Basic Information

Insect: Augochlorella aurata
Gene Symbol: -
Assembly: GCA_028455555.1
Location: CM052150.1:3693464-3697721[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 9 7.3e+02 0.9 0.1 3 17 60 74 59 75 0.91

2 22 1.1 89 3.8 6.0 2 23 243 265 242 265 0.96

3 22 0.02 1.6 9.3 2.0 1 23 312 334 312 334 0.97

4 22 7.5 6.1e+02 1.1 2.8 1 23 383 405 383 405 0.94

5 22 0.031 2.5 8.6 0.2 1 19 461 479 461 481 0.94

6 22 9.2 7.5e+02 0.9 4.5 1 23 494 517 494 517 0.81

7 22 0.00034 0.028 14.8 0.3 1 23 522 544 522 544 0.94

8 22 0.0018 0.14 12.6 0.1 1 23 592 614 592 614 0.97

9 22 0.00063 0.051 14.0 0.1 1 23 620 642 620 642 0.97

10 22 2.5e-06 0.0002 21.5 0.3 2 23 686 708 686 708 0.96

11 22 0.072 5.8 7.5 1.0 3 23 717 738 715 738 0.89

12 22 1.6e-05 0.0013 19.0 0.3 2 23 746 768 746 768 0.97

13 22 6.2e-05 0.0051 17.1 0.1 1 23 776 798 776 798 0.94

14 22 0.029 2.4 8.7 0.4 1 20 858 877 858 877 0.97

15 22 0.00026 0.021 15.2 0.1 1 23 895 917 895 917 0.98

16 22 6.4e-05 0.0052 17.1 0.9 1 23 935 957 935 957 0.97

17 22 0.00064 0.052 13.9 6.9 1 23 979 1002 979 1002 0.94

18 22 0.0093 0.76 10.3 1.6 2 23 1062 1084 1061 1084 0.95

19 22 0.23 19 5.9 1.1 3 23 1120 1141 1118 1141 0.90

20 22 0.0082 0.66 10.5 0.4 1 23 1148 1172 1148 1172 0.95

21 22 0.0031 0.26 11.8 1.2 1 23 1177 1200 1177 1200 0.97

22 22 0.043 3.5 8.2 2.3 2 23 1230 1252 1230 1252 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	9	7.3e+02	0.9	0.1	3	17	60	74	59	75	0.91
2	22	1.1	89	3.8	6.0	2	23	243	265	242	265	0.96
3	22	0.02	1.6	9.3	2.0	1	23	312	334	312	334	0.97
4	22	7.5	6.1e+02	1.1	2.8	1	23	383	405	383	405	0.94
5	22	0.031	2.5	8.6	0.2	1	19	461	479	461	481	0.94
6	22	9.2	7.5e+02	0.9	4.5	1	23	494	517	494	517	0.81
7	22	0.00034	0.028	14.8	0.3	1	23	522	544	522	544	0.94
8	22	0.0018	0.14	12.6	0.1	1	23	592	614	592	614	0.97
9	22	0.00063	0.051	14.0	0.1	1	23	620	642	620	642	0.97
10	22	2.5e-06	0.0002	21.5	0.3	2	23	686	708	686	708	0.96
11	22	0.072	5.8	7.5	1.0	3	23	717	738	715	738	0.89
12	22	1.6e-05	0.0013	19.0	0.3	2	23	746	768	746	768	0.97
13	22	6.2e-05	0.0051	17.1	0.1	1	23	776	798	776	798	0.94
14	22	0.029	2.4	8.7	0.4	1	20	858	877	858	877	0.97
15	22	0.00026	0.021	15.2	0.1	1	23	895	917	895	917	0.98
16	22	6.4e-05	0.0052	17.1	0.9	1	23	935	957	935	957	0.97
17	22	0.00064	0.052	13.9	6.9	1	23	979	1002	979	1002	0.94
18	22	0.0093	0.76	10.3	1.6	2	23	1062	1084	1061	1084	0.95
19	22	0.23	19	5.9	1.1	3	23	1120	1141	1118	1141	0.90
20	22	0.0082	0.66	10.5	0.4	1	23	1148	1172	1148	1172	0.95
21	22	0.0031	0.26	11.8	1.2	1	23	1177	1200	1177	1200	0.97
22	22	0.043	3.5	8.2	2.3	2	23	1230	1252	1230	1252	0.94

Sequence Information

Coding Sequence: ATGGACAAGGTGGTGGTGTTGCAAAGAATGGAGAATGTGTGCAGGCTTTGCCTCTCCGAAGATGAGCCGAAATTGTCGGTGTTCGGGGCGCAAGAAACTCCGGTATCACTGGCCACTAAGATACAAGCCTGCCTATCGATTCAGATTTTAGCCACGGACAGGTTGTCCACGCAGATATGTTCACAGTGTGTTAAAAATGTGAATCAGTGGCATAATTATAAGGAGACTTGTCTTCGTTCGCAAGATAAGTTACACCAATGGTTGGAAAAACATATACAATCTAGCCCAGTGGTTGTGACTATCAAAGATGAACCTGTAGATCTAGACTTTTACGAAGACAATGTTGAGGTCATTTCGGAATCTTCCATCGCATCAGAACTAGAGTCTACTAATCTTGACGAAAGTATGGATGACTCCGCAAACATGCTTCATATCCAAGAGATAAGCGATGATGGAACGGATGATGCAAGAGTCCAACCAGCGTTAACAAAACCTTTTGATGCATGTATAAAGACAGAGCCACCAGAGGACTGTGATACAGATTGTACTATAGAGATAGAGTCGATTACTGGCAGTGAGTTGGTGTTAAACCCCCTTTCAAACAAGGAAGATAGAATCATGGAAGCTGATTCTACGCAAAAGTCTAATGCGTCAGCATCAGCGTCTAAGAAGAAACTTAGAAGAGGTCCTCATACTCATTACAGGGGACCACGTGCATTTAAGCAAAAGTGTGTGCATTGTCAAATCTTTTTGCATTCTAAATATACCTACACAAAGCATATGGAACGATTTCACTCTGAGAAGCAAAATGGTAATGCCGATGACCAGGTGAAAGTTGAAGAAGTTGAAGATCTCGAAGATGAGCTAATGAGTATGGAGAAGGACGCGCCTCTGTCTCAGGTGCAGCAGAATATAATCTGTCAACTGAAAACGTTTTCGTGTTATTCCTGTCAGCAAGTGTTCAGCGACCGCAGAACTACGCTTTCTCATATTCGACAGCACATGCCGGACTTGAGACCGTATACGTGTATTGCATGTTTAACCGAGTTCCCTGATCGCTCGATGTACAAGCTGCATTGCGGTGCGTCTTTTGAGTGCGCAATGAAAATCGCTCTAGTGATACCAAACCAAGGGGAGGAGAAATATTTCACATGCAACATGTGTCTGCGCTCCATGCCAAACAGAAAGGATTTGCTCTGCCATCTTTCAAAACACTCTGATAAACAGTACCAACAATTAGTCAAGCCGTCGCGATCGCCTCCTAAACTCAAACCAATTTCACCTCTACCAGCTGCTAAACAAGAGACCCCTGCAAAGAAATCAATTGGAAGCACTCCGGATGTCCCCCATCCATACAAAAACGGGGACCCAGCACACAACCATGTCTGCGATTTATGCGGCATGATTTACAGATACAAGCCTAACATGTTAAAGCATAAAGACTTGTGTCAGCGTTTACAGCCGGATCTTCGAATCTCCTACAAATGTATGCACTGTGGAATGACCTATCTGGTGTTCAAGAAGTTCCACAACCATATCACTCAAGACCATAAAAAGAAAGACTTTTCCTGTTCCGAATGTGGCGCTAAATTTAGATCTCCTAGCGAATACTTAATGCATTATGATGGACATCGTGGCAAAATAAATAAAAAGCCAGTATTGGAGAAGAACGAACCAACTGCTAAGGGTGCGCAGAACTTCTCAACGCCTATCAAAGATTGGGACACGTTTGAGGCCGAAATGAACGACGGAAGGTTATCCGATAGCAACCAGTACAGCTGTGCATTGTGTAGTTTGGAATTTGCTACTAGAGCCGAGCTGACGGAGCACAGGAACCTTCACCTAAAGGTGAAGATTTATTCTTGCGTTATCTGTCGCAGCATGTTCAGCAGTGCGGGCGCTTTGGAGATCCACATGAAGGATCACGGCATAGAGGACCCCGGCGAGAGAAATGCCAACAGTTCGTGCGTAGAATACGGAACTTTAAACGACAGTTCAGAAGATTGTAAACCGCTGAATATCAGCGCCACCTCAGACCCAGGCGCTAATAAGAACGAGTGCCGCGAATGCGGCAAGGTATTCTCGAATTACGCGAATGTCAGACGACACATACGTAACATCCACAAGTCGAATAAGTATCGCGTGATTTGTCCTCAATGCCCCCGGAAATTTAAGAGCAAGGAGATCTGCAACAGGCACATTGCGACCGAGCACAAAACCGGCAAGACCATGCGCCAGTGTCCCCAGTGCCCGAAGAGCTTCGTCTTCCAAGCGAACTTGAACCTTCATTTCCAGACCGCTCACAAGAACAAGAAAATCGGTGGCTACCAGTGCGACATATGCGGCAAGACGTTCCAAGAGGAAGCGTCCCTCAAAATACACCGGGGATGGCACAACAGAACGAACTCCCGGCTGAGCTTGCGGAAAGCACCGGCAATCGAAGTAGACCGAAAAATGGTCAAGGACCCATTGGCGATTAAACCTGAGGAAATATACATCGCCAGCCCTGACAAACCAGCCAGAGCCAGGAAATCGTTCCCTAACACACCACCTGTGAAACCCGAGGGTAAATTCCAATGTCAGGTATGCAACGACAAGTTCAACGATGTCACCGAGCTGAGGAAACACTTGTGGGACGTACATTGCGCCCACAAAACCGAGAAAACGTTCACAAGCGAAGAATACACCTGCGACATCTGCAACAACATCTACTCCGACAAAGAGACGCTGGACATTCATATGAATTGGCACAAGTCGTTCACGAGCCTCAGTCGTGTCAGGAGAGCTAGGAACCAGGGCAACTTCCCTTGCGACGTCTGCGGGAAATTCTACAGTTCGAAGAAGGTGCTATGGAGACACAAGAAGCTGCACAAAGCGACCAGCCTCGCCGCCGCTACTCTGCAATCGGCGAATAGAAAGCCGATGCCGAATCAGCATATTTGCACCGTTTGTCACAAGATCTTTTGCAGCAAACAATCACTGCAACGTCACAGGATGAACATCCACAGCGAGATGTCTACCCAGCTGCAGCAGCAGACAATGTTCTCCAACAAGAGGAGAATGTCTCAGGAAGAGCCTATCTCGAAGAAGATGAAACTGGAGGAGAATGTGGAAGAGGAAGAGGAGATCCTGGAGAAACCGAACGTGGTCCTAAACACGGTAGCTGGCGGTAAGAAGCCAGTGATGTGCCACGTTTGCAGGAAGTTCTTCGCGAACATGAGCGTGTTGTACAAACATAAGCAAGTGATGCATAGCAAGTCCCGGCTGATGAAGGCCGCGCCGAAAGCCCCCGTGCCCGCGACCACGTCCACGATCAACCAATGCATTCCGGTGCACGGATCCGATGGCAAGGTCTGCTGCAACATCTGCTACAAGGCGTTCAACGCCATACCCAGCTTGCGCCAGCACTTCACCATCAAGCACAAGAACACTCCACCAAAGTTCGCGTGTCACATCGACGGATGCAAGATGATATTCCCGTCGTCGGCGACCCTGAGGAATCACGAAACGTCCCACAACAACACGATCTTCAACTGCAACCTGTGCGGTCGCCATGTGTTCAACAAGCAAGCGATGACCGACCACATGCTGACGGCGCACAACACCGTCTACGACGCTGAAAAGAGCAAGAACTTCCACCGGGAGACAGACCTGACGCTCTACGTGGTGGAGAACGCGGTCGACGCGACTTGCCCCCACTGCAAAATCAAGTACCCCAACAATAGAGCCATGAAGATCCATTACTTCAAGTTCCACGACTACGCCAACTAA
Protein Sequence: MDKVVVLQRMENVCRLCLSEDEPKLSVFGAQETPVSLATKIQACLSIQILATDRLSTQICSQCVKNVNQWHNYKETCLRSQDKLHQWLEKHIQSSPVVVTIKDEPVDLDFYEDNVEVISESSIASELESTNLDESMDDSANMLHIQEISDDGTDDARVQPALTKPFDACIKTEPPEDCDTDCTIEIESITGSELVLNPLSNKEDRIMEADSTQKSNASASASKKKLRRGPHTHYRGPRAFKQKCVHCQIFLHSKYTYTKHMERFHSEKQNGNADDQVKVEEVEDLEDELMSMEKDAPLSQVQQNIICQLKTFSCYSCQQVFSDRRTTLSHIRQHMPDLRPYTCIACLTEFPDRSMYKLHCGASFECAMKIALVIPNQGEEKYFTCNMCLRSMPNRKDLLCHLSKHSDKQYQQLVKPSRSPPKLKPISPLPAAKQETPAKKSIGSTPDVPHPYKNGDPAHNHVCDLCGMIYRYKPNMLKHKDLCQRLQPDLRISYKCMHCGMTYLVFKKFHNHITQDHKKKDFSCSECGAKFRSPSEYLMHYDGHRGKINKKPVLEKNEPTAKGAQNFSTPIKDWDTFEAEMNDGRLSDSNQYSCALCSLEFATRAELTEHRNLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIEDPGERNANSSCVEYGTLNDSSEDCKPLNISATSDPGANKNECRECGKVFSNYANVRRHIRNIHKSNKYRVICPQCPRKFKSKEICNRHIATEHKTGKTMRQCPQCPKSFVFQANLNLHFQTAHKNKKIGGYQCDICGKTFQEEASLKIHRGWHNRTNSRLSLRKAPAIEVDRKMVKDPLAIKPEEIYIASPDKPARARKSFPNTPPVKPEGKFQCQVCNDKFNDVTELRKHLWDVHCAHKTEKTFTSEEYTCDICNNIYSDKETLDIHMNWHKSFTSLSRVRRARNQGNFPCDVCGKFYSSKKVLWRHKKLHKATSLAAATLQSANRKPMPNQHICTVCHKIFCSKQSLQRHRMNIHSEMSTQLQQQTMFSNKRRMSQEEPISKKMKLEENVEEEEEILEKPNVVLNTVAGGKKPVMCHVCRKFFANMSVLYKHKQVMHSKSRLMKAAPKAPVPATTSTINQCIPVHGSDGKVCCNICYKAFNAIPSLRQHFTIKHKNTPPKFACHIDGCKMIFPSSATLRNHETSHNNTIFNCNLCGRHVFNKQAMTDHMLTAHNTVYDAEKSKNFHRETDLTLYVVENAVDATCPHCKIKYPNNRAMKIHYFKFHDYAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00183438;
90% Identity: iTF_00183438; iTF_00966173;
80% Identity: -