Aaur001799.1
Basic Information
- Insect
- Augochlorella aurata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_028455555.1
- Location
- CM052159.1:298360-300522[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.9e-114 1.7e-109 365.7 34.4 1 300 29 327 29 327 0.97 2 3 0.0025 43 3.2 3.0 122 171 327 376 325 380 0.92 3 3 0.059 1e+03 -1.3 5.8 195 238 359 401 346 402 0.57
Sequence Information
- Coding Sequence
- ATGGAGGCTGCTATAGCTGGACGTAGGCGGACCACCGCAAGGCATTCGGCAGAGGATCAAGCACTTGATCAGATAGCCAAGGAGGCAGAAGCTAGATTAGCTGCAAAGAGACATGCAAGAGCTGAAGCAAGAGAAATACGAATGCGTGAATTAGAAAGACTACAAAAAGAGGCAGAAGAGAATGCGGATAGAGTTTATGACATGTGTTCGGCCGACGTTAATAGGACAATGAGAGTAACTCCAGACTCTGTAAGGACGACGCGTCTCCTTACGAATTCCAACAATTTTCAATCCAGTCGTAGGTCTTCTGAAGACTCTTTAGAAGATGCAGGCCTAAGTAGAGATCTCAGGTTAGAACTGAAGGAGTTTGAAGAAAAATTTAGGAAGGCTATGATAGCCAATGCTCAGTTAGACAATGAAAAGTCTTCTTACGCCTATCAAGTTGATTTATTGAAAGACAAGTTGGAAGAATTAGAGGAAACAGTTGCACAACTTCGTAGGGAACTTAGAGAGAAGAATCGAGAATCCGAACAGTTGAAAAGAATCAGTCAAAGATTGAAAGAAGATTTAGATATATGCCATGCACAATTAATAGAAAGAGATACGCTTATACGAGAGAATGGTTTAGTTATTCTTGATGATGAGGAGAGTGAAAACGAAGATAACGATATTGAAAACGGTCCGCGTCCAAGACGAAGAGTACTAGTCAGTACAGAAGCAGCAGAGTTGTTGCAAAATGCTGGGAAAGGTTCATTAGATGTTCGACTGCGAAAATTCGCTTCTGAAAAAAAGGAATTACAAGACGAAATTCGGCATTTAAGATTGGAATTAGAAGAAACCAGGAATCGCATTAGATCAGAAAAATCACCTGGTTCAGTATTAGGTTGTTTATCAGATTCCGAGGACGTGCAACGAGAAGCGAATAAATTGTTAGCCGATTACAAGTTCAAGTTACAAAAAGCAGAGCAGGACATGTCGACTTTACAAGCCACTGTAGCCAGGCTAGAGAGTCAAGTAATACGTTACAAATCAGCCGCAGAAGCGTCAGAGAAGGCGGAAGACGAATTAAAAGTTGAAAAACGAAAACTTCAAAGAGAAGTCAGAGAGACCCAAGGCCGCGTCGAAGAATTAGAGACTGCAAATTCACATTTACAAAGGCGACTAGACAAACTTAAAAATGCAAAATCGGCTCTATTGAAAGAGCTTTGA
- Protein Sequence
- MEAAIAGRRRTTARHSAEDQALDQIAKEAEARLAAKRHARAEAREIRMRELERLQKEAEENADRVYDMCSADVNRTMRVTPDSVRTTRLLTNSNNFQSSRRSSEDSLEDAGLSRDLRLELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETVAQLRRELREKNRESEQLKRISQRLKEDLDICHAQLIERDTLIRENGLVILDDEESENEDNDIENGPRPRRRVLVSTEAAELLQNAGKGSLDVRLRKFASEKKELQDEIRHLRLELEETRNRIRSEKSPGSVLGCLSDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREVRETQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00966027;
- 80% Identity
- -