Bdim007111.1
Basic Information
- Insect
- Balanococcus diminutus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_959613365.1
- Location
- OY390715.1:49106218-49111703[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-92 6.2e-88 295.1 25.4 1 300 30 339 30 339 0.89 2 2 0.087 1.8e+03 -1.9 7.2 123 172 340 389 338 414 0.63
Sequence Information
- Coding Sequence
- ATGGACAGTTACGCCATCGGCGGTCGTAAAAGAGCACCGAGTAATCATACAATCGAAGATCAAGCTTTAGATCAAATAGCTAAACAGgCTGAATGTCGTTTGGCTGCTCGTCGACAAGCTCGTGCTGAAGCTAAAGAAATACGAATGCGTGAAATTGAGAGACAACAAAGGGAAGCTGAAGAAAATGccgacaaaattttcgatataaatacttcagTGGACTCGACGAATCGTGGAATACGGAATGCATCTTGCGTTAATAATAGGAATACCTCTGTTATATCATCACCAGTGAGCAACACGAGTCGAAGGAGTTCCGAGGACTCGTTGGAAGATGGATTCAATTATCGAGATATCAAATTAGAATTAAAAGAACTCGAGGAGAAATTTCGGAAAGCCATGATTCAAAATGCTCAGTTAGACAATGAGAAGTCAGCTATATTATATCAAGTTGAATTATTCAAGGATAAATATCAAGACTTAGAAGCAGCATTTTCAGTATTACAAaaagaaCATAAAGACAAATGCAGAGAACACGAACAGCTGAAAAGATTATTTATCAAGCAAAAAGAAGATTTAGATTTCTTTAGGTCACAATTAGAAGAAAGAGACAGATTGATCGAAGAGCAAGGTTTAGTTGTGATTACAAATGGTGATGAAAATGGTATCCATAGTTCGCTAGAAGACGAGCACAACGATAGCAATCATATTGATTATAAACGAAAATTATCTAATCGAGTGTTGATATCATCGCAATCTGCCGAATTGTTGCAGAATTTAGGAGAAGGTTCtttagAtgatagattaaaaaaatacgcccAAGAACGTAAAGAACTTTTAAGTGAAATCAGTAAActtaaattagaattagatGAAGAACGAATAAAATCTTCTGGTAATTGCTTCGGTATGATAAATGGCTCCAATAATGATGAATTCGACGAATCAAGAGACGTATCAGGCTTACTCGGAGATTACAAATTCAAATGGCAAAAAGCCGAACAAGATATATCAACATTGCAAGCTAATGTTGCCCGATTAGAAAGTCAagttattaggtataaatcaGCCGCAGAGACGTCAGAGAAAATCGAAGatgaattaaaagttgaaaaaagaaaactacaaAGAGAGTTACGCGAAGCGCAATCGAGAGTTGAAGAACTGGAGACGACGAATATGCATTTGCAGCGACGAttggataaattgaaaaatgctaaATCGGCGCTGTTaaaggaaatttga
- Protein Sequence
- MDSYAIGGRKRAPSNHTIEDQALDQIAKQAECRLAARRQARAEAKEIRMREIERQQREAEENADKIFDINTSVDSTNRGIRNASCVNNRNTSVISSPVSNTSRRSSEDSLEDGFNYRDIKLELKELEEKFRKAMIQNAQLDNEKSAILYQVELFKDKYQDLEAAFSVLQKEHKDKCREHEQLKRLFIKQKEDLDFFRSQLEERDRLIEEQGLVVITNGDENGIHSSLEDEHNDSNHIDYKRKLSNRVLISSQSAELLQNLGEGSLDDRLKKYAQERKELLSEISKLKLELDEERIKSSGNCFGMINGSNNDEFDESRDVSGLLGDYKFKWQKAEQDISTLQANVARLESQVIRYKSAAETSEKIEDELKVEKRKLQRELREAQSRVEELETTNMHLQRRLDKLKNAKSALLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01150345;
- 90% Identity
- iTF_01150345;
- 80% Identity
- -