Bole013542.1
Basic Information
- Insect
- Bactrocera oleae
- Gene Symbol
- Hr39
- Assembly
- GCA_001188975.4
- Location
- LGAM02027709.1:795729-867549[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.23 2.4e+03 -2.2 0.0 149 184 43 78 29 89 0.71 2 4 0.17 1.7e+03 -1.7 0.7 132 186 202 254 48 269 0.49 3 4 2 2.1e+04 -8.6 9.9 106 148 325 366 212 454 0.55 4 4 1.1e-96 1.2e-92 311.7 10.9 1 408 549 924 549 924 0.88
Sequence Information
- Coding Sequence
- ATGTCCTCCACTAAGGCAGAGAGCGCCGCTGGCGCCAATCCCACATTGGCGGCATTTGGCTCAACGCTGGCCGGGAGTGCATTCCAGCTGCCCGTGAATATGCATAACCATGCACAACTTGCTACGAATGGCAGTAACGTACACAGTACGAATGGCACAACTAcaaccaccacaacaacaacaacgcgcaaCAATATCTCCGTTACGAATATCAAATGCGAAATGGATGAGGGTGTTGTGGCAACACTAATGCCCAACGGCAACAATATAGTGCCTGTCATCGCCACAACGGGCGCTGCTAGCTATTATAACGGTGCTAGCAGCGGTGGCTTGGGTATACGCATACCAGTGACGAAAGCAGAAGATTCTGATTCTGAAGCTGAGTTGacgaatattgaaaatttaaaagtgacGCGACGAGCGCACAACAATGCCGACAGCAGCAGTGGCACAATGAGCACGGGGGGTGTGGTCAGTATTGGCGGCAACGGTAACGCCAATGGAAATCACAATAAGAATGGGCCGCGACCCATGTCATGGGAGGGTGAACTCTCTGAAACGGAGACGACTGAAACGGAACTCATGGAGACGGAGAACTCTTTGAGTAACAGTGGCGTGGCGACACACAATTTCAACGCAACAAGCATAGGTGTGGCGGTGATTAAGAAGGAGGCGACCACAACAACGCCAGGACACACATTGGCGCCAACGCCTACGCATCCCCTAAAGCCCGAGCAAATGGAACAGGTTTCCGTTGAAGTGCATGGTGGCGCATTAGCTGGTCTGGGTTCCACACTGCGCAGCGGTTTAGGCAGCAGCAGTAGCGCGGGTAGTCTTTATTCCGCCACACATACAAAGCTGGCGCCCACACAAAGTGATCCCATCAATTTGAAGTATGAACCcgatgctgctgctgctgcaggtTTAATGCCTACTGGAGCTAATGTTAATTCGCCGCTTTTGACACGCAACAAGTCTGCTACATTGCCCCTGCCTGCCAATCCCAGCCCCGATTCTGCCATACATTCCGTCTATACGCACAGCTCACCGTCGCAGTCACCGTTGACCTCGCGTCATGCGCCCTACACACCTTCGCTCAGTCGCAACAATAGCGATGCATCGCATAGCTCTTGCTACTCCTACAGCTCAGAGTTCAGCCCGACACATTCACCCATACAGGGTAGACATGCGCCACCGGCGCCAGCACTCTATGGCAACTTCAATGGTTCGTTGCATCATTCGGTGATCTATCGGCCCATCTCGGTATCGGATAGCGCTGCCAGTGGTGTGACTGGTAACGGTAATGCCGGCGGTAACTGCAGTGCAGAAGCGCAAAATCTTAGCATGGACACAAAGGTTTCACCACTGAATATCGGTCTGGAAGGTTTGCCAGCTTCACCGGCTGGTATTTCACGTCAGCAGCTCATCAATTCGCCGTGTCCGATTTGTGGCGATAAAATCTCCGGCTTCCATTATGGTATTTTCTCGTGCGAATCTTGTAAGGGCTTCTTTAAGCGTACCGTACAGAATCGAAAAAactatgtgtgtgtacgtggCGGTCCGTGTCCAGTTAGTATTTCGACGCGTAAAAAATGTCCCGCCTGTCGTTTTGAGAAATGCCTGCAGAAGGGCATGAAGCTCGAGGCAATACGTGAGGATCGTACGCGTGGCGGACGTTCTACATACCAGTGCTCATATACACTGCCCAACTCGATGCTGAGTCCGTTAATGAGTCCGGAGCAGCAGGGTGTGGCGGCGGCGGTTGCAGCAGCTGCAGCGGCTGCTGctaatcagcaacaacaacagcatgggCGATTGGGTGCGCAAATGGCTCATTCAATgtgcgcacaacaacaacatcatacGTTGAACGGGCTGTCAGCGGGTCTCGGCGCTGCACAATCCATAATCAAGTCGGAGCAATGCGACGAAAGTAGCGCCTCAGCGCGTACAACAAACATTCCAACGCTGTTGCAGGAAATCATGGATGTTGAGCATTTGTGGCAATATAATGAAGCGGAATTGGCACGTCTTAATCAACCGATCTCAACATCGTCTTCATCTTCTTCCAATGCATCTTCGTCTTCATCATCAACAGCGTCCGCAGGTAGTACTGCAACCGGTAATCCACAAATGACAAACCCACTATTGGCCAGCGCAGGTTTTGGCAATGGCGAAAACACCAATCCCGATCTGATTGCACACCTGTGCAATGTGGCCGATCATCGGCTGTATAAGATCGTAAAATGGTGCAAGAGCTTGCCACTCTTCAAGCATATTTCGATCGACGATCAAATCTGCCTGCTCATCAATTCGTGGTGTGAGTTGTTGCTCTTCTCGTGCTGCTATCGTTCGATCGATACGCCCGGCGAAATCAAAATGTCACAAGGCAAGAAGATTAGCTTGGCGCAGGCGAAATCAAGTGGCTTACAGGCCTGCATTGAACGCATGTTGAACATGACAGAAAATTTGAGACGTTTGCGCGTCGATCGCTATGAATATGTTGCCATGAAAGTGATTGTGCTGCTACAGTCGGACACCAGTGAATTGCATGAGCCCGTCAAGGTGCGCGAATGCCAGGAGAAGGCGCTGCAGGCCTTACAGGCCTACACGCTTGCGCACTACCCAGATACGCCGTCGAAATTCGGCGAGTTGCTGCTGCGCATACCAGATCTACAAAAGACCTGCcagCTTGGCAAGGAAATGCTCACCATTAAATCACGGGACGGCGGTGATTTCAATTTGCTTATGGAATTATTGCGTGGAGAGCATTGA
- Protein Sequence
- MSSTKAESAAGANPTLAAFGSTLAGSAFQLPVNMHNHAQLATNGSNVHSTNGTTTTTTTTTTRNNISVTNIKCEMDEGVVATLMPNGNNIVPVIATTGAASYYNGASSGGLGIRIPVTKAEDSDSEAELTNIENLKVTRRAHNNADSSSGTMSTGGVVSIGGNGNANGNHNKNGPRPMSWEGELSETETTETELMETENSLSNSGVATHNFNATSIGVAVIKKEATTTTPGHTLAPTPTHPLKPEQMEQVSVEVHGGALAGLGSTLRSGLGSSSSAGSLYSATHTKLAPTQSDPINLKYEPDAAAAAGLMPTGANVNSPLLTRNKSATLPLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHAPPAPALYGNFNGSLHHSVIYRPISVSDSAASGVTGNGNAGGNCSAEAQNLSMDTKVSPLNIGLEGLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLMSPEQQGVAAAVAAAAAAAANQQQQQHGRLGAQMAHSMCAQQQHHTLNGLSAGLGAAQSIIKSEQCDESSASARTTNIPTLLQEIMDVEHLWQYNEAELARLNQPISTSSSSSSNASSSSSSTASAGSTATGNPQMTNPLLASAGFGNGENTNPDLIAHLCNVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCYRSIDTPGEIKMSQGKKISLAQAKSSGLQACIERMLNMTENLRRLRVDRYEYVAMKVIVLLQSDTSELHEPVKVRECQEKALQALQAYTLAHYPDTPSKFGELLLRIPDLQKTCQLGKEMLTIKSRDGGDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00082980;
- 90% Identity
- iTF_00192869; iTF_01562963; iTF_01562930; iTF_00191414; iTF_00191393; iTF_00189988; iTF_00190730; iTF_00190704; iTF_00193625; iTF_00193595; iTF_00190013; iTF_01563837; iTF_01563812;
- 80% Identity
- iTF_00192869;