Bdor006350.1
Basic Information
- Insect
- Bactrocera dorsalis
- Gene Symbol
- -
- Assembly
- GCA_000789215.2
- Location
- NW:623186-630931[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-08 1.3e-05 24.3 0.1 3 45 255 297 254 297 0.92 2 3 5.7 7.1e+03 -3.7 0.1 28 36 327 335 327 338 0.74 3 3 1.2e-08 1.5e-05 24.0 0.0 11 40 373 401 368 405 0.89
Sequence Information
- Coding Sequence
- ATGTCGGAAGTTGAGAATAACCAAGAAACCAATGGAACTAATAATGGAGATGtgcctgaaattgaattgaTTATCAAGGAagaatttatgcttgaaaatgaaattgtggGGAATGCGAACGAACTCAACATCAACAGAATAGCAGTTGGCGATGGTTTAAATGATGTGGAtgagaaagaaaatatagtaaaatcgaatttacaattaaaacaactacaacaccaacaacatatAAAGGAGTGTAGAACAACAACTACAGAAAAATCATTCGCTCTACGAAAAGATGCTTTTGCGAAGTGGGGCAACGAGTTTTCAGACGGAGGACATGTTCTTATGCTTACTCATCACGACAACCAACATTTTCACTTCGAGTATGTGACCCCCAAACAAGATGAGAACATGCTAGATAAAATTTCCGTTGTGGAACAGcacacaaaatgttttcaaacaGATGAAAAACTGAACAGTGAAAAATTAGCCATAAATCATACGAATCGAGTTCCATTCGCGCAAAAGCATATGAAAGATGGAGAGGTGGTTAAAGGGGAATTTTCAGTTGACAGCAACCCAGTAAGCAATTTAGATTTCGCCGCAATGGTAGCCGAGGCTTGCGAAggaatttttgatgaaatcgaaAACGACTTGAGAGCATACAATAACAATGGCAATAATAACAGCTGTCatgataatgaaatattttctgattctGTATGTGATGGTGAGGAGCGTATTGTGAAGAGAAAAAAACGAGCGCATAACTCGGAAGCGGTACAACTTGCAGCAAATGCCGTATTGGACGGTCGTATGAGTTTAGGGGAGGCTGCTAAGTGTTATAATGTTGTGCGTTCAACCGTATCTTCTCGTGTCGCCAAACATCCAAAACGTAAAAGACGAAAATCGAATAAGGAATTAGAGGAACTAATTTACAGTAAACTGAAGGCCGGTGTGCAAATTTCGGAAATTTCGCGCTCTTTACATGTTCCTAAGTCAACTGTTCACTTATATAAAACAAGACTGAAGAATAACGGATTGTTGCCCGCTGTTTGGATTAGGAATGGCAGTAAAGATATGGTTGATCATGGTGTTCAAGAGAGGTTAACGCAAGCATATCGTGGTCATATTGTAAACGGAATGTCGGTACGTTTCGCTGCTGAGTTTTTCTCGTTACCGCTCACAACCTTATGGCGATACATAAAACGCAGGAAAGGTCCCACAGTGAATGACATTGACGATGAcattaacaaatttgaaaatgaagaaTCCACTGAGAAAAAAAGTTGTGTTAACAACGCTTCAAATGACTTTGAAGAGAATCTGcatattaatgaaatgaaatcaccTCGATCATATCCTACAGGACTGGgaacagtttttgaaaaagaagaacAAACGATAGAACAATCTTTATTAAATCAACTGTTAGAGTGA
- Protein Sequence
- MSEVENNQETNGTNNGDVPEIELIIKEEFMLENEIVGNANELNINRIAVGDGLNDVDEKENIVKSNLQLKQLQHQQHIKECRTTTTEKSFALRKDAFAKWGNEFSDGGHVLMLTHHDNQHFHFEYVTPKQDENMLDKISVVEQHTKCFQTDEKLNSEKLAINHTNRVPFAQKHMKDGEVVKGEFSVDSNPVSNLDFAAMVAEACEGIFDEIENDLRAYNNNGNNNSCHDNEIFSDSVCDGEERIVKRKKRAHNSEAVQLAANAVLDGRMSLGEAAKCYNVVRSTVSSRVAKHPKRKRRKSNKELEELIYSKLKAGVQISEISRSLHVPKSTVHLYKTRLKNNGLLPAVWIRNGSKDMVDHGVQERLTQAYRGHIVNGMSVRFAAEFFSLPLTTLWRYIKRRKGPTVNDIDDDINKFENEESTEKKSCVNNASNDFEENLHINEMKSPRSYPTGLGTVFEKEEQTIEQSLLNQLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192744;
- 90% Identity
- iTF_00193487;
- 80% Identity
- -