Belo028973.1
Basic Information
- Insect
- Baccha elongata
- Gene Symbol
- Hr39
- Assembly
- GCA_951217065.1
- Location
- OX578272.1:93151065-93157015[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.5 9.8e+03 -2.7 0.9 52 97 37 82 7 172 0.49 2 4 1.4 2.7e+04 -4.2 8.3 53 152 221 325 184 354 0.42 3 4 1.4e-15 2.7e-11 45.2 2.6 1 155 448 591 448 599 0.66 4 4 3.2e-78 6.2e-74 251.5 0.2 200 408 595 796 584 796 0.96
Sequence Information
- Coding Sequence
- ATGTCATCATCAATAAAAAGCGATTCATCCGCATATAATGCGGCCCACGGCAGCACCATCACTAACATCGTTGGAGTCCAACAATCATCATCGACAACATCATCTATCATTCGTAACAATGTATCGGTGACTAACATCAAATGTGAAGAAGATCGAAATAGTAGCAGTCCACTTCGGACAACACATCCATCATCTATTGTAACAACATCCTATTACAATCAAGGCACTGGATCCATTCGGATTCCAGTTAGTAAAAGAGAAGAATCTGATTCTGAGAGTGAACTGACGCACATTGAAAATCTCAAGGTCAATCGACGGTCGGTGAGTCATTCTGTTAAAAATGGTCCGCGACCAATGTCGTGGGAAGGAGAACTTTCCGATAACGAACTAGATCCAATGGATACTGAAAATTCGACCAGTTGCGACAAGAACTTTTCCAGCGCTCCAGTGACTGTGATCAAAAATGATCCAGACCGTAAGCCGATGCTCGATCAGATATGCCTCGAGATAAATTCATCGCATTACATTAGCAAGAAGCCACAGAGTGATCCTATTAACCTTAAGTATGAGCCAGGACTTCTGGCTGACCCCACCGGCACTAGTAACTCGCCATTGCTTGCACGTTCCAAGACGCAAACCAATTTGTTGCCTGCCAATCCTAGCCCCGATTCTGCCATTCATTCCGCGTATACGCACAGTTCACCAAGTGAGTCACCTCTAACATCCCGACACGCCCCCTACACTCCCTCACTGAGTCGCAATAACAGTGATGCATCGCATAGCAGTTGTTATTCCTATAGCTCGGAATTCAGTCCAACACACTCGCCCATCGCTGGCCGCCACAATATGTACGGCAACTACAGTGGCTCACTTCATCATTCCGTTTTGTATCGTCCTTCCATTTCTGACAGCGGCAGCAGTGCTGCCAGTTGCTCATCTTCGGATCCACAAAATCTTTCACAATCACAAGCCGCTGTTGTGGCAGCGGCGGCGTCTGCGCTGGCCGCAGCCTCGTCTACATCAATTTCGGTAAATGGTGCCACTCCACCTGGGCTGAAAACCGAAGAATTGCTCTTCGACAGTGAAGCGATCCCATCGGCGGGCATCTCCCGACAGCAACTAATTAACTCACCGTGTCCCATTTGTGGTGACAAAATCTCTGGCTTTCACTATGGAATTTTTTCATGCGAGTCCTGTAAAGGCTTTTTCAAACGGACTGTACAAAATCGCAAGAATTATGTTTGTGTACGTGGTGGACCATGTCCAGTGACCATCTCCACCCGCAAAAAATGTCCGGCATGTCGCTTTGATAAGTGTCTGCAAAAAGGCATGAAACTCGAGGCGATTCGCGAAGACAGGACTCGCGGTGGACGCTCTACGTATCAGTGTTCGTACACACTGCCCAATTCTATGTTAAGTCCATTGCTTAACAACGACCAGTCAagtcagcagcaacaacaacaacagcagcaacaaggTGGCTCTTCTCGCATGGGAATTAATGGCTTTGTCATCAAAACAGAACAACCAGACAGCAGCACGGGTGGAACATCTACTCCAACACCAGGAAGTAGTAACTATCAGCGTTCCACAAGTCACGAAATCCCCACCCTGCTACAAGAGATAATGAACGTTGAACATCTGTGGCAGTACAATGCAACTGAGTTGGCACGACTGAATCAACCGTTGTCGGCGTCTTGTTCGTCTTCAACGGCGGCGTCGACATCGGCGCCGTCTGGTAATATTGCGTCAAATCCGCTGCTGGCCAGCGCTGGTCTCTCATCGAATGGAGAGAATGCAAATCCAGACTTAATCGCCAACCTGTGCACAGTTGCTGATCATCGATTGTTCAAAATCGTTAAATGGTGCAAAAGTTtaccactttttaaaaatatttctattgATGATCAAATTTGCCTGCTTATCAATTCGTGGTGTgaacttttattgttttcatgttGTTTCCGATCGATTGATTCACCAGGTGAGATCAAGATCTCACAAGGAAAGTCAATAAACTTGGCTCGGGCGAAGTCGAGTGGTTTGCAGTCTTGCATTGAACGAATGCTCAATCTGACAGACCATTTACGACGATTACGAGTCGATCGATATGAATATGTTGCCATGAAAGTGATCGTTTTACTTCAATCAGATACATCAGAATTAACTGAACCAGTTAAAGTTCGTGAGTGTCAAGAGAAAGCTTTGCAATCTCTTCAAGCATACACCTTAGCCTTTTATCCCGATATGCCATCAAAATTCGGTGAATTGCTCTTAAGAATTCCAGAACTACAAAGAACATGTCAGcttgGCAAAGAGATGCTTACCATAAAATCTCGTGATGGTGGTGATTTCAATTTACTTATGGAACTTCTTCGCGGAGAACATTGA
- Protein Sequence
- MSSSIKSDSSAYNAAHGSTITNIVGVQQSSSTTSSIIRNNVSVTNIKCEEDRNSSSPLRTTHPSSIVTTSYYNQGTGSIRIPVSKREESDSESELTHIENLKVNRRSVSHSVKNGPRPMSWEGELSDNELDPMDTENSTSCDKNFSSAPVTVIKNDPDRKPMLDQICLEINSSHYISKKPQSDPINLKYEPGLLADPTGTSNSPLLARSKTQTNLLPANPSPDSAIHSAYTHSSPSESPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIAGRHNMYGNYSGSLHHSVLYRPSISDSGSSAASCSSSDPQNLSQSQAAVVAAAASALAAASSTSISVNGATPPGLKTEELLFDSEAIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLNNDQSSQQQQQQQQQQGGSSRMGINGFVIKTEQPDSSTGGTSTPTPGSSNYQRSTSHEIPTLLQEIMNVEHLWQYNATELARLNQPLSASCSSSTAASTSAPSGNIASNPLLASAGLSSNGENANPDLIANLCTVADHRLFKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDSPGEIKISQGKSINLARAKSSGLQSCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELTEPVKVRECQEKALQSLQAYTLAFYPDMPSKFGELLLRIPELQRTCQLGKEMLTIKSRDGGDFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311850;
- 90% Identity
- iTF_00694670;
- 80% Identity
- iTF_00188226;