Bdim009997.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Balanococcus diminutus
Gene Symbol
-
Assembly
GCA_959613365.1
Location
OY390716.1:23018039-23021986[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0027 0.21 12.3 7.3 2 23 204 225 203 225 0.97
2 22 6.5e-07 5e-05 23.7 1.3 1 23 231 253 231 253 0.99
3 22 3.3e-08 2.5e-06 27.8 2.9 1 23 259 281 259 281 0.98
4 22 9.8e-05 0.0076 16.8 2.3 1 23 287 309 287 309 0.98
5 22 0.0006 0.047 14.4 0.1 2 23 316 337 315 337 0.97
6 22 0.089 6.9 7.5 0.2 1 23 343 365 343 365 0.94
7 22 0.031 2.4 9.0 0.3 1 23 369 392 369 392 0.92
8 22 0.36 28 5.6 3.2 1 23 398 420 398 420 0.93
9 22 1.2e-05 0.00091 19.7 1.8 1 23 426 448 426 448 0.98
10 22 3e-08 2.3e-06 27.9 2.0 1 23 454 476 454 476 0.98
11 22 6e-07 4.6e-05 23.8 2.2 1 23 482 504 482 504 0.99
12 22 0.0008 0.062 14.0 3.4 1 23 510 533 510 533 0.97
13 22 0.00017 0.013 16.1 0.3 1 23 540 562 540 562 0.98
14 22 0.00024 0.019 15.6 2.1 1 23 568 591 568 592 0.96
15 22 0.00096 0.075 13.7 0.6 2 23 599 620 598 620 0.96
16 22 6e-07 4.7e-05 23.8 0.8 1 23 626 648 626 648 0.98
17 22 1e-06 8e-05 23.1 1.8 1 23 654 676 654 676 0.98
18 22 2e-05 0.0016 19.0 2.5 1 23 682 704 682 704 0.97
19 22 6.5e-07 5.1e-05 23.7 4.2 1 23 710 732 710 732 0.99
20 22 4.2e-06 0.00032 21.1 3.9 1 23 738 760 738 760 0.98
21 22 3.7e-06 0.00028 21.3 3.9 1 23 766 788 766 788 0.99
22 22 0.2 15 6.4 3.7 2 23 799 821 798 821 0.96

Sequence Information

Coding Sequence
ATGGAATGCAATGATTCTGTATTCATCGAAGAAGGCGCTTGCGAGACTGTCATCGCCGATGACGTAGTCACCGAAGAAATCCAAGCCGAAGAAGTTAcacaagaagaagaaaatctacAGACTACAAATGAAGAGAACGACCAGTGGTATATTTATTTGCTTCAAGCTGACCAAGCGTTGCATCAATTACATGGCAGCAAAGTTGAGATCGAATTACCCAAAGAAGAAGTGGAGAATTTGGAAATGGCGATGGCCGGCGGCCAGTACGAGTGTGAAATTGAAGCTGAAATAGAAGACGTGAATGATGTTCAAGAGGAAGGCGTTGTCGTTGAGAATAAAGACCAATACGAATACAATATCGATGCGATTCGTCAAATACAAGAGGCCAAAGTAGAAATCGAACAGGATGGGTTTAATTACACCATCGATATGAACGGATTCAAAGAAGAACCTCCTGAAAATATAGAAACCATCGATCCCAATATGTATAACGAATATGCTTCCGAGGTCATCATTGGAGACGAAGTAGTGATCGGTGACGAAGTAGTCATCGAAACGGAAAACGAATTTATAACCTACGCCGAAGAAGAAGTATCGGAATTCCCATTAAGTTGCAAACACTGCAATAAAACATTCCACAAACGTAACAAGCTAGAACAACACGAACGTATGCACACCGGCGAAAGACGTTTCAAATGCCCCCACTGCGAGAAAGGATTCAACCAACGAGTCAATCTAGACAACCATATTCGAGTTCACACCGGCGAGAAACCATTCACCTGCGACTACTGTCAAAAAAGCTTCAGCCAACAGGGTAACTTGAAAACCCACATGCAGAAGCATTTATACATCGAGTACTTCATCTGCCCCCACTGCAAAGATAACTTCCGCTCCAAAACCGAGCTCAACGAGCACATAAAAACACACAAAGATAACATCATCCTCGAATGCCCCTTCTGCCAGATGGTTTTCAACTCCGAAGACGAAGTCAACGAACATTTACAAACCCACTCCGGCGATCACCTCTTCTTATGTTTGATCTGTAAAGATAATTTCGGTTCCCAGGAAGAGTTAAACGATCACGTGAAAAACCACAGCCAAAATTACGAATGTATTTATTGTAAACAGATGTTCGAGCGAGAGGATGATCTCATCGATCACTTCGATAGATTACATCGTAAAGGAGACATTTACGAATGCATCTTTTGTAAACATTGTTTCGAAACCGCCGCCGAGCTGAACTATCACAGCGATACACACAAAGGTGAGAACCCGTTCAAATGTCAATATTGCGGCGAACGATTCTACACAGAGACCTTACTAACAAAACATGTCAAACTACACGAAGGTACCAAATCATTCGTTTGCTCGTATTGCAATCGTAGCTTCAGCCAGAAAGGTAATTTAAACACTCATATCAGACGACACACCGGTGAAAGACCATTCAAGTGTAACGGTTGCAATAAAATGTTCAGCGATTACTCCACGTACACCAGGCACGTTCGTGTTCACACCAAAGAGAAGCCCTACACTTGCGAATACTGTTTACGTCCATTTTCGCAGCTGTCTAATTTGAAATGCCACATTCAAAGGCGTCACGACCGAGTCGAAAGCAAATACGAATGCGAATTCTGCGTCAAGCAATTCGAAAACAAAGAAGAGCTCCTCGAACACCTGGAAACTCACACCGGCGATAAACCCTACGTTTGCCAAGTATGCCTAAAAAGCTTCAGCCAATGGGCGAACCTCAAATGCCACATTCTAAGCGGCCACCACGCCAAGCACGGTTTACTGATCTGCGAATTCTGCGAAGCCTGCTACGATACGCAAGAAAGCCTCGAGGATCACTTGAAAACGCACACCGGTAAAAACCCCTACATCTGCAACGTGTGCCAGAAAACCTACAGTTCTTCGGCCAATCTAAAGAAACACGTCAAGATCCACACCAGCGTGAAAAACTTCCCTTGCGAAATCTGCAACAAAGCTTTTTACACCCATTCGCTTCTCAAGAACCACCTAATGACGCACCAGGGTGAAAAACCCTTCAGCTGCGAGTACTGCGATAAGAGCTTCATCAATAAGTACCGCCTGAAAAGCCACACCTATATTCACACCGGTGAAAAACCCTACCAGTGCGACTACTGCCACCGATTCTTCCGCAACCAGTCCGTCCTGCGGCGTCATATTCGCGTCCACACCGGCGAACACCCTTACTCGTGTCCCTATTGcaagaaaactttcaaaacgcatTCGGAGAATAAACTCCACATCAGAATCCATACCGGTGAAAAGCCCTACACTTGCACTATCTGTAATAAAACCTTCCGCACGCATTCGGCCATCAAAATACACCAGAAAACTCACACCCTCGATCATAAATTattgggatttttaaaatgcagctGGTGTAATTCTAAATTCCGCAACATGCATGATTTACGTTTCCACATTAAGAAATTACACGACGATACGTGGGAACCTGAAAATATCGCGGTTAGTTCGGCCGAAGACGACGATGTAATGGAAGTAACCGTACCTCAGAACGAAGAAGATTTCGATGAGGAGGAAGTGGAAGAGGAGGAGCAGGAAGTAGAAGAATTTGAACTTATCGGACTCGACGATGTAATCAAAACCGAACCTATGGATAACGATATGATCGAAGAAATACAATTCTTCGTATAA
Protein Sequence
MECNDSVFIEEGACETVIADDVVTEEIQAEEVTQEEENLQTTNEENDQWYIYLLQADQALHQLHGSKVEIELPKEEVENLEMAMAGGQYECEIEAEIEDVNDVQEEGVVVENKDQYEYNIDAIRQIQEAKVEIEQDGFNYTIDMNGFKEEPPENIETIDPNMYNEYASEVIIGDEVVIGDEVVIETENEFITYAEEEVSEFPLSCKHCNKTFHKRNKLEQHERMHTGERRFKCPHCEKGFNQRVNLDNHIRVHTGEKPFTCDYCQKSFSQQGNLKTHMQKHLYIEYFICPHCKDNFRSKTELNEHIKTHKDNIILECPFCQMVFNSEDEVNEHLQTHSGDHLFLCLICKDNFGSQEELNDHVKNHSQNYECIYCKQMFEREDDLIDHFDRLHRKGDIYECIFCKHCFETAAELNYHSDTHKGENPFKCQYCGERFYTETLLTKHVKLHEGTKSFVCSYCNRSFSQKGNLNTHIRRHTGERPFKCNGCNKMFSDYSTYTRHVRVHTKEKPYTCEYCLRPFSQLSNLKCHIQRRHDRVESKYECEFCVKQFENKEELLEHLETHTGDKPYVCQVCLKSFSQWANLKCHILSGHHAKHGLLICEFCEACYDTQESLEDHLKTHTGKNPYICNVCQKTYSSSANLKKHVKIHTSVKNFPCEICNKAFYTHSLLKNHLMTHQGEKPFSCEYCDKSFINKYRLKSHTYIHTGEKPYQCDYCHRFFRNQSVLRRHIRVHTGEHPYSCPYCKKTFKTHSENKLHIRIHTGEKPYTCTICNKTFRTHSAIKIHQKTHTLDHKLLGFLKCSWCNSKFRNMHDLRFHIKKLHDDTWEPENIAVSSAEDDDVMEVTVPQNEEDFDEEEVEEEEQEVEEFELIGLDDVIKTEPMDNDMIEEIQFFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01263809; iTF_00725732; iTF_01150630;
90% Identity
-
80% Identity
-