Basic Information

Insect: Augochlorella aurata
Gene Symbol: ttk
Assembly: GCA_028455555.1
Location: CM052161.1:1971423-1973734[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2.4e-06 0.0044 16.6 0.0 3 38 201 236 199 242 0.77

2 5 4.9e-11 9.2e-08 31.6 0.0 5 39 253 286 250 292 0.90

3 5 0.092 1.7e+02 1.9 0.0 21 34 320 333 306 338 0.81

4 5 1.5 2.8e+03 -2.0 0.0 32 45 348 362 348 362 0.89

5 5 1.5e-11 2.8e-08 33.2 0.1 4 39 364 399 361 404 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2.4e-06	0.0044	16.6	0.0	3	38	201	236	199	242	0.77
2	5	4.9e-11	9.2e-08	31.6	0.0	5	39	253	286	250	292	0.90
3	5	0.092	1.7e+02	1.9	0.0	21	34	320	333	306	338	0.81
4	5	1.5	2.8e+03	-2.0	0.0	32	45	348	362	348	362	0.89
5	5	1.5e-11	2.8e-08	33.2	0.1	4	39	364	399	361	404	0.92

Sequence Information

Coding Sequence: ATGTCTGAAGTTGTTGCTCAACATGAAATTAATCAGAGCTATTGTTTCAAATGGAATGATTATCACAGTCACTTATCTGATGTAGTTAGACAACTTTTGGAGGAGGATTGTATGGTGGATGTAATACTGGCAGCTGCTGGAGAACGCATTCATGCCCATCGTATAGTTCTCTGCGCTTGTAGTACTTTGTTTCGAGATGTTTTGAGTCAAGTAAACGAAGACCATCCAACGATAATACTAAGTGATATATCAGCACAAGATATCAAATCTATCGTTGAATTTATTTATCATGGAGAAGTACGAGTAGCAGTGGAGAATATTAGCAGTTTATTGGATGCCGCACGTTCCTTGAAAATATGTGGTCTCATTGAGATCAATGGGCTCAATGAAATTCACTCGGTCGCGGGTACTAAGGACTACAATGATAACAGCGAGGAGCCAATGACTGTAATTAATGAAACAGACGAAAATGTTATGAATGCATTACAGTATGGGTACGAAGATCTGGAAGATCAGCAAGAACAGAGATTTTCTGAGAATTCTTCAATGATTAAAAAAAAGAAACGCAGGCGTGACACAATAAAAAGAGAGTACAGCGACGACATGTTAGCATCCGCGATCGATGGCTTGAAATCAGGGCAAACGTTAATAGAAGCTTCAACTAAACACAATGTACCACGTTCAACGTTGTACATGCGTGCAAAGGCTTTAGGTGTGCATCTAACTGCAACAAGGAATGAATATCCTGCAGAGTGCATGAAGGCTGCCATAAATGCTGTAATCGGTGGGTCAAGTTTGCAACATGCGTCGGAAATGTTCAGTATACCCAAGACTGTCTTATGGAGGAGAATCCAGAAGGAAGGCTATAAGATACTGCGTTCCGAGATGAAGATGACCTATGGCGTTGATAGACGAGAAGCCGCGCTTAAAGCTTTGGAGAGAGGCGAAAAGCTGACCAAAGTTGCGCTCGAATTTAAAATTCCGAAGACCACTTTGTTCAGGGATAAAGCTCGCTTAGTGGACGAGGGAAAGCTGCCATTATCATTTTGGAAGAAACGTAAGACGGAAAATGAAGAGTTGAAAAGGTCCCGTTTAGAAGAAGCGGTTGCTGCCTGTAAAGGAGGAAAGATGTCGCAAGCGGCTGCGTCGATGACCTATCGTATTCCTAAAACTACGATATGGAGACGACTCCAACAAGACGGTAAAAAATCGGAGCGTTTGTTGAACTCAAGGAAACAACGGATAGCGAGTTCTAAACAGAACACGGTAGTAAAGAATCAAGAGGGATCTGATTTCACATACTGCGAGGTATCTTCAGAAATTCCTATAACTTATATAGATGAAAATAGTATAGCTGAGGATTCTGTAATAATATTAACAGCGGATGACATGGATGGATTGAACTTAGAAGAGGGACGACAAATTATTGTTAATTCTGCATCGGTACAAGAATACGTTCCCTGTTCTATAAGCATCGAGGAGAATTCGAATTATTCACAAACAGAAAGTTAG
Protein Sequence: MSEVVAQHEINQSYCFKWNDYHSHLSDVVRQLLEEDCMVDVILAAAGERIHAHRIVLCACSTLFRDVLSQVNEDHPTIILSDISAQDIKSIVEFIYHGEVRVAVENISSLLDAARSLKICGLIEINGLNEIHSVAGTKDYNDNSEEPMTVINETDENVMNALQYGYEDLEDQQEQRFSENSSMIKKKKRRRDTIKREYSDDMLASAIDGLKSGQTLIEASTKHNVPRSTLYMRAKALGVHLTATRNEYPAECMKAAINAVIGGSSLQHASEMFSIPKTVLWRRIQKEGYKILRSEMKMTYGVDRREAALKALERGEKLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKRSRLEEAVAACKGGKMSQAAASMTYRIPKTTIWRRLQQDGKKSERLLNSRKQRIASSKQNTVVKNQEGSDFTYCEVSSEIPITYIDENSIAEDSVIILTADDMDGLNLEEGRQIIVNSASVQEYVPCSISIEENSNYSQTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00118108;
90% Identity: iTF_00864555;
80% Identity: iTF_00184037;