Btry005064.1
Basic Information
- Insect
- Bactrocera tryoni
- Gene Symbol
- -
- Assembly
- GCA_016617805.2
- Location
- NC:1922114-1934356[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.5e-09 1.5e-05 24.2 0.1 3 45 255 297 254 297 0.92 2 3 4 8e+03 -3.7 0.1 28 36 327 335 327 338 0.74 3 3 8.8e-09 1.7e-05 24.0 0.0 11 40 373 401 368 405 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAAGTTCAGAATAACCAAGAAACCAACGGAACTAATAATGGAGATGtgcctgaaattgaattgaTTATCAAGGAAgaatttatgcttgaaaatgaaattgtggGGAGTGCGAACGAGCTCAACATCAACAGAATAGCAGTTGGCGATGGTTTAAATGATGCGgacgaaaaagaaaatatagtaaaatcgaatttacaattaaaacaactacaactccaacaacatatAAAGGAGTGTAGAACAACAAATACAGAAAAATCATTCGCTCTACGTAAAGATGCTTTTGCGAAGCGGGGCAACGAGTTTTCAGACGGAGGACATGTTCTTATGCTTACTCATCACGACAACCAACATTTTCACTTCGAATATGTGACCCCCAAGCAAGATGAGAACGTGCTGGATACAATTTCCGTTGTGGAACAGAACACAATATGTTTTCAAACTGATGAAAAACTGAACAGTGAAAAATTAGCCATAAATCATACGAATCGAGTTCCATTCGCGCAAAAGCATATGAAAGATGGAGTTGTGGTTAAAGGGGAATTTTCAGTTGACAACAACCCAGTAAGCAATTTAGATTTCGCCGCAATGGTAGCCGAGGCTTGCGAAggaatttttgatgaaatcgaaAACGACTTGAGAGcatacaataacaatagcaataataatagCTGTCatgataatgaaatattttctgatTCTGTATGTGATGGTGAGGAGCGTATTGTAAAGAGAAAAAAACGAGCACATAACTCGGAAGCGGTACAACTTGCTGCAAATGCTGTATTGGACGGTCGTATGAGTTTAGGGGAGGCTGCTAAGTGTTATAATGTTGTGCGTTCAACCGTATCTTCTCGTGTCGCCAAACATCCGAAACGTAAAAGACGAAAATCGAATAAGGAATTAGAGGAGCTAATTTACAGTAAACTGAAGGCCGGTGTACAAATTTCGGAAATTTCGCGCTCTTTACATGTTCCTAAGTCAActgttcatttatataaaacaagaCTGAAGAATAACGGATTGCTGCCCGCTGTTTGGATTAGGAATGGCAGTAAAGATATGGTTGATCATGGTGTTCAAGAGAGGTTAATGCAAGCATATCGTGGTCATATTGTAAACGGAATGTCGGTACGTTTCGCTGCTGAGTTTTTCTCGTTACCGCTCACAACCTTATGGCGATACATAAAACGCAGAAAAGGTCCCACAGTGAATAACATTGACGATGACattaacaaatttgaaaatgaagaaTCCACTGAGAAAAAAAGTTGTGTTAACAACGCTTCAAATGACTTTGACGATTTAGAATTTGAAGAGAATCTGCATGTTAATGAAATGAACTCTCCTCGATCATATCCTACAGGACTGGGAacagtttttgaaaaagaagAACAAACGATAGAACAATCTTTATTAAATCAACTGTTAGAGTAA
- Protein Sequence
- MSEVQNNQETNGTNNGDVPEIELIIKEEFMLENEIVGSANELNINRIAVGDGLNDADEKENIVKSNLQLKQLQLQQHIKECRTTNTEKSFALRKDAFAKRGNEFSDGGHVLMLTHHDNQHFHFEYVTPKQDENVLDTISVVEQNTICFQTDEKLNSEKLAINHTNRVPFAQKHMKDGVVVKGEFSVDNNPVSNLDFAAMVAEACEGIFDEIENDLRAYNNNSNNNSCHDNEIFSDSVCDGEERIVKRKKRAHNSEAVQLAANAVLDGRMSLGEAAKCYNVVRSTVSSRVAKHPKRKRRKSNKELEELIYSKLKAGVQISEISRSLHVPKSTVHLYKTRLKNNGLLPAVWIRNGSKDMVDHGVQERLMQAYRGHIVNGMSVRFAAEFFSLPLTTLWRYIKRRKGPTVNNIDDDINKFENEESTEKKSCVNNASNDFDDLEFEENLHVNEMNSPRSYPTGLGTVFEKEEQTIEQSLLNQLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192744;
- 90% Identity
- iTF_00190598; iTF_00192744; iTF_00189869; iTF_00191288;
- 80% Identity
- -