGAAAGCCAGAATGAACCCGAATCGATTTTACCCGATGTTAATCAACAATCggaacaaatttttattaaggagGAACGTCTTGGTTATGCAAATATGGGTCATAACCAGACAGAAATAAGTATAACAGAAGGAGAAGAACAACACCAGACTTTTAACGAGTCGAAGCAGGACATGTCCATCAACCAACAAGGCATGGCGAGCATCCAAGAACATTATTATGCCTCGAACCCGAACGTGATTAACGTTAAGCAAGAACTGTTGGACCCGACGGCTCTGCACGAGTTGGCCGAAATATCGATGCGACACGGGAATAACACTACGAGCCTATTCAAGTGCGAAATGTGCGATGAAGTTTTCTCGGATAGGGCACAATTGCTGGTACATGTACCCATCCATATTTGA
Protein Sequence: MEEPSFTLTWEDASTVVQTEEVISTMENEIIPAQSEEFIGEVQGEEYPENVEPEDLVEHVGVVEEEVVQDNSQTEVSLEDTQVADDGSVMYLTDDNVLVMHDGDSGNYSQEQLMEVTEEVITDQWGESCPEEIIVGSEEAVGAMEGHLVEDEDIPLPTDQDEYTAARPYPCDFCSRRFRKKANLVNHMVAHQTDRPHGCNLCGVRYMRKSDLMNHLKSHAYIPESDPMEDEEHPLYEHSFDKPRKKPKGYGKKKRKKAAVREDYESMFTTAETAPSSSRFNFQEPTDDKLLEGEIDPNTDYLTTTSTQEVEEEVDIKYPITDPKKPFVCQHCGVCFAREKALASHSRVHGGDSPFECQKCGEMFWDMGLMQEHARTKHGEMEDFDDDEDEDYSDSEETKYGTYYCPTCGLSFHRQDNLRRHQRIHIKEEYVNEHEFGHICNVCGESFQEALDLLAHAEVHARGSEYRCMICGEICPDENVLATHVQGIHTNLPPHTCALCGRTCKDSRTLLKHSWEHSKEKSFGCTKCSKTFHNKARLKRHMLSHRNKVVSCDVCGEDFPDGRSLMNHRHSHSSVSGRQFPCRECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHIRSHHSGPDPKYSHSMTPYCCAVCSDMFATAQDLILHLIHHCDMNTAMKRQPQVGPRKYKRRRKLKPHELDLISATNQVEEDSYGMDEHMESQDYEQAESEDERETRRRSRRTSSRKGSSSSPKTSISESISDIYNSLNTIENNDSLLLPKSPTSRAKLAKKGRNDSVSLPSRPKMIHTQKTRVPVEATEDGRIRHKTKTMVTRTQPTELKSATGERIRPRTKNVNYHVLNPEKLPVATFPTNDQTQEAVENLLKEASEVSANGNVLSEEIIEHAPDVAAEQIVETEVPVPVGIVEVRTRRNSTRSTRNVIGPGSKVRLVKEGMIVSKVKRNSESQNEPESILPDVNQQSEQIFIKEERLGYANMGHNQTEISITEGEEQHQTFNESKQDMSINQQGMASIQEHYYASNPNVINVKQELLDPTALHELAEISMRHGNNTTSLFKCEMCDEVFSDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01188587;
90% Identity: iTF_01239385;
80% Identity: -